##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527169_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1069200 Sequences flagged as poor quality 0 Sequence length 52 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.07593621399177 33.0 31.0 34.0 31.0 34.0 2 32.769946689113354 34.0 31.0 34.0 31.0 34.0 3 32.43863355780022 34.0 31.0 34.0 31.0 34.0 4 36.07180041152263 37.0 35.0 37.0 35.0 37.0 5 36.229956041900486 37.0 37.0 37.0 35.0 37.0 6 36.38197250280584 37.0 37.0 37.0 35.0 37.0 7 36.47028245417134 37.0 37.0 37.0 35.0 37.0 8 36.60473344556678 37.0 37.0 37.0 35.0 37.0 9 38.593728020950245 39.0 39.0 39.0 38.0 39.0 10 38.03416573138795 39.0 38.0 39.0 37.0 39.0 11 37.66702861952862 39.0 38.0 39.0 35.0 39.0 12 37.35622427983539 39.0 37.0 39.0 35.0 39.0 13 37.228458660680886 39.0 37.0 39.0 34.0 39.0 14 38.14250374111485 40.0 38.0 40.0 34.0 40.0 15 38.182332585110366 40.0 38.0 40.0 34.0 40.0 16 38.248612981668536 40.0 38.0 40.0 35.0 40.0 17 38.21150673400673 40.0 38.0 40.0 35.0 40.0 18 38.20890198279087 40.0 38.0 40.0 34.0 40.0 19 38.13416760194538 40.0 38.0 40.0 34.0 40.0 20 38.08288533482978 40.0 38.0 40.0 34.0 40.0 21 33.66182285821175 40.0 34.0 40.0 10.0 40.0 22 34.320430228208004 39.0 34.0 40.0 15.0 40.0 23 36.37329218106996 39.0 34.0 40.0 30.0 40.0 24 37.16202207257763 39.0 36.0 40.0 32.0 40.0 25 37.46828563411897 39.0 37.0 40.0 33.0 40.0 26 37.511208380097266 40.0 37.0 40.0 33.0 40.0 27 37.41572951739619 40.0 36.0 40.0 33.0 40.0 28 37.256730265619154 39.0 36.0 40.0 33.0 40.0 29 37.24375140291807 39.0 35.0 40.0 33.0 40.0 30 37.05391507669285 39.0 35.0 40.0 33.0 40.0 31 36.86652731013842 39.0 35.0 40.0 32.0 40.0 32 36.753555929667044 39.0 35.0 40.0 32.0 40.0 33 36.40757669285447 38.0 35.0 40.0 31.0 40.0 34 36.3216835016835 38.0 35.0 40.0 31.0 40.0 35 36.154588477366254 38.0 35.0 40.0 31.0 40.0 36 35.97536756453423 38.0 35.0 40.0 31.0 40.0 37 35.83246539468762 37.0 35.0 40.0 30.0 40.0 38 35.73771043771044 37.0 35.0 40.0 30.0 40.0 39 35.58521137298915 37.0 34.0 40.0 30.0 40.0 40 30.758178077066965 35.0 30.0 39.0 8.0 40.0 41 31.504740927796483 35.0 30.0 39.0 12.0 40.0 42 33.22057706696596 35.0 30.0 39.0 23.0 40.0 43 33.995381593714924 35.0 32.0 39.0 26.0 40.0 44 34.69854283576506 35.0 33.0 39.0 28.0 40.0 45 34.94766647961092 35.0 34.0 39.0 30.0 40.0 46 34.95858305274972 35.0 34.0 39.0 30.0 40.0 47 34.88953984287318 35.0 34.0 39.0 30.0 40.0 48 34.736743359521135 35.0 34.0 39.0 29.0 40.0 49 34.61217171717172 35.0 34.0 39.0 29.0 40.0 50 34.45087448559671 35.0 34.0 38.0 29.0 40.0 51 34.240038346427234 35.0 34.0 38.0 29.0 40.0 52 33.851286943509166 35.0 33.0 37.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 1.0 15 7.0 16 25.0 17 65.0 18 150.0 19 302.0 20 635.0 21 1028.0 22 1642.0 23 2509.0 24 3580.0 25 5318.0 26 7144.0 27 9602.0 28 12570.0 29 16812.0 30 21951.0 31 29630.0 32 41354.0 33 56729.0 34 90894.0 35 123840.0 36 161729.0 37 174035.0 38 226739.0 39 80908.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 100.0 0.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 0.0 100.0 7 99.22465394687617 0.3889824167601945 0.09436962214739993 0.29199401421623644 8 99.19500561167229 0.5524691358024691 0.11307519640852974 0.1394500561167228 9 95.72961092405536 2.283576505798728 0.8636363636363636 1.1231762065095399 10 49.77169846614291 35.78208005985784 5.70894126449682 8.737280209502432 11 30.949869060980173 23.33539094650206 26.226524504302283 19.488215488215488 12 28.3228582117471 15.955013093901982 27.84175084175084 27.880377852600073 13 23.05396558174336 18.059670781893004 32.39450056116723 26.49186307519641 14 24.160306771417883 19.039001122334458 31.00645342312009 25.794238683127574 15 24.206041900486344 21.555929667040775 28.25729517396184 25.980733258511034 16 28.202300785634122 21.275626636737748 25.93677515899738 24.585297418630752 17 28.16965955854845 20.92199775533109 24.745043022820802 26.16329966329966 18 25.93593340815563 22.019453797231574 24.586606808829032 27.458005985783764 19 26.976243920688365 20.011316872427983 25.838570894126452 27.1738683127572 20 27.708005985783764 20.44481855592967 25.823045267489714 26.024130190796857 21 32.44145155256266 19.486438458660682 25.17732884399551 22.894781144781145 22 28.374392068836514 20.52702955480733 25.147586980920316 25.950991395435842 23 26.403759820426487 21.759072203516645 25.31537598204265 26.521791994014215 24 27.19799850355406 23.065843621399175 24.228020950243174 25.508136924803594 25 26.264683875794987 24.596427235316124 23.258230452674898 25.880658436213995 26 26.988402543958102 23.39188178077067 23.366629255518145 26.253086419753085 27 27.098110736999626 20.412083800972688 24.838664421997755 27.65114104002993 28 26.083333333333332 21.939955106621774 24.744294799850355 27.23241676019454 29 28.25542461653573 21.108305274971944 24.634867190422746 26.001402918069584 30 26.84717545828657 21.620463898241677 23.091657313879534 28.44070332959222 31 28.07846988402544 21.614945753834643 23.706790123456788 26.599794238683128 32 27.722876917321358 22.20164609053498 24.88627010849233 25.189206883651327 33 28.18331462775907 21.828282828282827 24.939768050879163 25.048634493078936 34 27.8426861204639 22.828376356154134 25.528526000748226 23.800411522633745 35 26.8410961466517 24.12037037037037 25.697904975682757 23.340628507295175 36 28.727366255144034 23.57865693976805 24.151234567901234 23.54274223718668 37 27.151515151515156 25.113636363636367 23.014216236438457 24.720632248410027 38 26.59988776655443 24.52600074822297 24.042368125701458 24.831743359521138 39 27.48971193415638 23.25710811821923 23.062850729517397 26.190329218106996 40 27.151234567901234 29.759259259259256 21.590347923681257 21.49915824915825 41 26.421530115974562 24.152731013842125 23.35578002244669 26.069958847736626 42 26.742330714552935 23.24055368499813 23.543677515899738 26.473438084549194 43 25.490927796483355 22.719042274597832 26.26094276094276 25.529087167976055 44 24.96081182192293 22.63711185933408 26.62878787878788 25.773288439955106 45 25.684811073699965 22.211279461279464 25.55780022446689 26.546109240553683 46 26.6805087916199 23.315001870557424 25.118312757201643 24.886176580621026 47 25.578750467639356 23.240460157126826 26.113355780022445 25.067433595211376 48 26.423868312757204 23.30677141788253 25.14964459408904 25.11971567527123 49 25.47465394687617 23.53329592218481 26.806864945753833 24.185185185185183 50 24.585671530115974 24.15628507295174 25.05564908342686 26.202394313505422 51 25.19519266741489 23.816217732884397 25.113449307893752 25.875140291806957 52 25.776842499064724 23.92433595211373 25.188271604938272 25.110549943883274 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 1.5 10 3.0 11 30.0 12 57.0 13 305.5 14 1476.5 15 2399.0 16 3466.0 17 4533.0 18 4276.5 19 4020.0 20 4040.5 21 4061.0 22 3988.5 23 3916.0 24 4050.5 25 4185.0 26 4580.5 27 4976.0 28 5198.0 29 5420.0 30 6603.0 31 7786.0 32 8378.5 33 8971.0 34 11630.0 35 14289.0 36 12971.5 37 11654.0 38 13031.0 39 18244.0 40 22080.0 41 23922.0 42 25764.0 43 29049.0 44 32334.0 45 33951.0 46 35568.0 47 38670.0 48 41772.0 49 41434.5 50 41097.0 51 44786.5 52 48476.0 53 49618.0 54 50760.0 55 57005.5 56 63251.0 57 66303.0 58 69355.0 59 73951.0 60 78547.0 61 85812.5 62 93078.0 63 88187.0 64 80864.5 65 78433.0 66 69974.0 67 61515.0 68 54359.5 69 47204.0 70 41224.0 71 35244.0 72 28742.0 73 22240.0 74 20722.5 75 19205.0 76 18052.5 77 16900.0 78 11637.5 79 6375.0 80 5062.5 81 3750.0 82 2449.0 83 1148.0 84 795.0 85 442.0 86 260.0 87 78.0 88 64.0 89 26.5 90 3.0 91 2.0 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1069200.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.257175729909399 #Duplication Level Percentage of deduplicated Percentage of total 1 66.42062819866723 8.141293119220396 2 11.021334760275888 2.701808738697208 3 5.489590295456445 2.0186061880984467 4 3.155960764921196 1.5473266276935354 5 1.961719881306022 1.202257265901246 6 1.3400468435085564 0.9855113788316865 7 0.9379724621974662 0.8047825309279101 8 0.684839700301047 0.6715360442726735 9 0.48527806853165517 0.5353324707477163 >10 4.282842177614079 12.798697170215261 >50 2.2475732479237256 19.980974744516082 >100 1.8908029205721968 40.54677664026804 >500 0.0694385200885526 5.6473288946540645 >1k 0.011972158635957344 2.4177681859557314 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AACGCCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 2974 0.2781518892630004 No Hit AACGCCGGGAAGATAGTAATAGAAAAGGGGGCTGCAAAAAGATCAACAGACT 2866 0.2680508791619903 No Hit AACGCCGGGATGTTACTTTATGCTGCTGGCTCTTGTACCTTGGGAGATTGTA 2539 0.237467265245043 No Hit AACGCCGGGACCTTTGTATTATTGTGATAGCTTGTTGCTTATTATTTTATAC 1874 0.17527123082678636 No Hit AACGCCGGAGATGAATTTCTCATGTGGTCCATATCTCAACATTTGCTTTTTA 1641 0.15347923681257014 No Hit AACGCCGGGCTCGGGATATTTTTCAATGTCCATTCTGCTGTGTTAATTGAGG 1604 0.15001870557426114 No Hit AACGCCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 1519 0.14206883651328098 No Hit AACGCCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 1462 0.13673774784885895 No Hit AACGCCGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCTAGGCTCACAAC 1390 0.13000374111485224 No Hit AACGCCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 1232 0.11522633744855967 No Hit AACGCCGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 1212 0.11335578002244669 No Hit AACGCCGGGATCGGCATTGGCATTGCACTCTCAGGCCTGCCCTTCTACTTCT 1161 0.10858585858585859 No Hit AACGCCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 1145 0.10708941264496821 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 5.611672278338945E-4 0.0 0.0 0.0 0.0 8 9.352787130564908E-4 0.0 0.0 0.0 0.0 9 9.352787130564908E-4 0.0 0.0 0.0 0.0 10 0.0032734754956977178 0.0 0.0 0.0 0.0 11 0.0051440329218107 0.0 0.0 0.0 0.0 12 0.008511036288814066 0.0 0.0 0.0 0.0 13 0.013374485596707819 0.0 0.0 0.0 0.0 14 0.023381967826412272 0.0 0.0 0.0 0.0 15 0.03170594837261504 0.0 0.0 0.0 0.0 16 0.0402169846614291 0.0 0.0 0.0 0.0 17 0.04835390946502058 0.0 0.0 0.0 0.0 18 0.05396558174335952 0.0 0.0 0.0 0.0 19 0.06219603441825664 0.0 0.0 0.0 0.0 20 0.06640478862701085 0.0 0.0 0.0 0.0 21 0.07248410026187804 0.0 0.0 0.0 0.0 22 0.07865693976805088 0.0 0.0 0.0 0.0 23 0.08473625140291807 0.0 0.0 0.0 0.0 24 0.09549195660306771 0.0 0.0 0.0 0.0 25 0.10447063224841002 0.0 0.0 0.0 0.0 26 0.11064347175458286 0.0 0.0 0.0 0.0 27 0.11765806210250655 0.0 0.0 0.0 0.0 28 0.13112607557052003 0.0 0.0 0.0 0.0 29 0.1358959970071081 0.0 0.0 0.0 0.0 30 0.14524878413767303 0.0 0.0 0.0 0.0 31 0.15057987280209503 0.0 0.0 0.0 0.0 32 0.15684624017957352 0.0 0.0 0.0 0.0 33 0.16180321735877293 0.0 0.0 0.0 0.0 34 0.16909839132061355 0.0 0.0 0.0 0.0 35 0.18855218855218855 0.0 0.0 0.0 0.0 36 0.195099139543584 0.0 0.0 0.0 0.0 37 0.20117845117845118 0.0 0.0 0.0 0.0 38 0.20997007108118218 0.0 0.0 0.0 0.0 39 0.21782641227085672 0.0 0.0 0.0 0.0 40 0.2277403666292555 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTAT 20 6.3112547E-4 46.000004 29 GATACGG 20 6.3112547E-4 46.000004 42 TTAGACC 20 6.3112547E-4 46.000004 46 CATTACG 20 6.3112547E-4 46.000004 18 CCGTAAA 40 5.6115823E-9 46.000004 29 CTTATCG 20 6.3112547E-4 46.000004 23 TACGATT 20 6.3112547E-4 46.000004 12 CGTAAAT 20 6.3112547E-4 46.000004 20 ATACGAT 20 6.3112547E-4 46.000004 10 TATACGC 20 6.3112547E-4 46.000004 21 CGGAATT 25 3.416994E-5 46.0 6 GTCGACG 25 3.416994E-5 46.0 15 GATCACG 25 3.416994E-5 46.0 9 AATGCGA 25 3.416994E-5 46.0 15 CGTAAGT 25 3.416994E-5 46.0 25 ATACGCA 25 3.416994E-5 46.0 22 TTCGATA 30 1.8612809E-6 46.0 27 TACACTA 25 3.416994E-5 46.0 44 TACGTAC 25 3.416994E-5 46.0 37 GATACGA 35 1.019489E-7 45.999996 9 >>END_MODULE