##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527184_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2486972 Sequences flagged as poor quality 0 Sequence length 52 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.58266598900189 34.0 31.0 34.0 31.0 34.0 2 32.81215470057564 34.0 31.0 34.0 31.0 34.0 3 32.921707200563574 34.0 31.0 34.0 31.0 34.0 4 36.45563399990028 37.0 37.0 37.0 35.0 37.0 5 36.327988011123566 37.0 37.0 37.0 35.0 37.0 6 36.48995404853774 37.0 37.0 37.0 35.0 37.0 7 36.550032328470124 37.0 37.0 37.0 35.0 37.0 8 36.66276620725927 37.0 37.0 37.0 35.0 37.0 9 38.66594517348808 39.0 39.0 39.0 39.0 39.0 10 38.146121468195055 39.0 39.0 39.0 37.0 39.0 11 37.8514366064435 39.0 38.0 39.0 35.0 39.0 12 37.49004934514743 39.0 37.0 39.0 35.0 39.0 13 37.369857400887504 39.0 37.0 39.0 35.0 39.0 14 38.25663376990171 40.0 38.0 40.0 35.0 40.0 15 38.321843993418504 40.0 38.0 40.0 35.0 40.0 16 38.327926892622834 40.0 38.0 40.0 35.0 40.0 17 38.28227539353077 40.0 38.0 40.0 35.0 40.0 18 38.27744622778222 40.0 38.0 40.0 34.0 40.0 19 38.22454173187314 40.0 38.0 40.0 34.0 40.0 20 38.214279855181324 40.0 38.0 40.0 34.0 40.0 21 33.948975300083795 40.0 35.0 40.0 10.0 40.0 22 34.78030995121779 40.0 35.0 40.0 18.0 40.0 23 36.85673139866472 40.0 35.0 40.0 31.0 40.0 24 37.61724096612266 40.0 37.0 40.0 34.0 40.0 25 37.88418446206873 40.0 37.0 40.0 34.0 40.0 26 37.95011443635071 40.0 38.0 40.0 34.0 40.0 27 37.9176122610146 40.0 38.0 40.0 34.0 40.0 28 37.834846552353625 40.0 37.0 40.0 34.0 40.0 29 37.80455429333342 40.0 37.0 40.0 34.0 40.0 30 37.70781858420602 40.0 37.0 40.0 34.0 40.0 31 37.57147326146012 40.0 37.0 40.0 33.0 40.0 32 37.50776003911584 40.0 36.0 40.0 33.0 40.0 33 37.16596326778106 40.0 36.0 40.0 33.0 40.0 34 37.07079170975789 40.0 36.0 40.0 32.0 40.0 35 37.01437048748438 39.0 35.0 40.0 32.0 40.0 36 36.963381171963334 39.0 35.0 40.0 32.0 40.0 37 36.87758567446678 39.0 35.0 40.0 32.0 40.0 38 36.81492513787851 39.0 35.0 40.0 32.0 40.0 39 36.67031474419495 39.0 35.0 40.0 31.0 40.0 40 31.759058807256373 38.0 31.0 40.0 9.0 40.0 41 32.70633163541849 37.0 31.0 40.0 15.0 40.0 42 34.55925157179092 37.0 32.0 40.0 25.0 40.0 43 35.459490898972724 37.0 34.0 40.0 29.0 40.0 44 36.115235314269725 38.0 35.0 40.0 30.0 40.0 45 36.33005236890484 39.0 35.0 40.0 31.0 40.0 46 36.3630390691974 39.0 35.0 40.0 31.0 40.0 47 36.279740182036626 38.0 35.0 40.0 31.0 40.0 48 36.1467901528445 38.0 35.0 40.0 31.0 40.0 49 36.01478625412751 38.0 35.0 40.0 31.0 40.0 50 35.87474607675519 37.0 35.0 40.0 31.0 40.0 51 35.70855763555038 37.0 35.0 40.0 30.0 40.0 52 35.32736878420827 37.0 34.0 40.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 5.0 14 25.0 15 19.0 16 37.0 17 116.0 18 254.0 19 492.0 20 889.0 21 1597.0 22 2526.0 23 4103.0 24 6131.0 25 9071.0 26 12679.0 27 17010.0 28 23439.0 29 31078.0 30 41007.0 31 53888.0 32 79610.0 33 91459.0 34 163485.0 35 243151.0 36 317217.0 37 312695.0 38 631278.0 39 443711.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 0.0 100.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 100.0 0.0 7 99.69581483024336 0.22127309837022693 0.05854509017391431 0.024366981212494553 8 99.60055843009089 0.3054316654952287 0.05339826905972403 0.040611635354157585 9 97.55871799119572 1.3221298832475799 0.4522366958695152 0.6669154296871859 10 49.80277220652263 37.418274110042255 5.13628621472216 7.642667468712958 11 34.29700857106553 22.17970286758355 23.904651922096427 19.618636639254483 12 30.280316786839578 15.533387589405912 27.850816173242 26.335479450512512 13 23.906984075413796 17.317243619952297 29.98063508555786 28.79513721907605 14 24.565133825390877 18.4860947368929 30.821939290028194 26.126832147688035 15 26.716062746182907 18.63390500576605 28.820469229247454 25.82956301880359 16 30.903645075215962 19.52816517435661 25.757105427805378 23.811084322622047 17 31.56726332262687 20.64631206141444 23.047062853944475 24.73936176201421 18 29.311789597952853 19.83110384837465 24.838277230302552 26.018829323369946 19 29.225218458430575 20.14292883072266 25.100805316666214 25.531047394180558 20 26.90247417341249 21.869486266833725 25.974558619879918 25.253480939873867 21 33.59820697619435 19.622818431409765 25.09425116165361 21.684723430742284 22 28.86156337908107 19.229327873413933 25.933223212806578 25.975885534698424 23 28.439041533238008 20.99303892444306 25.003216763196367 25.564702779122563 24 28.645075215965438 21.140125421597027 24.921752235248327 25.29304712718921 25 27.30428810617892 20.245141481287284 24.494123777831035 27.956446634702765 26 27.303081819980278 19.828007713798147 25.10104657390594 27.767863892315635 27 26.78260953480779 18.597716419806897 24.52050123604126 30.099172809344054 28 28.565942841334763 22.059436133579307 22.45236375801577 26.922257267070155 29 30.144770427652585 21.0465980316626 23.823428651388117 24.985202889296705 30 29.333301701828567 20.527533080388523 23.47593780710036 26.66322741068255 31 31.285273818925184 20.959544377660865 23.23074003245714 24.52444177095681 32 32.510136825022556 20.372806770643177 23.321291916434923 23.79576448789934 33 31.58346776722858 20.707832657544998 24.72150872627436 22.987190848952057 34 28.310129748143524 22.66414740495671 25.646408564310335 23.37931428258943 35 27.194435643022917 25.73072796959515 25.3548893996394 21.719946987742524 36 28.29883086741628 25.327627331550172 22.98224507553764 23.391296725495906 37 28.87511399404577 26.033666643613195 21.935228864659514 23.15599049768152 38 30.751854061887308 25.13618971182627 21.77318441864243 22.338771807643994 39 29.55425312387916 23.45414423644496 21.76228763331473 25.229315006361148 40 28.459709236774682 28.03059302637907 20.704736522968492 22.804961213877757 41 24.315874887212242 24.185274301439662 23.931913990185656 27.56693682116244 42 24.485760193520473 22.419231097093174 23.842286925626826 29.252721783759526 43 25.559917843867964 21.556052902887526 25.058223413854275 27.825805839390235 44 25.979343555134516 20.621181098942813 25.418541101387547 27.98093424453512 45 26.939667997870504 21.91986882039685 25.07269884823794 26.067764333494708 46 26.896442742419296 22.50564139845563 24.326811882079895 26.27110397704518 47 26.02510201160286 22.62064068272582 24.90068243631211 26.453574869359205 48 27.119444851007568 21.65826555345215 25.380261619350758 25.84202797618952 49 27.055471472939786 21.839329111867762 25.40354294298448 25.70165647220797 50 25.09043125535792 23.16769147380831 24.921832654328234 26.820044616505534 51 24.334491904211227 23.31393357062323 25.37989973349117 26.97167479167437 52 26.13507510337873 21.914802418362573 25.751275044511964 26.198847433746742 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 1.5 4 3.0 5 24.5 6 46.0 7 31.5 8 17.0 9 500.0 10 983.0 11 1949.0 12 2915.0 13 4313.5 14 5455.0 15 5198.0 16 5195.5 17 5193.0 18 5467.0 19 5741.0 20 5747.0 21 5753.0 22 7503.5 23 9254.0 24 9576.5 25 9899.0 26 12789.0 27 15679.0 28 16139.5 29 16600.0 30 20449.0 31 24298.0 32 27171.0 33 30044.0 34 31076.0 35 32108.0 36 39081.5 37 46055.0 38 49851.5 39 58247.5 40 62847.0 41 64878.5 42 66910.0 43 73238.0 44 79566.0 45 86182.0 46 92798.0 47 94771.0 48 96744.0 49 107309.5 50 117875.0 51 130750.0 52 143625.0 53 157296.5 54 170968.0 55 191506.0 56 212044.0 57 231115.5 58 250187.0 59 238179.5 60 226172.0 61 212743.0 62 199314.0 63 173098.0 64 129978.0 65 113074.0 66 93880.0 67 74686.0 68 66505.5 69 58325.0 70 49673.0 71 41021.0 72 38815.5 73 36610.0 74 26724.0 75 16838.0 76 12357.5 77 7877.0 78 5049.5 79 2222.0 80 1645.5 81 1069.0 82 602.5 83 136.0 84 76.0 85 16.0 86 13.5 87 11.0 88 7.0 89 2.5 90 2.0 91 3.0 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2486972.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.285462979740803 #Duplication Level Percentage of deduplicated Percentage of total 1 69.27230775509601 5.739531414260597 2 10.158660956831742 1.6833841856313532 3 4.39398356860458 1.092185645737879 4 2.2912276043916933 0.7593552597739033 5 1.3345746053524539 0.5528784243174973 6 0.8095676020522361 0.40245854378408014 7 0.5684019263596948 0.3296631182926626 8 0.3731642089332699 0.24734705907846957 9 0.3063063612688417 0.22841010150768895 >10 4.12302595767866 9.317795527262723 >50 3.1832508176572425 19.18903824988355 >100 3.0038726409913825 43.81716384460652 >500 0.12300217828514474 6.7501792101264915 >1k 0.05523708932249556 7.545619607307691 >5k 0.002847272645489462 1.7148749437064976 >10k+ 5.694545290978924E-4 0.6301148647223979 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCACTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 13355 0.5369984060938362 No Hit TCACTTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 8155 0.32790879832985653 No Hit TCACTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 8116 0.3263406262716267 No Hit TCACTTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTCACTTGGGAAG 7453 0.2996817012817193 No Hit TCACTTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 6891 0.2770839398272276 No Hit TCACTTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 5731 0.23044087347987835 No Hit TCACTTGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 4923 0.19795156519655227 No Hit TCACTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 4879 0.19618234543854937 No Hit TCACTTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 4861 0.19545857371936637 No Hit TCACTTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 4628 0.1860897509099419 No Hit TCACTTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 4518 0.18166670151493464 No Hit TCACTTGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 3921 0.15766160616203156 No Hit TCACTTGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 3658 0.14708649715396876 No Hit TCACTTGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 3466 0.13936626548268335 No Hit TCACTTGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCAT 3282 0.13196771013103487 No Hit TCACTTGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCT 2818 0.11331048359209511 No Hit TCACTTGGGACATTTTGTTTTTGAGACTGTATTCCCTAGCATATATCTCCTA 2657 0.10683674765940268 No Hit TCACTTGGGAGGACGTGTTTATATTGAGTCACATTCAAGACCTGGGCTGGCC 2561 0.10297663182375998 No Hit TCACTTGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 2522 0.10140845976553013 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 1.608381598184459E-4 0.0 0.0 0.0 0.0 9 3.618858595915032E-4 0.0 0.0 0.0 0.0 10 0.006071640533146332 0.0 0.0 0.0 0.0 11 0.013309357724976397 0.0 0.0 0.0 0.0 12 0.01825513113939361 0.0 0.0 0.0 0.0 13 0.02267818053440087 0.0 0.0 0.0 0.0 14 0.035665861939740376 0.0 0.0 0.0 0.0 15 0.042702531431797384 0.0 0.0 0.0 0.0 16 0.0581832043143228 0.0 0.0 0.0 0.0 17 0.06377233036801379 0.0 0.0 0.0 0.0 18 0.06920061826188634 0.0 0.0 0.0 0.0 19 0.07728273579276325 0.0 0.0 0.0 0.0 20 0.08508338654395788 0.0 0.0 0.0 0.0 21 0.09573891463192992 0.0 0.0 0.0 0.0 22 0.1037406130828976 0.0 0.0 0.0 0.0 23 0.11190314969368373 0.0 0.0 0.0 0.0 24 0.12593627913784314 0.0 0.0 0.0 0.0 25 0.13236980553058098 0.0 0.0 0.0 0.0 26 0.14000961812195714 0.0 0.0 0.0 0.0 27 0.1479308974930156 0.0 0.0 0.0 0.0 28 0.16815629609018518 0.0 0.0 0.0 0.0 29 0.17515275604228756 0.0 0.0 0.0 0.0 30 0.1856876555103958 0.0 0.0 0.0 0.0 31 0.19421207798077342 0.0 0.0 0.0 0.0 32 0.2035809007901979 0.0 0.0 0.0 0.0 33 0.21126092292152868 0.0 0.0 0.0 0.0 34 0.21857905919326795 0.0 0.0 0.0 0.0 35 0.24206143052676105 0.0 0.0 0.0 0.0 36 0.2538830352734168 0.0 0.0 0.0 0.0 37 0.2650210778408442 0.0 0.0 0.0 0.0 38 0.27531472006922475 0.0 0.0 0.0 0.0 39 0.28480417149851306 0.0 0.0 0.0 0.0 40 0.29533907096662126 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCATA 20 6.312878E-4 46.0 26 ATAGCCG 30 1.8622832E-6 46.0 23 CACGATA 30 1.8622832E-6 46.0 45 GTAATCG 65 0.0 46.0 14 TACGATA 20 6.312878E-4 46.0 34 CGAATAC 30 1.8622832E-6 46.0 34 CATACGC 30 1.8622832E-6 46.0 18 TCGACTA 50 1.6370905E-11 46.0 28 TATCGTA 30 1.8622832E-6 46.0 26 CGATAGT 40 5.6152203E-9 46.0 19 TACCGTA 60 0.0 46.0 40 CATTTCG 130 0.0 44.23077 12 TTGGGAT 28045 0.0 43.433052 5 TCACTTG 264620 0.0 43.09436 1 CACTTGG 263905 0.0 43.02984 2 TTGGGAC 17305 0.0 42.92979 5 TTGGGAG 33965 0.0 42.918888 5 ACTTGGG 258725 0.0 42.863693 3 CTTGGGA 96705 0.0 42.85342 4 CTTGGGG 131485 0.0 42.644943 4 >>END_MODULE