##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527170_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1099686 Sequences flagged as poor quality 0 Sequence length 52 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.12512844575633 33.0 31.0 34.0 31.0 34.0 2 32.79677562504206 34.0 31.0 34.0 31.0 34.0 3 32.470850770128926 34.0 31.0 34.0 31.0 34.0 4 36.07041919238765 37.0 35.0 37.0 35.0 37.0 5 36.21579341739369 37.0 37.0 37.0 35.0 37.0 6 36.37655385264521 37.0 37.0 37.0 35.0 37.0 7 36.469694076309054 37.0 37.0 37.0 35.0 37.0 8 36.58223438326941 37.0 37.0 37.0 35.0 37.0 9 38.65328466489525 39.0 39.0 39.0 38.0 39.0 10 38.03527461475367 39.0 38.0 39.0 37.0 39.0 11 37.73338843997286 39.0 38.0 39.0 35.0 39.0 12 37.3958620915425 39.0 37.0 39.0 35.0 39.0 13 37.319072898991166 39.0 37.0 39.0 35.0 39.0 14 38.216740051250994 40.0 38.0 40.0 35.0 40.0 15 38.06823766056856 40.0 38.0 40.0 34.0 40.0 16 32.96430890272314 40.0 35.0 40.0 3.0 40.0 17 34.47945686314093 40.0 35.0 40.0 16.0 40.0 18 36.53515548983983 40.0 35.0 40.0 30.0 40.0 19 37.51505975342052 40.0 37.0 40.0 33.0 40.0 20 37.82369421816773 40.0 37.0 40.0 33.0 40.0 21 37.98785198683988 40.0 38.0 40.0 34.0 40.0 22 38.02824533548667 40.0 38.0 40.0 34.0 40.0 23 37.95558550349827 40.0 38.0 40.0 34.0 40.0 24 37.86732576389988 40.0 37.0 40.0 34.0 40.0 25 37.78028819135644 40.0 37.0 40.0 33.0 40.0 26 37.63796756528682 40.0 37.0 40.0 33.0 40.0 27 37.4613426014335 40.0 36.0 40.0 33.0 40.0 28 37.28164948903596 39.0 36.0 40.0 33.0 40.0 29 37.09811255212852 39.0 35.0 40.0 33.0 40.0 30 36.987694669205574 39.0 35.0 40.0 32.0 40.0 31 36.90294320378726 39.0 35.0 40.0 32.0 40.0 32 36.76340428085835 39.0 35.0 40.0 32.0 40.0 33 36.39958860983953 38.0 35.0 40.0 31.0 40.0 34 36.3204978512048 38.0 35.0 40.0 31.0 40.0 35 36.15071393106759 38.0 35.0 40.0 31.0 40.0 36 36.04006598247136 38.0 35.0 40.0 31.0 40.0 37 35.685644811337056 37.0 35.0 40.0 30.0 40.0 38 35.654765996839096 37.0 34.0 40.0 30.0 40.0 39 35.28155764463674 37.0 34.0 40.0 29.0 40.0 40 35.23624652855452 36.0 34.0 40.0 29.0 40.0 41 35.13794846892659 36.0 34.0 40.0 29.0 40.0 42 35.025265393939726 36.0 34.0 39.0 29.0 40.0 43 34.80896910572655 35.0 34.0 39.0 29.0 40.0 44 35.021523416684396 36.0 34.0 39.0 29.0 40.0 45 35.076661883483105 35.0 34.0 39.0 30.0 40.0 46 34.995873367488535 35.0 34.0 39.0 30.0 40.0 47 34.67967947214023 35.0 34.0 39.0 29.0 40.0 48 34.61313775023052 35.0 34.0 39.0 29.0 40.0 49 34.54441085909978 35.0 34.0 39.0 29.0 40.0 50 34.019620146114434 35.0 34.0 38.0 27.0 40.0 51 34.039678599163764 35.0 34.0 37.0 27.0 40.0 52 33.709855358711486 35.0 33.0 37.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 3.0 14 2.0 15 12.0 16 28.0 17 56.0 18 139.0 19 299.0 20 605.0 21 960.0 22 1629.0 23 2414.0 24 3474.0 25 4859.0 26 6991.0 27 9088.0 28 11971.0 29 15426.0 30 20646.0 31 26470.0 32 35433.0 33 51610.0 34 80396.0 35 119605.0 36 176447.0 37 219996.0 38 232464.0 39 78663.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 100.0 0.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 0.0 100.0 7 99.2020449473759 0.39493091664347824 0.09129878892702098 0.3117253470536135 8 99.17021768031965 0.5525213560961947 0.13021898978435661 0.14704197379979378 9 95.76015335286618 2.280741957249615 0.8175060881015127 1.1415986017826907 10 49.743926902770426 35.81240463186764 5.671709924469349 8.771958540892582 11 30.75532470177851 23.344300100210425 26.31987676482196 19.58049843318911 12 28.282982596850374 15.945733600318638 27.937156606522223 27.834127196308767 13 23.025299949258244 18.028691826575947 32.45344580180161 26.492562422364202 14 24.16053309762969 19.0608046296852 30.96765804056794 25.811004232117167 15 24.233463006712824 21.62708263995359 28.216418141178483 25.923036212155104 16 27.04662967428884 28.951809880274915 22.817604297954144 21.1839561474821 17 28.122664105935698 20.84204036424943 24.854549389553018 26.180746140261856 18 25.961956413012445 21.950811413439837 24.578015906358726 27.509216267188997 19 26.981792984542864 19.9306893058564 25.867202092233597 27.22031561736714 20 27.808574447615047 20.441198669438368 25.794726858394124 25.955500024552464 21 27.60360684777291 20.141749553963585 26.707714747664333 25.546928850599173 22 28.203960039502185 20.56905334795569 25.192464030641474 26.034522581900653 23 26.414085475308408 21.740387710673776 25.35996639040599 26.48556042361183 24 27.076820110467896 23.07413207042738 24.314577070181855 25.53447074892287 25 26.216392679364837 24.564193778951445 23.273461697248123 25.945951844435594 26 26.947237666024666 23.31338218364151 23.53353593662191 26.205844213711917 27 27.10228192411288 20.432832644955017 24.84754739080065 27.617338040131457 28 26.068714160223916 21.912527757923623 24.795805348072086 27.22295273378037 29 28.33845297657695 21.027456928614168 24.59911283766457 26.03497725714431 30 26.86521425206832 21.604257942721834 23.129056839861562 28.40147096534829 31 28.038912926053438 21.558972288453248 23.755508390576946 26.64660639491637 32 27.66526081081327 22.12431548642067 25.0536971462763 25.15672655648976 33 28.20077731279656 21.837688212817113 24.888650032827552 25.072884441558774 34 27.84904054430083 22.790323783334514 25.63504491282057 23.725590759544087 35 26.82056514314086 24.117338949481944 25.711885028999188 23.35021087837801 36 28.704375612674895 23.576548214672187 24.147711255758463 23.571364916894456 37 27.22849977175303 25.244297008418766 22.94973292376187 24.57747029606633 38 26.668612676709536 24.575378789945493 24.008762501295823 24.747246032049148 39 27.68181098968251 23.29064842145849 23.029301091402456 25.99823949745655 40 26.527845221272255 25.693970824398964 23.59609925014959 24.182084704179193 41 26.340519020884145 24.126159649208955 23.41713907424483 26.116182255662068 42 26.72917541916511 23.15597361428626 23.61646870106558 26.498382265483055 43 25.48081907017094 22.722031561736713 26.269044072580716 25.528105295511626 44 25.00713840132547 22.643009004388524 26.578496043416028 25.771356550869978 45 25.552657758669294 22.269175019050895 25.640955690988154 26.53721153129166 46 26.62141738641758 23.207442851868624 25.192645900738935 24.978493860974858 47 25.82200737301375 23.25409253186819 26.05098182572116 24.8729182693969 48 26.493108032656593 23.28164585163401 25.118533836022284 25.10671227968711 49 25.50137039118439 23.481612023795883 26.79883166649389 24.218185918525833 50 24.674952668307135 24.167353226284593 24.912202210449163 26.245491894959105 51 25.127081730603102 23.85853780079041 25.07015639009681 25.94422407850968 52 25.633408081943394 23.883544939191733 25.271122847794736 25.21192413107014 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 25.0 12 50.0 13 301.5 14 1542.5 15 2532.0 16 3726.5 17 4921.0 18 4574.5 19 4228.0 20 4178.0 21 4128.0 22 3971.5 23 3815.0 24 4095.5 25 4376.0 26 4705.0 27 5034.0 28 5292.0 29 5550.0 30 6838.5 31 8127.0 32 8940.5 33 9754.0 34 12217.5 35 14681.0 36 13082.0 37 11483.0 38 13270.0 39 19394.5 40 23732.0 41 25513.5 42 27295.0 43 30422.0 44 33549.0 45 35627.0 46 37705.0 47 40463.0 48 43221.0 49 42623.0 50 42025.0 51 45772.5 52 49520.0 53 50827.5 54 52135.0 55 58371.0 56 64607.0 57 68281.5 58 71956.0 59 76664.5 60 81373.0 61 88617.0 62 95861.0 63 90729.5 64 82473.5 65 79349.0 66 70792.5 67 62236.0 68 55199.0 69 48162.0 70 41775.5 71 35389.0 72 29027.0 73 22665.0 74 21437.5 75 20210.0 76 18704.0 77 17198.0 78 11713.5 79 6229.0 80 4960.0 81 3691.0 82 2387.5 83 1084.0 84 759.0 85 434.0 86 273.5 87 113.0 88 79.5 89 26.5 90 7.0 91 5.5 92 4.0 93 2.5 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1099686.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.990974924428041 #Duplication Level Percentage of deduplicated Percentage of total 1 70.63562046723067 8.469899537939792 2 10.119510413794314 2.4268559123859212 3 4.108771847744698 1.4780454058950765 4 2.242431400676489 1.0755575478104733 5 1.3642410281535176 0.8179289979732379 6 0.9492363546139018 0.6829361595318469 7 0.6275791957129477 0.5267700479220672 8 0.5102774289788294 0.4894979084309405 9 0.3961717285085699 0.42754367360822176 >10 4.734447366917852 13.886268774406735 >50 2.2566557580691873 19.700966954238318 >100 1.9722296168166997 41.76214467958943 >500 0.06876236381928272 5.573245616805556 >1k 0.014065028963035102 2.682338783462383 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AACGCCGGGAAGATAGTAATAGAAAAGGGGGCTGCAAAAAGATCAACAGACT 2913 0.26489379695658577 No Hit AACGCCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 2783 0.25307224062141376 No Hit AACGCCGGGATGTTACTTTATGCTGCTGGCTCTTGTACCTTGGGAGATTGTA 2586 0.23515803602119154 No Hit AACGCCGGGACCTTTGTATTATTGTGATAGCTTGTTGCTTATTATTTTATAC 1957 0.17795989036870524 No Hit AACGCCGGGCTCGGGATATTTTTCAATGTCCATTCTGCTGTGTTAATTGAGG 1834 0.16677487937465785 No Hit AACGCCGGAGATGAATTTCTCATGTGGTCCATATCTCAACATTTGCTTTTTA 1719 0.15631734877046718 No Hit AACGCCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 1607 0.14613262331247281 No Hit AACGCCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 1572 0.1429498966068496 No Hit AACGCCGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCTAGGCTCACAAC 1421 0.12921870424830362 No Hit AACGCCGGGATCGGCATTGGCATTGCACTCTCAGGCCTGCCCTTCTACTTCT 1285 0.11685153762073901 No Hit AACGCCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 1254 0.11403255111004415 No Hit AACGCCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 1240 0.11275946042779485 No Hit AACGCCGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 1206 0.10966766877090368 No Hit AACGCCGGGACCAGACAATTGAAGAGAACATTAAGATCTTTGAGGAAGACGC 1202 0.10930392857597532 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 5.456102923925557E-4 0.0 0.0 0.0 0.0 8 0.0010002855360530189 0.0 0.0 0.0 0.0 9 0.0012730906822492967 0.0 0.0 0.0 0.0 10 0.0037283369980157972 0.0 0.0 0.0 0.0 11 0.006547323508710668 0.0 0.0 0.0 0.0 12 0.008093219337156243 0.0 0.0 0.0 0.0 13 0.012276231578832503 0.0 0.0 0.0 0.0 14 0.023461242572879897 0.0 0.0 0.0 0.0 15 0.031736332007500326 0.0 0.0 0.0 0.0 16 0.041284512124370044 0.0 0.0 0.0 0.0 17 0.048104640779276994 0.0 0.0 0.0 0.0 18 0.05201484787475698 0.0 0.0 0.0 0.0 19 0.062017703235287165 0.0 0.0 0.0 0.0 20 0.06601884537949924 0.0 0.0 0.0 0.0 21 0.07229336374201363 0.0 0.0 0.0 0.0 22 0.07820414190959965 0.0 0.0 0.0 0.0 23 0.08484240046704242 0.0 0.0 0.0 0.0 24 0.09420871048644795 0.0 0.0 0.0 0.0 25 0.10021042370276606 0.0 0.0 0.0 0.0 26 0.10775803274752975 0.0 0.0 0.0 0.0 27 0.11339600576891949 0.0 0.0 0.0 0.0 28 0.1269453280300013 0.0 0.0 0.0 0.0 29 0.13240143095392684 0.0 0.0 0.0 0.0 30 0.14085839048601145 0.0 0.0 0.0 0.0 31 0.1467691686535975 0.0 0.0 0.0 0.0 32 0.15313462206484396 0.0 0.0 0.0 0.0 33 0.15950007547609044 0.0 0.0 0.0 0.0 34 0.1673204896670504 0.0 0.0 0.0 0.0 35 0.18950864155768102 0.0 0.0 0.0 0.0 36 0.19760186089483725 0.0 0.0 0.0 0.0 37 0.20396731430608372 0.0 0.0 0.0 0.0 38 0.21269707898436463 0.0 0.0 0.0 0.0 39 0.2216087137601097 0.0 0.0 0.0 0.0 40 0.22970193309726594 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTCGAT 35 1.0195072E-7 46.000004 26 CGATTGG 35 1.0195072E-7 46.000004 23 ATCGTAA 105 0.0 46.000004 43 CACTAGA 35 1.0195072E-7 46.000004 28 TACGAAA 35 1.0195072E-7 46.000004 20 TCGTAAT 105 0.0 46.000004 44 AACGTCT 30 1.86133E-6 46.0 13 AACGTAC 20 6.311335E-4 46.0 44 GATACGA 55 1.8189894E-12 46.0 9 CCGATTA 25 3.417058E-5 46.0 12 TAGACTA 20 6.311335E-4 46.0 13 ACGCAAT 30 1.86133E-6 46.0 41 ATTCGTT 20 6.311335E-4 46.0 33 GTCTATA 20 6.311335E-4 46.0 25 CACGATA 25 3.417058E-5 46.0 37 CGCGATT 20 6.311335E-4 46.0 17 TAACGGC 20 6.311335E-4 46.0 29 CGCGAAA 25 3.417058E-5 46.0 17 ATCGTAC 25 3.417058E-5 46.0 32 AAACGCG 30 1.86133E-6 46.0 22 >>END_MODULE