##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527173_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2735901 Sequences flagged as poor quality 0 Sequence length 52 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.51872819959494 33.0 31.0 34.0 31.0 34.0 2 32.80472831436518 34.0 31.0 34.0 31.0 34.0 3 32.940078606645486 34.0 31.0 34.0 31.0 34.0 4 36.45049181238649 37.0 37.0 37.0 35.0 37.0 5 36.34078828144732 37.0 37.0 37.0 35.0 37.0 6 36.26739417837122 37.0 37.0 37.0 35.0 37.0 7 36.601100697722615 37.0 37.0 37.0 35.0 37.0 8 36.62138213334474 37.0 37.0 37.0 35.0 37.0 9 38.6834117901196 39.0 39.0 39.0 38.0 39.0 10 38.05504365837799 39.0 38.0 39.0 37.0 39.0 11 36.60254629096594 38.0 35.0 39.0 33.0 39.0 12 36.414918522271094 39.0 35.0 39.0 33.0 39.0 13 36.383500718776006 38.0 35.0 39.0 33.0 39.0 14 36.99129829624683 39.0 35.0 40.0 33.0 40.0 15 36.87295629483669 39.0 35.0 40.0 33.0 40.0 16 31.96607662338659 38.0 33.0 40.0 3.0 40.0 17 33.245010327493574 38.0 32.0 40.0 17.0 40.0 18 35.13433929078574 37.0 33.0 40.0 27.0 40.0 19 36.07920681340443 38.0 34.0 40.0 30.0 40.0 20 36.47202000364779 39.0 35.0 40.0 31.0 40.0 21 36.74301189991889 39.0 35.0 40.0 32.0 40.0 22 36.83282180166607 39.0 35.0 40.0 32.0 40.0 23 36.940278906290835 39.0 35.0 40.0 33.0 40.0 24 37.039273350899755 39.0 35.0 40.0 33.0 40.0 25 37.02726231687477 39.0 35.0 40.0 33.0 40.0 26 36.89636832619309 39.0 35.0 40.0 33.0 40.0 27 36.801606856388446 38.0 35.0 40.0 33.0 40.0 28 36.692899706531776 38.0 35.0 40.0 33.0 40.0 29 36.51980426192322 38.0 35.0 40.0 32.0 40.0 30 36.37269696527762 38.0 35.0 40.0 32.0 40.0 31 36.334329348905534 38.0 35.0 40.0 32.0 40.0 32 36.31820303439342 38.0 35.0 40.0 32.0 40.0 33 35.952784110243755 38.0 35.0 40.0 31.0 40.0 34 35.389680035936976 38.0 34.0 40.0 27.0 40.0 35 35.423946992234 37.0 34.0 40.0 29.0 40.0 36 35.71818315063301 37.0 34.0 40.0 30.0 40.0 37 35.73872263652815 37.0 34.0 40.0 31.0 40.0 38 35.81331853747632 37.0 34.0 40.0 31.0 40.0 39 35.45279160320494 37.0 34.0 40.0 30.0 40.0 40 35.47672923837522 36.0 34.0 40.0 30.0 40.0 41 35.47859626499643 36.0 34.0 40.0 30.0 40.0 42 35.427275329041514 36.0 34.0 40.0 30.0 40.0 43 35.38830169658917 36.0 34.0 40.0 30.0 40.0 44 35.62367973110138 36.0 35.0 40.0 31.0 40.0 45 35.623354792443145 36.0 35.0 40.0 31.0 40.0 46 35.51504349024325 36.0 35.0 40.0 31.0 40.0 47 35.215992099129316 35.0 35.0 40.0 30.0 40.0 48 35.195751966171294 35.0 35.0 40.0 30.0 40.0 49 35.163234707688616 35.0 34.0 40.0 30.0 40.0 50 34.76266429231175 35.0 34.0 40.0 29.0 40.0 51 34.887687091016815 35.0 34.0 40.0 29.0 40.0 52 34.58941167827344 35.0 34.0 39.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 1.0 13 4.0 14 12.0 15 49.0 16 129.0 17 341.0 18 655.0 19 1176.0 20 2038.0 21 3210.0 22 4881.0 23 7067.0 24 10145.0 25 13833.0 26 18634.0 27 24605.0 28 32790.0 29 43778.0 30 59020.0 31 81057.0 32 117267.0 33 196795.0 34 357863.0 35 261955.0 36 225772.0 37 386993.0 38 561333.0 39 324496.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 0.0 100.0 3 0.0 100.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 99.3266934731922 0.6325886791956288 0.027120864388002347 0.013596983224173681 8 99.43923409509335 0.4589712858762068 0.06663252800448555 0.03516209102595452 9 97.62250169139892 1.2214257752747633 0.578054542178244 0.5780179911480715 10 56.308689532260125 31.31907916258666 4.499212508054933 7.873018797098287 11 44.06486199610293 16.840923703014106 21.853495429841942 17.24071887104102 12 41.86255277511869 13.049668098370518 23.850643718467886 21.23713540804291 13 30.371310950213477 12.900357140115815 26.02495485033998 30.703377059330727 14 23.213705466681724 15.872211750352077 35.5118112826451 25.4022715003211 15 30.929701038158907 16.57260259051771 31.718655024432536 20.779041346890843 16 36.51670875517791 26.76237188407037 21.98171644368711 14.739202917064617 17 33.24232126820378 21.306107201978435 25.662697590300233 19.788873939517547 18 33.33326023127299 21.64870000778537 25.606811065166468 19.411228695775176 19 29.48619120355598 28.987415845821907 22.96998319749143 18.556409753130687 20 32.65352072315482 26.100980993098798 24.100872071028885 17.144626212717494 21 29.956895370117557 27.951705854853664 24.190202788770502 17.901195986258276 22 25.344045709256292 23.67947524417002 32.758897343142166 18.21758170343152 23 31.23742416118127 20.443758747118405 29.85484489387591 18.46397219782441 24 37.339435893330936 19.19506590333495 24.277084587490556 19.188413615843555 25 30.077038606294597 19.12861613048133 21.566240883716187 29.228104379507887 26 23.32748882360875 20.145794749152106 29.032958429416855 27.49375799782229 27 20.55622626695922 17.703418361994824 28.919504031761385 32.82085133928457 28 20.59858891092916 27.366889372093507 24.531808716762775 27.502713000214555 29 31.347260006849666 25.20847793834645 21.347885029465612 22.09637702533827 30 29.48827461227581 20.23377307877734 28.64566371370894 21.63228859523791 31 33.771836042312934 18.918118747717845 26.70505986875987 20.60498534120935 32 37.95327389404807 18.467115586419244 25.384617352747778 18.194993166784908 33 36.44166949023375 17.98953982618523 27.999989765711554 17.56880091786947 34 26.299562740026044 20.04677800841478 36.56250719598407 17.091152055575108 35 21.82944485198843 29.77560226046191 32.086212183847294 16.308740703702362 36 21.280009766435263 38.1336532279494 23.931896658541373 16.65444034707396 37 30.13924845964821 31.750490971712793 21.2658645177585 16.844396050880498 38 28.388563767475507 31.790185390480136 21.376065873728617 18.44518496831574 39 31.870049391407072 27.46828192979205 20.71405361524412 19.94761506355676 40 27.12473879720063 23.401139149406355 20.254460961854978 29.219661091538036 41 20.15438424124265 28.98730619273139 21.776701715449498 29.081607850576464 42 18.492153042087413 26.65202432397956 22.584442931231795 32.27137970270123 43 20.688943057515605 21.324346166034516 24.883210320841286 33.10350045560859 44 23.365136384686434 20.393427978570863 23.996847839157923 32.24458779758478 45 26.871038096773237 23.95602033845523 22.458890142589226 26.71405142218231 46 24.126201934938436 28.585208309803605 21.68835787552254 25.600231879735414 47 21.50074143764705 23.958030645114718 25.907552941425877 28.633674975812358 48 23.609662776540524 20.945019574904208 30.8472784651199 24.598039183435365 49 28.53443892889399 20.645301127489628 26.646285812242475 24.173974131373907 50 23.393390331009783 19.312650567399917 29.01570634317543 28.27825275841487 51 20.363054072497505 19.930107120104125 32.40230549277916 27.304533314619206 52 19.199744435197033 21.30387758913791 31.571281270776975 27.92509670488808 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 24.0 6 48.0 7 115.5 8 183.0 9 712.0 10 1241.0 11 3889.0 12 6537.0 13 7683.5 14 8957.0 15 9084.0 16 10363.5 17 11643.0 18 12742.0 19 13841.0 20 13079.5 21 12318.0 22 12966.0 23 13614.0 24 15487.0 25 17360.0 26 19174.0 27 20988.0 28 23985.0 29 26982.0 30 29350.0 31 31718.0 32 35455.5 33 39193.0 34 41187.5 35 43182.0 36 50245.0 37 57308.0 38 62236.5 39 68593.5 40 70022.0 41 74752.5 42 79483.0 43 85135.5 44 90788.0 45 96597.5 46 102407.0 47 106819.0 48 111231.0 49 124644.5 50 138058.0 51 148039.5 52 158021.0 53 175278.0 54 192535.0 55 221447.5 56 250360.0 57 259119.0 58 267878.0 59 273668.0 60 279458.0 61 283911.5 62 288365.0 63 215945.0 64 109800.5 65 76076.0 66 59431.0 67 42786.0 68 33882.5 69 24979.0 70 22044.0 71 19109.0 72 15289.0 73 11469.0 74 8299.0 75 5129.0 76 3534.0 77 1939.0 78 1217.0 79 495.0 80 434.0 81 373.0 82 221.5 83 70.0 84 53.5 85 37.0 86 30.5 87 24.0 88 20.5 89 16.0 90 15.0 91 16.0 92 17.0 93 8.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2735901.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.962163057029996 #Duplication Level Percentage of deduplicated Percentage of total 1 69.17596949365453 5.507903487366102 2 10.616310451173955 1.6905758975259744 3 4.391439394096398 1.048960695325816 4 2.384373392887765 0.7593907897206493 5 1.342920583662647 0.5346276329881944 6 0.8625968268884489 0.4120881952897504 7 0.5512371811267476 0.30723282234601196 8 0.4068968216525003 0.25918230731075687 9 0.3066401724762156 0.21973671477822868 >10 4.357370738044908 9.257974034565713 >50 2.685476833912515 15.460283477721315 >100 2.6865276955165784 39.428893755409845 >500 0.15920553329581913 8.413067008348701 >1k 0.06778057358138834 9.515269235133427 >5k 0.002627154014782494 1.3512498945919638 >10k+ 0.002627154014782494 5.833564051577554 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TCAAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 59723 2.1829371749928086 No Hit TCAAAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 41506 1.5170870583401959 No Hit TCAAAGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 17138 0.6264115550964746 No Hit TCAAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 10594 0.38722161364756985 No Hit TCAAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 10479 0.38301824517773125 No Hit TCAAAGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCT 8316 0.30395836691459227 No Hit TCAAAGGGGGGGCTGATGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 7077 0.2586716405308525 No Hit TCAAAGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCT 5991 0.21897722176350679 No Hit TCAAAGGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTC 5618 0.2053436875091606 No Hit TCAAAGGGGGGAGCTGAAGAGATGGCTGAGCGGTTAAGAGCACTGACTGCTC 5297 0.19361080682378493 No Hit TCAAAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGCT 4926 0.18005037462978374 No Hit TCAAAGGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 4845 0.17708974118581045 No Hit TCAAAGGGGGGGGCTAGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 4822 0.17624906749184271 No Hit TCAAAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 4138 0.15124816285384596 No Hit TCAAAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 4025 0.14711789644435233 No Hit TCAAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGCTC 3974 0.14525379390555432 No Hit TCAAAGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 3786 0.13838220023312248 No Hit TCAAAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTT 3750 0.13706636314691212 No Hit TCAAAGGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTC 3620 0.13231472922448584 No Hit TCAAAGGGGGGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACCCGACTGC 3436 0.125589339672744 No Hit TCAAAGGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTT 3115 0.11385645898736832 No Hit TCAAAGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCTT 3060 0.1118461523278803 No Hit TCAAAGGGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 2975 0.10873931476321694 No Hit TCAAAGGGGGCTCTTTCCAGCCAGCGCCGAGCGATGGGCATCTCTCGGGACA 2816 0.10292770096578788 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.005848164827601584 0.0 0.0 0.0 0.0 6 0.005848164827601584 0.0 0.0 0.0 0.0 7 0.005921266887946603 0.0 0.0 0.0 0.0 8 0.006396430280189232 0.0 0.0 0.0 0.0 9 0.007566063245709549 0.0 0.0 0.0 0.0 10 0.014985922370729057 0.0 0.0 0.0 0.0 11 0.02152855677160833 0.0 0.0 0.0 0.0 12 0.026389843784552145 0.0 0.0 0.0 0.0 13 0.03296902921560393 0.0 0.0 0.0 0.0 14 0.04733358407340032 0.0 0.0 0.0 0.0 15 0.055557565862215046 0.0 0.0 0.0 0.0 16 0.07131105986656681 0.0 0.0 0.0 0.0 17 0.08289773643125245 0.0 0.0 0.0 0.0 18 0.09254720839679506 0.0 0.0 0.0 0.0 19 0.10881241682356196 0.0 0.0 0.0 0.0 20 0.1174019089141018 0.0 0.0 0.0 0.0 21 0.13107199419862048 0.0 0.0 0.0 0.0 22 0.13969803731933284 0.0 0.0 0.0 0.0 23 0.14572895729779695 0.0 0.0 0.0 0.0 24 0.1536605308452316 0.0 0.0 0.0 0.0 25 0.1592162874314531 0.0 0.0 0.0 0.0 26 0.1632734517806017 0.0 0.0 0.0 0.0 27 0.17069331090562123 0.0 0.0 0.0 0.0 28 0.17833247621167578 0.0 0.0 0.0 0.0 29 0.18370547764703474 0.0 0.0 0.0 0.0 30 0.18926123423325625 0.0 0.0 0.0 0.0 31 0.19478043978930523 0.0 0.0 0.0 0.0 32 0.20040929843587177 0.0 0.0 0.0 0.0 33 0.20578229987123073 0.0 0.0 0.0 0.0 34 0.2119594239703849 0.0 0.0 0.0 0.0 35 0.2241309170178307 0.0 0.0 0.0 0.0 36 0.23867822702648964 0.0 0.0 0.0 0.0 37 0.2496800871084151 0.0 0.0 0.0 0.0 38 0.256697884901537 0.0 0.0 0.0 0.0 39 0.2618515801558609 0.0 0.0 0.0 0.0 40 0.2686866227981203 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATTTCG 25 3.4184006E-5 46.0 14 CGACGAA 30 1.8623523E-6 46.0 10 CCGCTAA 40 5.6170393E-9 46.0 17 ATATCGT 30 1.8623523E-6 46.0 23 TGCGATA 20 6.312989E-4 46.0 19 CGCTAGT 20 6.312989E-4 46.0 14 AACGCGT 20 6.312989E-4 46.0 37 TCGTACA 20 6.312989E-4 46.0 35 TTACGCG 25 3.4184006E-5 46.0 32 ACGTATT 25 3.4184006E-5 46.0 16 ATTATCG 25 3.4184006E-5 46.0 13 CGATAGC 165 0.0 46.0 33 TCGGTCG 20 6.312989E-4 46.0 32 TACGTAT 20 6.312989E-4 46.0 44 AGGGGAT 29550 0.0 44.20203 5 CAAAGGG 281670 0.0 44.12355 2 TCAAAGG 283425 0.0 44.09946 1 AAAGGGG 275665 0.0 44.033447 3 AAGGGGA 87605 0.0 44.030933 4 AAGGGGG 155830 0.0 43.814095 4 >>END_MODULE