##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527168_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1764400 Sequences flagged as poor quality 0 Sequence length 50 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.383093402856495 33.0 31.0 34.0 31.0 34.0 2 32.99204715484017 34.0 31.0 34.0 31.0 34.0 3 33.24633699841306 34.0 34.0 34.0 31.0 34.0 4 36.62740308320109 37.0 37.0 37.0 35.0 37.0 5 36.292141237814555 37.0 37.0 37.0 35.0 37.0 6 36.22983280435275 37.0 37.0 37.0 35.0 37.0 7 36.6000957832691 37.0 37.0 37.0 35.0 37.0 8 36.66602017683065 37.0 37.0 37.0 35.0 37.0 9 38.650846180004535 39.0 39.0 39.0 39.0 39.0 10 38.144609498979825 39.0 39.0 39.0 37.0 39.0 11 36.97663738381319 39.0 35.0 39.0 34.0 39.0 12 36.70570618907277 39.0 35.0 39.0 33.0 39.0 13 36.673796758104736 39.0 35.0 39.0 33.0 39.0 14 37.48198367717071 40.0 35.0 40.0 33.0 40.0 15 37.546670822942644 40.0 35.0 40.0 33.0 40.0 16 37.4666096123328 40.0 35.0 40.0 33.0 40.0 17 37.49948877805486 40.0 35.0 40.0 33.0 40.0 18 37.493653366583544 40.0 35.0 40.0 33.0 40.0 19 37.433256064384494 40.0 35.0 40.0 33.0 40.0 20 37.14639084107912 40.0 35.0 40.0 33.0 40.0 21 37.282536272953976 40.0 35.0 40.0 33.0 40.0 22 37.11193210156427 40.0 35.0 40.0 33.0 40.0 23 37.12121571072319 39.0 35.0 40.0 33.0 40.0 24 37.144532985717525 39.0 35.0 40.0 33.0 40.0 25 37.08629789163455 39.0 35.0 40.0 33.0 40.0 26 36.93523520743596 39.0 35.0 40.0 33.0 40.0 27 36.766042280661985 39.0 35.0 40.0 32.0 40.0 28 36.54789390160961 38.0 35.0 40.0 32.0 40.0 29 36.71811947404217 39.0 35.0 40.0 32.0 40.0 30 36.736613579687145 39.0 35.0 40.0 32.0 40.0 31 36.66852527771481 39.0 35.0 40.0 32.0 40.0 32 35.95475572432555 38.0 35.0 40.0 31.0 40.0 33 36.05364769893448 38.0 35.0 40.0 31.0 40.0 34 36.02591872591249 38.0 35.0 40.0 31.0 40.0 35 35.96130412604852 37.0 35.0 40.0 31.0 40.0 36 35.744079007027885 37.0 35.0 40.0 31.0 40.0 37 35.62518306506461 37.0 35.0 40.0 30.0 40.0 38 35.388472001813646 36.0 35.0 40.0 30.0 40.0 39 35.319853207889366 36.0 35.0 40.0 30.0 40.0 40 35.14830197234187 35.0 34.0 40.0 30.0 40.0 41 34.96997959646339 35.0 34.0 40.0 29.0 40.0 42 34.85089435502154 35.0 34.0 39.0 29.0 40.0 43 34.74688789390161 35.0 34.0 39.0 29.0 40.0 44 34.61262072092496 35.0 34.0 39.0 29.0 40.0 45 34.49627012015416 35.0 34.0 39.0 28.0 40.0 46 34.22669972795285 35.0 34.0 39.0 27.0 40.0 47 34.13627522103831 35.0 34.0 38.0 27.0 40.0 48 34.00719054636137 35.0 34.0 38.0 27.0 40.0 49 33.70091305826343 35.0 33.0 37.0 26.0 40.0 50 33.351267853094534 35.0 33.0 37.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 6.0 14 11.0 15 31.0 16 92.0 17 240.0 18 456.0 19 841.0 20 1411.0 21 2206.0 22 3398.0 23 4915.0 24 6921.0 25 9362.0 26 12072.0 27 15477.0 28 20108.0 29 26447.0 30 33641.0 31 42149.0 32 54970.0 33 84158.0 34 180985.0 35 189424.0 36 202650.0 37 303583.0 38 395979.0 39 172866.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 100.0 0.0 0.0 0.0 7 99.56126728632964 0.33790523690773067 0.06733167082294264 0.03349580593969621 8 99.12644525051009 0.6624348220358196 0.1260485150759465 0.08507141237814556 9 94.05837678530945 2.802822489231467 1.6754704148719113 1.4633303105871684 10 54.91980276581274 29.788483337111764 6.137270460213103 9.154443436862389 11 34.76133529811834 22.472851961006572 21.032759011562003 21.73305372931308 12 28.23345046474722 16.76059850374065 28.606665155293587 26.399285876218542 13 24.206585808206757 17.644921786442982 30.22897302199048 27.91951938335978 14 24.23367717070959 17.886987077760143 31.797834958059397 26.08150079347087 15 25.541373838131943 18.888120607571977 27.53791657220585 28.03258898209023 16 30.088415325323055 19.526467921106324 24.500226705962366 25.88489004760825 17 29.938902743142144 19.90251643618227 23.200011335298118 26.958569485377463 18 29.884493312174108 19.667649059170255 22.664248469734755 27.78360915892088 19 28.643051462253453 19.864259805032873 22.618567218317843 28.874121514395828 20 28.970358195420538 21.52165041940603 23.84487644525051 25.66311493992292 21 30.21066651552936 19.058603491271818 25.05832010881886 25.67240988437996 22 31.022160507821354 18.650929494445702 24.74937655860349 25.577533439129454 23 29.680854681478124 20.397925640444345 23.418159147585584 26.50306053049195 24 29.727386080253908 20.783552482430288 22.224155520290186 27.264905917025615 25 28.91215143958286 20.743425527091365 22.082747676263885 28.26167535706189 26 28.48945817274994 20.74268873271367 21.698197687599183 29.0696554069372 27 29.445930627975514 18.83660167762412 22.91645885286783 28.801008841532532 28 30.033892541373834 20.06795511221945 21.72766946270687 28.170482883699844 29 28.97942643391521 19.855701654953524 22.996429381092724 28.16844253003854 30 28.65977102697801 20.51167535706189 23.48101337565178 27.34754024030832 31 30.690206302425754 20.917195647245524 21.329403763318975 27.06319428700975 32 32.465824076173206 20.1564271140331 21.658977556109726 25.71877125368397 33 31.809793697574246 20.84912718204489 22.217921106325097 25.123158014055768 34 29.123101337565178 22.087791883926545 24.32889367490365 24.460213103604627 35 29.835638177284064 23.313420992972116 23.781398775787803 23.06954205395602 36 30.783099070505553 21.862559510315123 22.15790070278848 25.19644071639084 37 31.17479029698481 22.39118113806393 21.1687259124915 25.26530265245976 38 30.99393561550669 22.482486964407165 21.89543187485831 24.628145545227838 39 31.585751530265245 20.25833144411698 22.434822035819543 25.72109498979823 40 28.60751530265246 22.120664248469733 22.41334164588529 26.85847880299252 41 28.387270460213106 21.833654500113354 22.416685558830196 27.362389480843348 42 26.638347313534343 20.519780095216504 24.718147812287462 28.123724778961684 43 27.893788256631147 19.531115393334844 25.334561323962816 27.240535026071182 44 26.304466107458623 20.561153933348447 25.446950804806168 27.687429154386763 45 27.54959192926774 19.206245749263207 24.2254024030832 29.018759918385857 46 28.908524144184994 20.608705508954888 23.234810700521425 27.2479596463387 47 27.50640444343686 20.199331217411018 24.977556109725686 27.316708229426435 48 28.964747222851962 20.582804352754476 24.668669236000905 25.783779188392653 49 27.673940149625935 21.58524144184992 24.107345273180687 26.63347313534346 50 25.667365676717296 22.134776694627067 24.205282248923147 27.992575379732486 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 1.0 4 2.0 5 21.5 6 41.0 7 455.5 8 870.0 9 2120.5 10 3371.0 11 2610.5 12 1850.0 13 1878.5 14 1907.0 15 2061.0 16 2215.0 17 2628.0 18 3041.0 19 3409.0 20 3777.0 21 3900.5 22 4024.0 23 4617.5 24 5211.0 25 5948.0 26 6685.0 27 7793.0 28 8901.0 29 10874.0 30 12847.0 31 15811.5 32 18776.0 33 19981.0 34 21186.0 35 22022.0 36 22858.0 37 24385.5 38 25913.0 39 28644.0 40 31375.0 41 33754.5 42 36134.0 43 42252.5 44 48371.0 45 48983.5 46 49596.0 47 55466.0 48 61336.0 49 70981.0 50 80626.0 51 89900.5 52 99175.0 53 106629.5 54 114084.0 55 144250.0 56 174416.0 57 177121.0 58 179826.0 59 175268.5 60 170711.0 61 162488.5 62 154266.0 63 142730.5 64 131195.0 65 110637.5 66 90080.0 67 77584.0 68 65088.0 69 58717.5 70 52347.0 71 42551.5 72 32756.0 73 33011.0 74 33266.0 75 21868.5 76 10471.0 77 7085.5 78 3700.0 79 2433.0 80 1166.0 81 904.0 82 642.0 83 427.0 84 212.0 85 138.5 86 65.0 87 42.5 88 20.0 89 10.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1764400.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.912408872189748 #Duplication Level Percentage of deduplicated Percentage of total 1 68.25178330849019 5.4003601579286995 2 10.64402174494544 1.6843970418097383 3 4.697756337387881 1.1151170677000046 4 2.472397251175072 0.7825047178310075 5 1.5004143862845023 0.5935946050999316 6 0.8651950706248513 0.41074662917921456 7 0.615120169680757 0.34069576016314196 8 0.41288776004357985 0.26135494206298987 9 0.2928534728278547 0.2085458774989227 >10 3.808290420376631 8.063549087404434 >50 3.0013214712846326 17.435209003085685 >100 3.224855841042673 45.83562157721895 >500 0.14529734034272673 7.8550117888517175 >1k 0.06482496722983193 8.72214415289116 >5k 0.0029804582634405485 1.291147591274394 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAAACGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 6156 0.34890047608252095 No Hit AAAACGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 5458 0.3093402856495126 No Hit AAAACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 5196 0.29449104511448654 No Hit AAAACGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 5090 0.28848333711176605 No Hit AAAACGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGA 4755 0.2694967127635457 No Hit AAAACGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 4420 0.25051008841532535 No Hit AAAACGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCT 4188 0.23736114259805033 No Hit AAAACGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTT 4169 0.236284289276808 No Hit AAAACGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 3814 0.2161641351167536 No Hit AAAACGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 3807 0.21576739968261166 No Hit AAAACGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 3201 0.1814214463840399 No Hit AAAACGGGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAA 3074 0.17422353207889368 No Hit AAAACGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 2969 0.1682725005667649 No Hit AAAACGGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 2932 0.1661754704148719 No Hit AAAACGGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 2825 0.16011108592155973 No Hit AAAACGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCC 2723 0.15433008388120606 No Hit AAAACGGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGT 2575 0.1459419632736341 No Hit AAAACGGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCAT 2203 0.12485830877352075 No Hit AAAACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2167 0.12281795511221946 No Hit AAAACGGGCCTGGTGGTGGATTATACAAGAGACTAGAATTGCACCTGGGT 2157 0.12225119020630243 No Hit AAAACGGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTC 2125 0.12043754250736795 No Hit AAAACGGGGGCTGCATCCACACTGACTGAGAGGCCTTGCTATAACCGGAG 2096 0.11879392428020857 No Hit AAAACGGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATC 2063 0.11692360009068238 No Hit AAAACGGGGGAGGAAGACGCAGTGGAATTCATCAGTGTGCCTGTACCAGA 2056 0.11652686465654047 No Hit AAAACGGGGCTTTCGCCGCCGGACGCCGCCGAGGTCGCACGCGTGAGGTC 1956 0.1108592155973702 No Hit AAAACGGGGGACTGTCGAGTCGCGTCCACCCGCGAGCACAGCTTCTTTGC 1928 0.10927227386080254 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 5.667649059170256E-4 0.0 0.0 0.0 0.0 8 9.06823849467241E-4 0.0 0.0 0.0 0.0 9 0.002720471548401723 0.0 0.0 0.0 0.0 10 0.011335298118340512 0.0 0.0 0.0 0.0 11 0.019780095216504194 0.0 0.0 0.0 0.0 12 0.026921333031058717 0.0 0.0 0.0 0.0 13 0.03428927680798005 0.0 0.0 0.0 0.0 14 0.046361369304012696 0.0 0.0 0.0 0.0 15 0.054749489911584674 0.0 0.0 0.0 0.0 16 0.06687825889820902 0.0 0.0 0.0 0.0 17 0.0753797324869644 0.0 0.0 0.0 0.0 18 0.08240761732033552 0.0 0.0 0.0 0.0 19 0.09130582634323282 0.0 0.0 0.0 0.0 20 0.09629335751530266 0.0 0.0 0.0 0.0 21 0.10150759464973928 0.0 0.0 0.0 0.0 22 0.10734527318068465 0.0 0.0 0.0 0.0 23 0.1148832464293811 0.0 0.0 0.0 0.0 24 0.12310133756517797 0.0 0.0 0.0 0.0 25 0.13075266379505782 0.0 0.0 0.0 0.0 26 0.1372137837225119 0.0 0.0 0.0 0.0 27 0.1462253457265926 0.0 0.0 0.0 0.0 28 0.15563364316481523 0.0 0.0 0.0 0.0 29 0.16266152799818634 0.0 0.0 0.0 0.0 30 0.1701995012468828 0.0 0.0 0.0 0.0 31 0.17807753343912944 0.0 0.0 0.0 0.0 32 0.18419859442303332 0.0 0.0 0.0 0.0 33 0.1902629789163455 0.0 0.0 0.0 0.0 34 0.19649739288143278 0.0 0.0 0.0 0.0 35 0.21191339832237588 0.0 0.0 0.0 0.0 36 0.22483563817728405 0.0 0.0 0.0 0.0 37 0.23118340512355476 0.0 0.0 0.0 0.0 38 0.23832464293810926 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATACTT 95 0.0 44.000004 37 CAAACCG 40 8.3164196E-9 44.0 21 ACACGAT 25 4.4438122E-5 44.0 10 CGTATAA 25 4.4438122E-5 44.0 42 CCGATTT 25 4.4438122E-5 44.0 43 TTTACGA 20 7.85763E-4 44.0 43 ACGCATG 20 7.85763E-4 44.0 20 CACGATT 25 4.4438122E-5 44.0 22 TAACGTA 20 7.85763E-4 44.0 34 CGATTCA 35 1.4466787E-7 44.0 36 TCGATTG 30 2.5284899E-6 44.0 28 CGACAGT 20 7.85763E-4 44.0 22 ATGTACG 25 4.4438122E-5 44.0 42 CCGTACT 20 7.85763E-4 44.0 43 CTACGTA 20 7.85763E-4 44.0 11 CGTAGAT 25 4.4438122E-5 44.0 31 TACGAAT 25 4.4438122E-5 44.0 16 CGAATGT 45 4.802132E-10 44.0 24 CGTACTC 25 4.4438122E-5 44.0 15 CATACCG 20 7.85763E-4 44.0 17 >>END_MODULE