##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527177_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1300446 Sequences flagged as poor quality 0 Sequence length 50 %GC 58 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.42200598871464 33.0 31.0 34.0 31.0 34.0 2 32.710078696078114 34.0 31.0 34.0 31.0 34.0 3 33.045903482343746 34.0 31.0 34.0 31.0 34.0 4 36.26696379549785 37.0 37.0 37.0 35.0 37.0 5 36.023978696539494 37.0 35.0 37.0 35.0 37.0 6 36.065026921533075 37.0 37.0 37.0 35.0 37.0 7 36.48371251093855 37.0 37.0 37.0 35.0 37.0 8 36.65804731607464 37.0 37.0 37.0 35.0 37.0 9 38.746503122774804 39.0 39.0 39.0 39.0 39.0 10 38.20373164283638 39.0 39.0 39.0 37.0 39.0 11 37.783416612454495 39.0 38.0 39.0 35.0 39.0 12 37.09928209245136 39.0 37.0 39.0 33.0 39.0 13 37.046231831233285 39.0 37.0 39.0 33.0 39.0 14 37.82955770558716 40.0 37.0 40.0 33.0 40.0 15 37.782562290168144 40.0 37.0 40.0 33.0 40.0 16 37.61391399565995 40.0 37.0 40.0 33.0 40.0 17 37.55416603226893 40.0 37.0 40.0 33.0 40.0 18 37.50842633988647 40.0 36.0 40.0 33.0 40.0 19 37.390529095402655 39.0 36.0 40.0 33.0 40.0 20 37.07255357008288 39.0 35.0 40.0 32.0 40.0 21 37.13519131128859 39.0 35.0 40.0 33.0 40.0 22 36.931317409565644 39.0 35.0 40.0 32.0 40.0 23 36.913867242469124 39.0 35.0 40.0 33.0 40.0 24 36.89728985286586 39.0 35.0 40.0 33.0 40.0 25 36.80728150188474 38.0 35.0 40.0 33.0 40.0 26 36.5896207916361 38.0 35.0 40.0 32.0 40.0 27 36.37345033934512 38.0 35.0 40.0 32.0 40.0 28 36.08576596029362 37.0 35.0 40.0 31.0 40.0 29 36.24156789286137 37.0 35.0 40.0 32.0 40.0 30 36.184197575293396 37.0 35.0 40.0 32.0 40.0 31 36.07132706779059 37.0 35.0 40.0 32.0 40.0 32 35.346948662228186 36.0 35.0 40.0 30.0 40.0 33 35.44795862342612 36.0 35.0 40.0 30.0 40.0 34 35.32377814995778 36.0 34.0 40.0 30.0 40.0 35 35.26915612028489 35.0 34.0 39.0 30.0 40.0 36 35.11951207508808 35.0 34.0 39.0 30.0 40.0 37 35.05014894889907 35.0 34.0 39.0 30.0 40.0 38 34.816540632982836 35.0 34.0 39.0 30.0 40.0 39 34.784132520689056 35.0 34.0 39.0 30.0 40.0 40 34.65997819209717 35.0 34.0 38.0 30.0 40.0 41 34.47572602015001 35.0 34.0 38.0 29.0 40.0 42 34.373494939428475 35.0 34.0 37.0 29.0 40.0 43 34.32600815412558 35.0 34.0 37.0 29.0 40.0 44 34.141203863905154 35.0 34.0 37.0 29.0 40.0 45 34.061947208880646 35.0 34.0 37.0 29.0 40.0 46 33.75733171542686 35.0 34.0 36.0 28.0 40.0 47 33.68996790331932 35.0 34.0 36.0 28.0 39.0 48 33.560534616585386 35.0 33.0 36.0 27.0 39.0 49 33.325542929118164 35.0 33.0 36.0 27.0 39.0 50 32.99866661130105 35.0 33.0 35.0 26.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 1.0 15 12.0 16 37.0 17 117.0 18 261.0 19 539.0 20 1035.0 21 1641.0 22 2263.0 23 3564.0 24 5196.0 25 6895.0 26 8969.0 27 11447.0 28 15101.0 29 19452.0 30 24921.0 31 32541.0 32 41740.0 33 60614.0 34 121074.0 35 192543.0 36 229886.0 37 227029.0 38 225004.0 39 68562.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 100.0 0.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 99.39551507713507 0.5385075581761949 0.027990397140673275 0.03798696754805659 8 99.52185634774531 0.4103207668753643 0.02199245489624329 0.04583043048308042 9 98.08750228767668 1.0670185459450066 0.23407354092365237 0.6114056254546517 10 58.75299704870483 31.119477471575134 3.5909987804184107 6.536526699301624 11 36.14621445258012 22.99641815192634 22.524503132002405 18.332864263491143 12 30.488463188782926 14.714413362800146 27.288945484856736 27.508177963560193 13 24.534044473972774 16.574159942050652 29.97786913105196 28.91392645292461 14 23.954781667212632 17.008549374599177 32.906249086851744 26.130419871336446 15 26.888851978475074 18.132317681779945 29.722725895577362 25.256104444167615 16 30.922929518026894 19.444021512619518 24.94105868294416 24.691990286409432 17 30.455628299829446 19.2217131660984 24.831096408462944 25.491562125609214 18 30.27161450763815 19.11705676360264 24.556344515650785 26.05498421310843 19 28.42578623026254 22.03236428117738 24.189931761872465 25.35191772668761 20 29.738643511533734 20.830468931428143 23.660113530281148 25.770774026756975 21 29.053109471673565 20.412919875181284 26.091433246747652 24.442537406397495 22 28.551819914091013 18.070262048558725 27.16337318120091 26.214544856149352 23 28.532288153448892 20.04827574539812 25.62889962366757 25.790536477485414 24 29.18498730435558 19.97045628961141 23.91987056748223 26.924685838550772 25 28.58119445174963 21.346061274362796 22.270744037045752 27.802000236841824 26 27.22266053338624 21.077307323795065 23.07339174406319 28.626640398755505 27 26.426933528958525 19.090527403675356 24.215538361454456 30.267000705911663 28 26.40009658224948 22.542112475258488 22.81701816146153 28.24077278103051 29 29.65059679525332 20.890371457176997 23.02164026803112 26.437391479538558 30 27.67596655301335 19.29384226642244 25.65888933488972 27.371301845674484 31 30.4063375180515 20.059656456323445 24.051594606773367 25.482411418851687 32 33.225524166324476 20.788252645630806 22.529347623815212 23.456875564229502 33 32.60004644560405 19.25231805088408 24.017452473997384 24.13018302951449 34 28.611337956362664 21.5895162121303 26.7548210383207 23.044324793186338 35 27.374300816796698 24.70229444359858 26.2673728859176 21.656031853687118 36 29.680970989952677 23.84951009115334 24.17862794764258 22.2908909712514 37 29.807389157258356 24.731053807693666 22.501511020065422 22.960046014982552 38 29.449511936674032 25.30585660611821 21.614430741453315 23.63020071575444 39 30.247468945269546 21.451409747117527 22.371478708074 25.929642599538926 40 28.809731430601502 21.373052014462733 21.82897252173485 27.988244033200914 41 25.670808322683143 23.164206741379495 23.368598157862763 27.7963867780746 42 24.907685517122587 21.04962451343616 24.131567170032437 29.91112279940882 43 25.659658301844136 20.245054389032685 25.93110363675231 28.164183672370864 44 25.213657468283955 20.21206570668832 24.933138323313695 29.641138501714025 45 28.193096829856835 20.711740433666602 23.254714151914037 27.840448584562527 46 26.82125978318208 22.789719834579827 23.630815889317972 26.75820449292012 47 25.79937959746118 20.994181996022903 25.728942224436846 27.47749618207907 48 27.4758813514748 22.009679756022166 24.78457390772089 25.729864984782143 49 26.76474071203264 22.030441863791346 25.300781424219075 25.904035999956935 50 25.074320656144124 21.967694160311154 25.22188541469619 27.736099768848533 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.5 8 1.0 9 0.5 10 0.0 11 0.5 12 1.0 13 229.0 14 457.0 15 977.5 16 1498.0 17 2366.0 18 3234.0 19 3139.5 20 3045.0 21 3406.5 22 3768.0 23 3661.5 24 3555.0 25 3208.5 26 2862.0 27 3886.5 28 4911.0 29 4482.5 30 4054.0 31 6074.5 32 8095.0 33 10011.0 34 11927.0 35 10697.5 36 9468.0 37 13400.5 38 17333.0 39 18753.0 40 20173.0 41 22898.5 42 25624.0 43 25884.0 44 26144.0 45 31213.0 46 36282.0 47 36738.0 48 37194.0 49 42871.5 50 48549.0 51 51664.5 52 54780.0 53 59991.5 54 65203.0 55 69468.0 56 73733.0 57 77447.0 58 81161.0 59 95225.0 60 109289.0 61 115408.5 62 121528.0 63 124912.0 64 128296.0 65 131087.0 66 133878.0 67 111523.5 68 89169.0 69 73616.0 70 58063.0 71 47196.0 72 36329.0 73 33628.0 74 30927.0 75 26086.5 76 21246.0 77 19562.5 78 17879.0 79 12425.0 80 6971.0 81 4525.5 82 2080.0 83 1593.5 84 1107.0 85 712.0 86 317.0 87 287.0 88 257.0 89 149.5 90 42.0 91 26.0 92 10.0 93 8.0 94 6.0 95 3.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1300446.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.79990028037635 #Duplication Level Percentage of deduplicated Percentage of total 1 68.64808057796108 6.0409626352529795 2 11.763734921577605 2.070393884693277 3 4.855148810953446 1.281744761483344 4 2.3276101469809505 0.8193094874009802 5 1.3622897487937096 0.5994006971181797 6 0.8054359055731829 0.42526533907671793 7 0.5275081147337293 0.32494131647223007 8 0.36996281595998914 0.2604508710316106 9 0.2672936000472937 0.21169413233990855 >10 3.323468177413135 7.965400002466799 >50 2.7198449267484737 17.630272259203362 >100 2.8579171065638858 45.6263906704538 >500 0.12302585252783528 7.23810064318911 >1k 0.04690913801421057 7.6369547880883 >5k 8.850780757398222E-4 0.6987930849512838 >10k+ 8.850780757398222E-4 1.1699254267781134 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAACGCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 15021 1.1550652622254212 No Hit GAACGCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 8972 0.6899171515003314 No Hit GAACGCGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTT 4826 0.37110345220024515 No Hit GAACGCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 3737 0.28736295086454955 No Hit GAACGCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 3603 0.2770587936754006 No Hit GAACGCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 3574 0.2748287895075997 No Hit GAACGCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 3427 0.2635249752777124 No Hit GAACGCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 3144 0.24176321046779337 No Hit GAACGCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 3117 0.23968699969087529 No Hit GAACGCGGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTC 3039 0.2336890574464453 No Hit GAACGCGGGATGCCTACTAACCAGAGCTGAACTAAGGCTGCTCCATCAAC 2932 0.2254611110342144 No Hit GAACGCGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGA 2866 0.22038592913508134 No Hit GAACGCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 2780 0.21377281332712006 No Hit GAACGCGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 2707 0.20815935455989715 No Hit GAACGCGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC 2518 0.19362587912147064 No Hit GAACGCGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCC 2311 0.17770826316509875 No Hit GAACGCGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATC 2100 0.1614830604269612 No Hit GAACGCGGGAACTTAGCTTATTCAACCAAATGGTATGAATCTACTTCTAT 2019 0.155254428096207 No Hit GAACGCGGGAGTGCAGTGTTGAACGCGGGGTGCAGTGCTGAACGCGGGGG 1902 0.14625751472956203 No Hit GAACGCGGGTGCTGTGTTAATTGAGGACGTTCCCTTCACAGAGAAAGATT 1878 0.14441199403896818 No Hit GAACGCGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTA 1875 0.14418130395264392 No Hit GAACGCGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAA 1761 0.1354150806723232 No Hit GAACGCGGGGATCTTGACTCCCTGACCTTGGACTGGTCCTCGTCCGTGGT 1716 0.13195472937745975 No Hit GAACGCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 1699 0.13064748555495576 No Hit GAACGCGGGGTCAAGGAAAGTATACCCCAAGTGGCCAGTCTGGAGCCGCA 1659 0.12757161773729936 No Hit GAACGCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTG 1585 0.121881262274635 No Hit GAACGCGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 1551 0.11926677462962705 No Hit GAACGCGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 1551 0.11926677462962705 No Hit GAACGCGGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAA 1494 0.11488366298946669 No Hit GAACGCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 1452 0.11165400178092748 No Hit GAACGCGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTC 1409 0.10834744387694684 No Hit GAACGCGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCT 1389 0.10680950996811862 No Hit GAACGCGGGAGGAACCTTTTTTTTTTGAAGATTTGAAACGAACTCGACTT 1333 0.10250329502339967 No Hit GAACGCGGGACTGTCAGGGTTGTCCAGCCCACCTTGTCTCTGTCGCAGCA 1325 0.10188812145986838 No Hit GAACGCGGGGCTCTTTCTTGACTCCATCTTCGCGGTAGCAGCAGCGGCGT 1320 0.10150363798266132 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 1.537933908828202E-4 0.0 0.0 0.0 0.0 8 3.075867817656404E-4 0.0 0.0 0.0 0.0 9 3.844834772070505E-4 0.0 0.0 0.0 0.0 10 0.003229661208539224 0.0 0.0 0.0 0.0 11 0.006228632330754218 0.0 0.0 0.0 0.0 12 0.00784346293502383 0.0 0.0 0.0 0.0 13 0.012380367966067026 0.0 0.0 0.0 0.0 14 0.018224516819614196 0.0 0.0 0.0 0.0 15 0.02299211193698162 0.0 0.0 0.0 0.0 16 0.03022040130847417 0.0 0.0 0.0 0.0 17 0.033680752603337624 0.0 0.0 0.0 0.0 18 0.03721800059364249 0.0 0.0 0.0 0.0 19 0.04313904614263107 0.0 0.0 0.0 0.0 20 0.04844491812808836 0.0 0.0 0.0 0.0 21 0.052289752900158866 0.0 0.0 0.0 0.0 22 0.054519757067959765 0.0 0.0 0.0 0.0 23 0.05944114557621001 0.0 0.0 0.0 0.0 24 0.06513150103887436 0.0 0.0 0.0 0.0 25 0.06966840606991755 0.0 0.0 0.0 0.0 26 0.07574324500978895 0.0 0.0 0.0 0.0 27 0.08051084012715637 0.0 0.0 0.0 0.0 28 0.08697016254423483 0.0 0.0 0.0 0.0 29 0.09081499731630532 0.0 0.0 0.0 0.0 30 0.09550569573823134 0.0 0.0 0.0 0.0 31 0.10334915867325517 0.0 0.0 0.0 0.0 32 0.10988537778577503 0.0 0.0 0.0 0.0 33 0.11549883655299797 0.0 0.0 0.0 0.0 34 0.12157367549286938 0.0 0.0 0.0 0.0 35 0.1324930062455496 0.0 0.0 7.68966954414101E-5 0.0 36 0.14379682047543688 0.0 0.0 1.537933908828202E-4 0.0 37 0.1491026924608942 0.0 0.0 1.537933908828202E-4 0.0 38 0.155254428096207 0.0 0.0 1.537933908828202E-4 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCGCAC 65 0.0 44.000004 23 GCATAAG 20 7.856864E-4 44.0 44 AACCGTT 20 7.856864E-4 44.0 28 AACCGTC 40 8.314601E-9 44.0 25 CGGGTAT 195 0.0 44.0 6 CAACGTA 20 7.856864E-4 44.0 22 CCGATTT 100 0.0 44.0 32 CGAAAGG 55 1.8189894E-12 44.0 22 CGTGCTA 25 4.4431632E-5 44.0 16 GTTTACG 35 1.4462785E-7 44.0 25 CGCATCG 45 4.802132E-10 44.0 42 ACCGATT 100 0.0 44.0 31 GAATCGT 20 7.856864E-4 44.0 32 TACGGTT 70 0.0 44.0 26 TACGGTC 20 7.856864E-4 44.0 44 TCGATCT 50 2.7284841E-11 44.0 13 CGTTATA 20 7.856864E-4 44.0 37 CGTTAGT 20 7.856864E-4 44.0 34 CGTTAGG 25 4.4431632E-5 44.0 21 TAGCACG 20 7.856864E-4 44.0 34 >>END_MODULE