##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527172_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2657198 Sequences flagged as poor quality 0 Sequence length 52 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.495072252801634 33.0 31.0 34.0 31.0 34.0 2 32.79857805101464 34.0 31.0 34.0 31.0 34.0 3 32.91707204355867 34.0 31.0 34.0 31.0 34.0 4 36.45416186524301 37.0 37.0 37.0 35.0 37.0 5 36.35729516581 37.0 37.0 37.0 35.0 37.0 6 36.24902397186811 37.0 37.0 37.0 35.0 37.0 7 36.60312780605736 37.0 37.0 37.0 35.0 37.0 8 36.64618293405309 37.0 37.0 37.0 35.0 37.0 9 38.632275050636046 39.0 39.0 39.0 38.0 39.0 10 38.04830802973659 39.0 38.0 39.0 37.0 39.0 11 36.52431508679444 38.0 35.0 39.0 33.0 39.0 12 36.37374030840005 38.0 35.0 39.0 33.0 39.0 13 36.29156276649312 38.0 35.0 39.0 33.0 39.0 14 36.92216387337338 39.0 35.0 40.0 33.0 40.0 15 36.980865558381424 39.0 35.0 40.0 33.0 40.0 16 37.07371110470503 39.0 35.0 40.0 33.0 40.0 17 36.80850655464892 39.0 35.0 40.0 32.0 40.0 18 36.76582136521253 39.0 35.0 40.0 32.0 40.0 19 36.73284941506053 39.0 35.0 40.0 32.0 40.0 20 36.775145849123774 39.0 35.0 40.0 32.0 40.0 21 32.63411420601702 37.0 32.0 40.0 10.0 40.0 22 33.28647846340393 37.0 32.0 40.0 16.0 40.0 23 35.42007897040416 37.0 34.0 40.0 29.0 40.0 24 36.408177712010925 38.0 35.0 40.0 31.0 40.0 25 36.74968368936 38.0 35.0 40.0 33.0 40.0 26 36.79051090660162 38.0 35.0 40.0 33.0 40.0 27 36.78428555192349 38.0 35.0 40.0 33.0 40.0 28 36.68408790011132 38.0 35.0 40.0 33.0 40.0 29 36.66992297901775 38.0 35.0 40.0 33.0 40.0 30 36.457464968737746 38.0 35.0 40.0 32.0 40.0 31 36.32109011071061 38.0 35.0 40.0 32.0 40.0 32 36.33235536079735 38.0 35.0 40.0 32.0 40.0 33 35.99270848465188 38.0 35.0 40.0 31.0 40.0 34 35.42405119979768 38.0 34.0 40.0 27.0 40.0 35 35.450419953650425 38.0 34.0 40.0 29.0 40.0 36 35.67375709299796 37.0 34.0 40.0 30.0 40.0 37 35.901834187742125 37.0 34.0 40.0 31.0 40.0 38 35.90970488461906 37.0 34.0 40.0 31.0 40.0 39 35.76111377473564 37.0 34.0 40.0 31.0 40.0 40 31.001208792118614 35.0 31.0 40.0 8.0 40.0 41 31.84847534884491 35.0 30.0 40.0 13.0 40.0 42 33.65957410776314 35.0 31.0 40.0 23.0 40.0 43 34.637558811951536 35.0 33.0 40.0 28.0 40.0 44 35.33181682358635 36.0 34.0 40.0 30.0 40.0 45 35.50906481188078 36.0 35.0 40.0 31.0 40.0 46 35.494359848231106 36.0 35.0 40.0 31.0 40.0 47 35.43822552929816 36.0 35.0 40.0 31.0 40.0 48 35.31846742320294 35.0 35.0 40.0 31.0 40.0 49 35.22459447884576 35.0 35.0 40.0 30.0 40.0 50 35.202300694189894 35.0 34.0 40.0 30.0 40.0 51 35.08247635291009 35.0 34.0 40.0 30.0 40.0 52 34.73080666175422 35.0 34.0 39.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 13.0 15 40.0 16 143.0 17 379.0 18 720.0 19 1291.0 20 2122.0 21 3293.0 22 5106.0 23 7340.0 24 10472.0 25 14416.0 26 19485.0 27 25741.0 28 34815.0 29 47150.0 30 64964.0 31 96495.0 32 142584.0 33 141546.0 34 366509.0 35 297073.0 36 260050.0 37 247359.0 38 537465.0 39 330626.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 0.0 100.0 3 0.0 100.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 99.32933112248315 0.6319438747131377 0.02739728089513841 0.011327721908566844 8 99.46033378016995 0.45792598067588497 0.04926241853260465 0.03247782062157205 9 97.5725933859652 1.2328776402812285 0.6063530079429534 0.5881759658106019 10 56.3303524991363 31.297818228073332 4.487509022662218 7.884320250128142 11 44.08391847351985 16.844774081570137 21.884481322054285 17.18682612285573 12 41.88460927638813 13.090217590108077 23.838268732702645 21.186904400801147 13 30.479738431234704 12.953983858184447 26.049884126060608 30.516393584520234 14 23.25171101287898 15.909503168375108 35.522870331830745 25.315915486915163 15 30.968034749386387 16.474271017816513 31.737416632106452 20.820277600690655 16 39.386526709714516 18.711213842551437 24.926294540339107 16.975964907394932 17 33.1989938273324 21.286031375908003 25.684499235661022 19.83047556109857 18 33.33044808855042 21.661050474974015 25.596022577165872 19.412478859309694 19 29.550338363945784 28.925770680242874 22.99346906026574 18.530421895545608 20 32.64107529811478 26.18581678896341 24.044501011968247 17.12860690095356 21 34.39882914257801 26.057674286974475 23.05138721314708 16.492109357300436 22 25.455611512578287 23.6761054313604 32.63264536553166 18.23563769052965 23 31.190976359307815 20.501144438615412 29.8797831399843 18.428096062092475 24 37.39747659000195 19.191644732534044 24.240760379918996 19.17011829754501 25 30.093880847418973 19.107420673958057 21.60979347417844 29.188905004444532 26 23.31693008951535 20.145958261296297 29.018838641305617 27.518273007882737 27 20.553267012845865 17.787835155679026 28.888137052639664 32.77076077883545 28 20.613970054169844 27.322540510718436 24.52387816037796 27.539611274733762 29 31.16425648370953 25.25476084205994 21.35230419411726 22.228678480113263 30 29.515489624785207 20.262434338728237 28.582627263756784 21.639448772729768 31 33.74648784170393 19.010626983762595 26.694886869552064 20.547998304981412 32 37.913885227973225 18.482250852213497 25.343764371341543 18.260099548471736 33 36.40112629920691 18.040130995130962 27.958736985350736 17.600005720311394 34 26.35181872032118 20.094814161383532 36.460135827288745 17.093231291006543 35 21.88455658930949 29.792811826593272 32.050829482786 16.27180210131123 36 21.385835756311725 38.16049838965708 23.87514968775379 16.57851616627741 37 30.01947916564742 31.85829584396797 21.278843353035793 16.843381637348816 38 28.36288451218163 31.727443720791598 21.364986726619545 18.544685040407227 39 31.61190848404974 27.552519609001664 20.705946640032096 20.129625266916502 40 27.763606626228075 27.726499869411313 18.797996987804446 25.71189651655616 41 20.166092252064015 28.987075859608506 21.785693049595853 29.061138838731626 42 18.532040141532548 26.70493504812212 22.542919270600084 32.220105539745255 43 20.715769016836532 21.365889933682023 24.835973834091398 33.08236721539004 44 23.310118402919166 20.460650655314357 23.9654703940015 32.263760547764974 45 26.867324151229983 24.001448141990174 22.396148122947558 26.735079583832295 46 24.11224154165403 28.569267325957643 21.693904631871618 25.62458650051671 47 21.2847894661971 24.01962518412252 25.91071497118393 28.784870378496446 48 23.57027967054017 21.01356391206075 30.7783988998938 24.637757517505282 49 28.53694003984649 20.679603100709844 26.64743086514441 24.13602599429926 50 23.28979624401343 19.208391696817475 29.215399078277194 28.2864129808919 51 20.38922203012346 20.01954690617711 32.34982865409352 27.241402409605907 52 19.21644529312456 21.311810410816207 31.528775800674243 27.94296849538499 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 1.0 4 2.0 5 23.0 6 44.0 7 109.0 8 174.0 9 684.5 10 1195.0 11 3609.0 12 6023.0 13 7190.0 14 8442.0 15 8527.0 16 9718.0 17 10909.0 18 11920.0 19 12931.0 20 12720.5 21 12510.0 22 12875.5 23 13241.0 24 15089.5 25 16938.0 26 18705.5 27 20473.0 28 23299.5 29 26126.0 30 28232.5 31 30339.0 32 34088.5 33 37838.0 34 39884.0 35 41930.0 36 48404.0 37 54878.0 38 59707.0 39 65725.0 40 66914.0 41 71559.5 42 76205.0 43 82303.0 44 88401.0 45 93628.0 46 98855.0 47 103334.5 48 107814.0 49 121175.0 50 134536.0 51 143607.0 52 152678.0 53 167939.5 54 183201.0 55 212825.0 56 242449.0 57 250070.5 58 257692.0 59 262256.5 60 266821.0 61 277167.0 62 287513.0 63 216253.5 64 110325.0 65 75656.0 66 59939.5 67 44223.0 68 34498.5 69 24774.0 70 21644.5 71 18515.0 72 14763.5 73 11012.0 74 7970.0 75 4928.0 76 3498.0 77 2068.0 78 1283.0 79 498.0 80 425.0 81 352.0 82 200.5 83 49.0 84 36.0 85 23.0 86 23.5 87 24.0 88 18.5 89 11.0 90 9.0 91 9.5 92 10.0 93 5.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2657198.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.17634727461908 #Duplication Level Percentage of deduplicated Percentage of total 1 69.608274311239 5.691414239556363 2 10.503428478310958 1.7175935762558845 3 4.349528692840759 1.0668977122075811 4 2.2034212024590127 0.7206374777425458 5 1.2975192034043874 0.5304483801260692 6 0.7799830150497276 0.3826447199610607 7 0.5376968645133199 0.3077477404914295 8 0.39514624404841414 0.25846823324809737 9 0.29246077177454627 0.21521347508086236 >10 4.502805393914953 9.893397137553423 >50 2.7289117485573877 16.104161870215798 >100 2.5824038021741753 38.96009097227114 >500 0.1497279012482533 8.157171416287692 >1k 0.06386243816681772 9.02417885580888 >5k 0.002683295721294862 1.4925042283452459 >10k+ 0.00214663657703589 5.477429964847917 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TCAAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 56220 2.115762543852585 No Hit TCAAAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 41142 1.5483227068513525 No Hit TCAAAGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 17276 0.6501585504730923 No Hit TCAAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 10192 0.3835619325319378 No Hit TCAAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 9866 0.3712933699332906 No Hit TCAAAGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCT 7621 0.28680587596407947 No Hit TCAAAGGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTC 5738 0.21594175518723108 No Hit TCAAAGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCT 5508 0.20728602083849226 No Hit TCAAAGGGGGGAGCTGAAGAGATGGCTGAGCGGTTAAGAGCACTGACTGCTC 5281 0.19874318737256313 No Hit TCAAAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGCT 4601 0.1731523206023789 No Hit TCAAAGGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 4429 0.16667933665462642 No Hit TCAAAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 4054 0.15256672630342188 No Hit TCAAAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 4038 0.15196458826177048 No Hit TCAAAGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 3800 0.143007784892206 No Hit TCAAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGCTC 3727 0.1402605300771715 No Hit TCAAAGGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTC 3631 0.13664770182726316 No Hit TCAAAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTT 3619 0.1361960982960246 No Hit TCAAAGGGGGGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACCCGACTGC 3333 0.12543288080150594 No Hit TCAAAGGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTT 3047 0.11466966330698727 No Hit TCAAAGGGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 2955 0.11120736956749178 No Hit TCAAAGGGGGCTCTTTCCAGCCAGCGCCGAGCGATGGGCATCTCTCGGGACA 2949 0.1109815678018725 No Hit TCAAAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGTACCCGACTGCT 2694 0.1013849927630534 No Hit TCAAAGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCTT 2659 0.100067815796941 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.007827794541468118 0.0 0.0 0.0 0.0 6 0.007827794541468118 0.0 0.0 0.0 0.0 7 0.007940695424277755 0.0 0.0 0.0 0.0 8 0.008241764445103451 0.0 0.0 0.0 0.0 9 0.009220238762786966 0.0 0.0 0.0 0.0 10 0.01738673595268399 0.0 0.0 0.0 0.0 11 0.023370482741594718 0.0 0.0 0.0 0.0 12 0.029580031296124715 0.0 0.0 0.0 0.0 13 0.035902480733464345 0.0 0.0 0.0 0.0 14 0.04952585392582713 0.0 0.0 0.0 0.0 15 0.05863319180580446 0.0 0.0 0.0 0.0 16 0.07188022872213512 0.0 0.0 0.0 0.0 17 0.08094993297450924 0.0 0.0 0.0 0.0 18 0.08949276644043838 0.0 0.0 0.0 0.0 19 0.10541179091659711 0.0 0.0 0.0 0.0 20 0.1147072969345905 0.0 0.0 0.0 0.0 21 0.12607265247076055 0.0 0.0 0.0 0.0 22 0.1346154859366897 0.0 0.0 0.0 0.0 23 0.1412013707672518 0.0 0.0 0.0 0.0 24 0.15023344139202272 0.0 0.0 0.0 0.0 25 0.15580321827729812 0.0 0.0 0.0 0.0 26 0.16058268898290606 0.0 0.0 0.0 0.0 27 0.16777071185511958 0.0 0.0 0.0 0.0 28 0.1746952993341106 0.0 0.0 0.0 0.0 29 0.18007690808136992 0.0 0.0 0.0 0.0 30 0.18444240888334254 0.0 0.0 0.0 0.0 31 0.1886950088025055 0.0 0.0 0.0 0.0 32 0.19456585470860657 0.0 0.0 0.0 0.0 33 0.1993453254142145 0.0 0.0 0.0 0.0 34 0.20536670583072847 0.0 0.0 0.0 0.0 35 0.21695786313251778 0.0 0.0 0.0 0.0 36 0.23295215486388293 0.0 0.0 0.0 0.0 37 0.24168315646782815 0.0 0.0 0.0 0.0 38 0.24905934747805772 0.0 0.0 0.0 0.0 39 0.25474202524614276 0.0 0.0 0.0 0.0 40 0.26159134546992735 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTCG 20 6.312956E-4 46.000004 15 GCGATAA 20 6.312956E-4 46.000004 15 TCGAATA 20 6.312956E-4 46.000004 44 GTACGGA 20 6.312956E-4 46.000004 19 GTCGCTA 30 1.8623323E-6 46.0 33 CGACGTC 25 3.4183755E-5 46.0 20 CACGTTC 25 3.4183755E-5 46.0 25 ATCGACG 55 1.8189894E-12 46.0 15 CGAAACG 35 1.020253E-7 45.999996 44 CGATAGC 215 0.0 44.930233 33 AGGGGAT 29320 0.0 44.38404 5 CAAAGGG 273500 0.0 44.164207 2 AAGGGGA 85440 0.0 44.158707 4 TCAAAGG 275110 0.0 44.128967 1 AAAGGGG 267180 0.0 44.059658 3 ATCGTAC 115 0.0 44.0 37 GCGATAG 230 0.0 44.0 32 AAGGGGG 150935 0.0 43.761486 4 AGGGGAG 29325 0.0 43.70196 5 AGGGGGA 22815 0.0 43.257942 5 >>END_MODULE