##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527171_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1026448 Sequences flagged as poor quality 0 Sequence length 50 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.2273617367855 33.0 31.0 34.0 31.0 34.0 2 32.88387721540692 34.0 31.0 34.0 31.0 34.0 3 32.58187068414571 34.0 31.0 34.0 31.0 34.0 4 36.190249286861096 37.0 37.0 37.0 35.0 37.0 5 36.22250615715555 37.0 37.0 37.0 35.0 37.0 6 36.37094718875189 37.0 37.0 37.0 35.0 37.0 7 36.47844995557495 37.0 37.0 37.0 35.0 37.0 8 36.62951946908173 37.0 37.0 37.0 35.0 37.0 9 38.69782102941406 39.0 39.0 39.0 39.0 39.0 10 38.14056045703241 39.0 39.0 39.0 37.0 39.0 11 37.802384533848766 39.0 38.0 39.0 35.0 39.0 12 37.42294300344489 39.0 37.0 39.0 35.0 39.0 13 37.2961026764142 39.0 37.0 39.0 35.0 39.0 14 38.17164727292566 40.0 38.0 40.0 35.0 40.0 15 38.10454109706483 40.0 38.0 40.0 34.0 40.0 16 37.98452527551323 40.0 38.0 40.0 34.0 40.0 17 38.040086784717786 40.0 38.0 40.0 34.0 40.0 18 38.02314096768662 40.0 38.0 40.0 34.0 40.0 19 37.965883318005396 40.0 38.0 40.0 34.0 40.0 20 37.71467721696569 40.0 38.0 40.0 33.0 40.0 21 37.80326134397456 40.0 38.0 40.0 33.0 40.0 22 37.63874351160507 40.0 37.0 40.0 33.0 40.0 23 37.63665670350568 40.0 37.0 40.0 33.0 40.0 24 37.6107362477203 40.0 37.0 40.0 33.0 40.0 25 37.54128119495581 40.0 37.0 40.0 33.0 40.0 26 37.36044008074447 39.0 36.0 40.0 33.0 40.0 27 37.183860263744485 39.0 36.0 40.0 33.0 40.0 28 36.94639280314249 39.0 35.0 40.0 32.0 40.0 29 37.250302012376665 39.0 36.0 40.0 33.0 40.0 30 37.2348993811669 39.0 35.0 40.0 33.0 40.0 31 37.161618513553535 39.0 35.0 40.0 33.0 40.0 32 36.37460738391034 39.0 35.0 40.0 31.0 40.0 33 36.53878131186382 39.0 35.0 40.0 31.0 40.0 34 36.52317896279207 39.0 35.0 40.0 31.0 40.0 35 36.466060628497495 39.0 35.0 40.0 31.0 40.0 36 36.219290212460834 38.0 35.0 40.0 31.0 40.0 37 36.14119565725687 38.0 35.0 40.0 31.0 40.0 38 35.91046891805527 38.0 35.0 40.0 30.0 40.0 39 35.86609453182236 37.0 35.0 40.0 31.0 40.0 40 35.755808379966645 37.0 35.0 40.0 30.0 40.0 41 35.58246009539694 37.0 35.0 40.0 30.0 40.0 42 35.421020840802456 37.0 35.0 40.0 30.0 40.0 43 35.21116023412779 36.0 34.0 40.0 29.0 40.0 44 35.03034347575328 36.0 34.0 40.0 29.0 40.0 45 34.911593183483234 35.0 34.0 40.0 29.0 40.0 46 34.59816766168379 35.0 34.0 39.0 28.0 40.0 47 34.51348631396817 35.0 34.0 39.0 28.0 40.0 48 34.37320059077518 35.0 34.0 39.0 28.0 40.0 49 34.09836348261188 35.0 34.0 39.0 27.0 40.0 50 33.66931593222453 35.0 33.0 38.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 1.0 12 1.0 13 1.0 14 5.0 15 9.0 16 33.0 17 92.0 18 151.0 19 299.0 20 598.0 21 914.0 22 1421.0 23 2189.0 24 3264.0 25 4624.0 26 6087.0 27 8155.0 28 10670.0 29 13878.0 30 17424.0 31 22089.0 32 28209.0 33 38399.0 34 63662.0 35 90507.0 36 140985.0 37 195393.0 38 275326.0 39 102059.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 100.0 0.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 0.0 100.0 7 99.1686865774009 0.4069373217152744 0.11028322915530062 0.314092871728524 8 99.12114398391346 0.5872679375867068 0.13356740916247095 0.15802066933736536 9 95.81196514582327 2.2686000654684895 0.8453423846117876 1.074092404096457 10 49.52837357567066 36.01205321652923 5.721380917494115 8.738192290305987 11 30.73131809891977 23.252127725905257 26.424426761024428 19.592127414150546 12 28.205910089941234 15.921507957539008 28.008238118248563 27.864343834271192 13 22.72535968699827 18.191764219911775 32.56755334902498 26.515322744064967 14 24.069022493102427 19.128587127647968 31.054861035337396 25.747529343912213 15 24.3081968107493 21.547706264710925 28.318531479431986 25.82556544510779 16 28.260662011129646 21.533872149392856 25.92220940563964 24.283256433837856 17 28.090755693420416 21.00759122722242 24.876077502221253 26.02557557713591 18 25.904478356429163 22.168390410425076 24.513565226879493 27.413566006266272 19 26.953240690224934 20.043879475628575 25.930977506897573 27.07190232724892 20 27.90428740666843 20.413893348713234 25.827319065359376 25.85450017925896 21 27.423698034386547 20.244084454351317 26.890889747946318 25.441327763315826 22 28.460672143157762 20.533821489252258 25.19445700123143 25.811049366358553 23 26.28891088491575 21.698127912958086 25.51322619363085 26.499735008495318 24 27.047449067074027 23.27667840942746 24.337618661637023 25.33825386186149 25 26.109457079170106 24.699741243589543 23.393099309463313 25.79770236777703 26 26.91407650460618 23.52822549218275 23.502310881798202 26.05538712141287 27 27.021047339952926 20.45588281140399 24.995615949371036 27.527453899272054 28 25.9972253830686 21.923857808676132 24.87753885243091 27.201377955824356 29 28.12115177778124 21.130636914875375 24.753324084610227 25.994887222733155 30 26.84890028525556 21.791946596417937 23.165128676757128 28.194024441569372 31 27.82206210153851 21.596028244976853 23.899603292129754 26.682306361354886 32 27.726879491216312 22.521160351035803 24.895269901641388 24.856690256106496 33 27.800531541782924 22.014558945022056 25.042963696163856 25.141945817031157 34 27.65449394416473 22.97992689352018 25.583955543778153 23.781623618536933 35 26.63106168066965 24.236493227128893 25.757271678643246 23.375173413558212 36 28.616744345548923 23.721708259941078 24.247794335416895 23.413753059093107 37 26.974868673327823 25.17847957227254 23.112325222514926 24.73432653188471 38 26.64304475238882 24.546007201533833 24.103120664661045 24.7078273814163 39 27.269574298941592 23.317985908687046 23.230986859538916 26.18145293283245 40 26.632912724268547 25.752595357972346 23.569630414789643 24.044861502969464 41 26.281409287172853 24.256659860022133 23.40703084812869 26.05490000467632 42 26.77203326422771 23.223874955185263 23.66140320795598 26.34268857263105 43 25.49549514442037 22.912022820444875 26.15290789207052 25.439574143064235 44 24.90092045578539 22.76530325939551 26.6315487974062 25.702227487412905 45 25.563983757579535 22.291728368119962 25.741099402989725 26.403188471310774 46 26.745631537106608 23.395632316493383 25.01714650912662 24.841589637273394 47 25.575382289214843 23.236539990335604 26.102442598163766 25.085635122285787 48 26.44936713793587 23.324708119651458 25.260120337318597 24.965804405094072 49 25.31798980562094 23.82380792792231 26.658242794569233 24.19995947188752 50 24.6993515502003 24.08753292909139 25.021238289713654 26.191877230994653 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 1.5 10 3.0 11 19.0 12 35.0 13 313.5 14 592.0 15 1555.0 16 2518.0 17 3603.0 18 4688.0 19 4337.0 20 3986.0 21 3930.0 22 3874.0 23 3821.5 24 3769.0 25 4325.0 26 4881.0 27 5276.0 28 5671.0 29 5874.0 30 6077.0 31 7422.0 32 8767.0 33 11362.0 34 13957.0 35 12425.0 36 10893.0 37 12547.5 38 14202.0 39 16647.0 40 19092.0 41 22240.5 42 25389.0 43 30622.0 44 35855.0 45 36694.0 46 37533.0 47 35972.5 48 34412.0 49 39480.0 50 44548.0 51 45787.0 52 47026.0 53 48885.0 54 50744.0 55 56480.0 56 62216.0 57 67043.0 58 71870.0 59 74430.5 60 76991.0 61 82775.5 62 88560.0 63 88164.5 64 87769.0 65 78870.0 66 69971.0 67 65300.0 68 60629.0 69 50321.0 70 40013.0 71 34772.0 72 29531.0 73 25758.5 74 21986.0 75 19235.0 76 16484.0 77 14855.5 78 13227.0 79 9332.5 80 5438.0 81 3774.0 82 2110.0 83 1526.0 84 942.0 85 534.5 86 127.0 87 95.5 88 64.0 89 34.5 90 5.0 91 3.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1026448.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.875904723296319 #Duplication Level Percentage of deduplicated Percentage of total 1 68.78281615765319 6.792925389729895 2 11.958505107709332 2.362021141535795 3 4.69987587835933 1.3924657915798602 4 2.250918258575862 0.8891941704649313 5 1.2883610521981943 0.6361865500357582 6 0.7746150814630837 0.4590014845054698 7 0.5077476605444462 0.3510127263309487 8 0.3258380643361639 0.25743565428858006 9 0.27286439123124306 0.24253044571620075 >10 3.5632291381788 9.663214482288168 >50 2.7626270232610177 19.80398789675123 >100 2.693661298005949 47.48977108418867 >500 0.09995032645662147 6.629955196050368 >1k 0.01899056202675808 3.030297986534113 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AACGCCGGGAAGATAGTAATAGAAAAGGGGGCTGCAAAAAGATCAACAGA 3060 0.29811544276962887 No Hit AACGCCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 2984 0.2907112683740433 No Hit AACGCCGGGATGTTACTTTATGCTGCTGGCTCTTGTACCTTGGGAGATTG 2736 0.2665502782410799 No Hit AACGCCGGGACCTTTGTATTATTGTGATAGCTTGTTGCTTATTATTTTAT 2178 0.21218805044191227 No Hit AACGCCGGAGATGAATTTCTCATGTGGTCCATATCTCAACATTTGCTTTT 1744 0.16990631770922637 No Hit AACGCCGGGCTCGGGATATTTTTCAATGTCCATTCTGCTGTGTTAATTGA 1651 0.16084594640936511 No Hit AACGCCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 1643 0.16006655963088243 No Hit AACGCCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 1589 0.15480569887612428 No Hit AACGCCGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCTAGGCTCACA 1407 0.1370746496656431 No Hit AACGCCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 1357 0.13220348230012627 No Hit AACGCCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 1290 0.12567611803033374 No Hit AACGCCGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTT 1275 0.12421476782067868 No Hit AACGCCGGGATCACCTTTGGAAAATGTTTATTCCAAACTAGCTTTAATGG 1258 0.12255857091640297 No Hit AACGCCGGGACCAGACAATTGAAGAGAACATTAAGATCTTTGAGGAAGAC 1153 0.11232911944881767 No Hit AACGCCGGGATCGGCATTGGCATTGCACTCTCAGGCCTGCCCTTCTACTT 1150 0.11203684940688666 No Hit AACGCCGGGAACATGAACTGTGTTAGTGAGCACACTGCTTCAAATAAGGT 1105 0.10765279877792153 No Hit AACGCCGGGGTTCAGTTACAGTGTACTCATATGTATAAAATAAATAAATC 1047 0.10200224463392203 No Hit AACGCCGGGGCTATTTGTAGTTACTTTTGCTTTCTTGAGAGACTGCAGAT 1038 0.101125434508129 No Hit AACGCCGGGGCTTGACTCCCTGACCTTGGACTGGTCCTCGTCCGTGGTCG 1034 0.10073574111888765 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 2.922700419310087E-4 0.0 0.0 0.0 0.0 8 2.922700419310087E-4 0.0 0.0 0.0 0.0 9 3.896933892413449E-4 0.0 0.0 0.0 0.0 10 0.003409817155861768 0.0 0.0 0.0 0.0 11 0.005553130796689165 0.0 0.0 0.0 0.0 12 0.008962947952550933 0.0 0.0 0.0 0.0 13 0.013736691970757407 0.0 0.0 0.0 0.0 14 0.023868720091032376 0.0 0.0 0.0 0.0 15 0.030493507708135238 0.0 0.0 0.0 0.0 16 0.04111265256496189 0.0 0.0 0.0 0.0 17 0.04871167365516811 0.0 0.0 0.0 0.0 18 0.05387511106261594 0.0 0.0 0.0 0.0 19 0.06410456253020123 0.0 0.0 0.0 0.0 20 0.06819634311723535 0.0 0.0 0.0 0.0 21 0.07462628403971755 0.0 0.0 0.0 0.0 22 0.08232272847723411 0.0 0.0 0.0 0.0 23 0.08875266939971631 0.0 0.0 0.0 0.0 24 0.0976181940049569 0.0 0.0 0.0 0.0 25 0.10395071158012875 0.0 0.0 0.0 0.0 26 0.11174457936495566 0.0 0.0 0.0 0.0 27 0.11934360045516187 0.0 0.0 0.0 0.0 28 0.1333725624678503 0.0 0.0 0.0 0.0 29 0.14019219677957384 0.0 0.0 0.0 0.0 30 0.14730410113322837 0.0 0.0 0.0 0.0 31 0.15431858213957259 0.0 0.0 0.0 0.0 32 0.16182017988246847 0.0 0.0 0.0 0.0 33 0.16766558072108864 0.0 0.0 0.0 0.0 34 0.17701822206288093 0.0 0.0 0.0 0.0 35 0.19854878181846522 0.0 0.0 0.0 0.0 36 0.20731688307639548 0.0 0.0 0.0 0.0 37 0.21520817420853272 0.0 0.0 0.0 0.0 38 0.22173553847832525 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGCGCT 65 0.0 44.000004 29 CTATGCG 40 8.310963E-9 44.0 10 TCGTTAT 25 4.442506E-5 44.0 27 TACCCGA 30 2.5274512E-6 44.0 29 ACACGAT 50 2.7284841E-11 44.0 36 GGTAATC 45 4.802132E-10 44.0 9 GTATTCG 45 4.802132E-10 44.0 27 TTAATCG 20 7.8560883E-4 44.0 22 ATAGGTA 30 2.5274512E-6 44.0 34 CGAGTAC 25 4.442506E-5 44.0 42 TAGGTCG 75 0.0 44.0 19 GACGTAT 20 7.8560883E-4 44.0 25 CTATAAC 20 7.8560883E-4 44.0 33 CGCATAC 20 7.8560883E-4 44.0 17 TCTTATC 20 7.8560883E-4 44.0 13 TAGCGAA 25 4.442506E-5 44.0 41 ATTCGTT 25 4.442506E-5 44.0 33 TATATCG 20 7.8560883E-4 44.0 33 CGATTTC 30 2.5274512E-6 44.0 28 ATTCGAA 30 2.5274512E-6 44.0 10 >>END_MODULE