##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527167_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1883064 Sequences flagged as poor quality 0 Sequence length 52 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.32977636447832 33.0 31.0 34.0 31.0 34.0 2 32.93855068123017 34.0 31.0 34.0 31.0 34.0 3 33.20185984119499 34.0 34.0 34.0 31.0 34.0 4 36.561442415127686 37.0 37.0 37.0 35.0 37.0 5 36.35279151425549 37.0 37.0 37.0 35.0 37.0 6 36.25503806562071 37.0 37.0 37.0 35.0 37.0 7 36.59294054795801 37.0 37.0 37.0 35.0 37.0 8 36.61887009682093 37.0 37.0 37.0 35.0 37.0 9 38.601534520334944 39.0 39.0 39.0 38.0 39.0 10 38.01514181143073 39.0 38.0 39.0 37.0 39.0 11 36.870190816669 39.0 35.0 39.0 34.0 39.0 12 36.630817646134176 39.0 35.0 39.0 33.0 39.0 13 36.6421704201238 39.0 35.0 39.0 33.0 39.0 14 37.45311046252278 40.0 35.0 40.0 33.0 40.0 15 37.418327258128244 40.0 35.0 40.0 33.0 40.0 16 32.43352376764677 39.0 33.0 40.0 3.0 40.0 17 33.92237279242766 39.0 33.0 40.0 16.0 40.0 18 35.971853319908405 39.0 34.0 40.0 30.0 40.0 19 36.91098921757306 39.0 35.0 40.0 32.0 40.0 20 37.17043233793434 39.0 35.0 40.0 33.0 40.0 21 37.3615240905248 40.0 35.0 40.0 33.0 40.0 22 37.400133505818175 40.0 35.0 40.0 33.0 40.0 23 37.322020388048415 40.0 35.0 40.0 33.0 40.0 24 37.28444386383044 40.0 35.0 40.0 33.0 40.0 25 37.21342662809124 39.0 35.0 40.0 33.0 40.0 26 37.097896831971724 39.0 35.0 40.0 33.0 40.0 27 36.9320384224859 39.0 35.0 40.0 33.0 40.0 28 36.78307269428973 39.0 35.0 40.0 32.0 40.0 29 36.54046118453754 38.0 35.0 40.0 32.0 40.0 30 36.46804781993602 38.0 35.0 40.0 32.0 40.0 31 36.37677264288415 38.0 35.0 40.0 31.0 40.0 32 36.306649694327966 38.0 35.0 40.0 31.0 40.0 33 35.86731359104098 38.0 35.0 40.0 31.0 40.0 34 35.78464991099612 37.0 35.0 40.0 30.0 40.0 35 35.63321586520692 37.0 34.0 40.0 30.0 40.0 36 35.54631228678367 37.0 34.0 40.0 30.0 40.0 37 35.17387353802101 36.0 34.0 40.0 29.0 40.0 38 35.12631169200834 36.0 34.0 40.0 29.0 40.0 39 34.742809060127534 35.0 34.0 39.0 28.0 40.0 40 34.62689159794888 35.0 33.0 39.0 28.0 40.0 41 34.53037708755517 35.0 33.0 39.0 28.0 40.0 42 34.45950535935051 35.0 33.0 39.0 28.0 40.0 43 34.36055333222875 35.0 33.0 39.0 28.0 40.0 44 34.634165381527126 35.0 34.0 39.0 29.0 40.0 45 34.71569898845711 35.0 34.0 39.0 30.0 40.0 46 34.6617183483939 35.0 34.0 39.0 30.0 40.0 47 34.36922218257053 35.0 34.0 38.0 29.0 40.0 48 34.317847401893935 35.0 34.0 38.0 29.0 40.0 49 34.22376403563554 35.0 34.0 37.0 29.0 40.0 50 33.746524281702584 35.0 33.0 37.0 27.0 40.0 51 33.852103805287555 35.0 33.0 37.0 27.0 40.0 52 33.52540752730656 35.0 33.0 36.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 3.0 13 0.0 14 6.0 15 27.0 16 100.0 17 204.0 18 420.0 19 843.0 20 1432.0 21 2364.0 22 3792.0 23 5304.0 24 7523.0 25 10388.0 26 13598.0 27 17927.0 28 23027.0 29 29634.0 30 38396.0 31 51548.0 32 75403.0 33 122254.0 34 199231.0 35 221762.0 36 260152.0 37 338983.0 38 327597.0 39 131145.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 100.0 0.0 0.0 0.0 7 99.60872280496042 0.3197979463257754 0.04811307528581078 0.023366173427987576 8 99.11691795924091 0.6635462204152381 0.13212508974734793 0.08741073059651716 9 94.0991915303994 2.7898148974224988 1.6808775485060519 1.4301160236720578 10 55.28919888012304 29.425818771958895 6.119122876333465 9.165859471584609 11 34.82637871044213 22.44650208383783 20.89605026701164 21.831068938708402 12 28.242322087831322 16.723382742169147 28.61182625763118 26.422468912368352 13 24.409366861668005 17.442954673871945 30.144912759205212 28.002765705254838 14 24.301776254020044 17.871458431577473 31.725421971850132 26.10134334255235 15 25.649579621298052 18.959525539227556 27.494232803558454 27.89666203591593 16 28.488516587858935 27.479522735286743 21.721566553234517 22.310394123619805 17 29.990961539278537 19.878718938920823 23.091461575389896 27.038857946410744 18 29.983739267491703 19.602254623316043 22.653239613735913 27.76076649545634 19 28.87246530123246 19.69205507619497 22.499288393809238 28.936191228763334 20 28.79408241036948 21.442659410407718 23.900993274790448 25.86226490443235 21 30.38282288865381 18.93886771771963 24.921564004197414 25.756745389429142 22 30.94833739055072 18.652313463589127 24.7116932828624 25.687655862997754 23 29.720763606547628 20.295061665455876 23.38651261985785 26.597662108138653 24 29.899727253030168 20.671203952706865 22.137218915554648 27.29184987870832 25 29.105914615753896 20.60068059290603 22.01767969649465 28.275725094845424 26 28.506147427809147 20.634986383893484 21.691084317898916 29.167781870398457 27 29.568671059507274 18.56219438107255 22.88281226766589 28.98632229175429 28 30.026860478454264 19.993638028234834 21.64201535370014 28.337486139610764 29 29.136609270847934 19.864911654622468 22.841974569106522 28.156504505423076 30 28.899867450070737 20.34349337037934 23.41487065760909 27.341768521940836 31 30.810848701902856 20.776935887468508 21.338679938653176 27.07353547197546 32 32.61917810547066 19.7309278919888 21.684552410326997 25.96534159221354 33 32.067470887872105 20.703491755989177 22.192607367566904 25.03642998857182 34 29.142344604325714 21.972434287947728 24.295828500783827 24.589392606942727 35 29.948052748074417 23.215567819256275 23.767009512156783 23.069369920512525 36 30.834214875330844 21.725655633584413 22.21767289906238 25.222456592022365 37 31.36138761083001 22.390476372550268 21.059347956309505 25.18878806031022 38 30.970110415790437 22.392600570134633 21.915187163049158 24.722101851025773 39 31.832481530102 20.44311823708594 22.20981336800024 25.514586864811818 40 28.7045474821886 22.022777770697118 22.41825025596581 26.85442449114847 41 28.346460874404695 21.8668085630653 22.34236329726446 27.444367265265544 42 26.706049289880745 20.530157233105196 24.608138650624724 28.15565482638933 43 27.93192371581635 19.519517127405123 25.274605642718463 27.27395351406006 44 26.270482575207215 20.491443732130186 25.46764209819741 27.77043159446519 45 27.672028141369598 19.14687976616833 24.18887515241118 28.992216940050895 46 28.656381301963187 20.57577437622938 23.258742135158446 27.50910218664899 47 27.666876962227523 20.25502054099064 24.964579005280754 27.113523491501084 48 29.00798910711479 20.677895175097607 24.547174179953522 25.766941537834082 49 27.715096247392545 21.483178479329435 24.13327428064049 26.66845099263753 50 25.678150078807732 22.30147249376548 24.062644710960434 27.957732716466353 51 26.018871371339475 22.280761567317946 23.929988571816995 27.770378489525584 52 27.605965596495924 21.463848281311734 23.90556029959683 27.024625822595517 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.5 4 1.0 5 27.0 6 53.0 7 448.0 8 843.0 9 2061.0 10 3279.0 11 2562.0 12 1845.0 13 1846.5 14 2018.5 15 2189.0 16 2672.5 17 3156.0 18 3320.5 19 3485.0 20 3634.5 21 3784.0 22 4131.0 23 4478.0 24 5361.0 25 6244.0 26 7057.5 27 7871.0 28 9565.5 29 11260.0 30 12660.5 31 14061.0 32 17259.5 33 20458.0 34 21726.5 35 22995.0 36 23802.5 37 24610.0 38 25204.5 39 29203.5 40 32608.0 41 35314.5 42 38021.0 43 43323.0 44 48625.0 45 51972.5 46 55320.0 47 58248.0 48 61176.0 49 71485.5 50 81795.0 51 92680.0 52 103565.0 53 111821.0 54 120077.0 55 144375.0 56 168673.0 57 186923.5 58 205174.0 59 186813.5 60 168453.0 61 163095.5 62 157738.0 63 148646.5 64 125170.5 65 110786.0 66 91150.0 67 71514.0 68 64615.0 69 57716.0 70 50772.5 71 43829.0 72 40650.5 73 37472.0 74 26302.5 75 15133.0 76 9735.5 77 4338.0 78 3370.5 79 2403.0 80 1553.0 81 703.0 82 398.0 83 93.0 84 55.0 85 17.0 86 13.0 87 9.0 88 6.0 89 3.0 90 3.0 91 4.5 92 6.0 93 3.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1883064.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.356192347797531 #Duplication Level Percentage of deduplicated Percentage of total 1 72.00406172083623 6.7368385128282915 2 9.905451229806424 1.85354613995593 3 3.9774645336266725 1.1164176969946185 4 2.0719054320532715 0.7754058299494783 5 1.2279678659742277 0.5744551775484666 6 0.7785548087776699 0.4370585126535963 7 0.4793933160161631 0.3139707252426996 8 0.3602788980423144 0.26966709351491425 9 0.258223818182936 0.21743925405320222 >10 3.4320465486540677 8.699643877186451 >50 2.676089613839892 18.318836582797136 >100 2.6584966214917847 44.004042013077374 >500 0.11402865410810352 7.232735255824648 >1k 0.05473375397188968 8.789213006112995 >5k 0.0013031846183783257 0.6607303222601971 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAAACGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 5803 0.3081679645513907 No Hit AAAACGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 5035 0.26738337093163056 No Hit AAAACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 4979 0.26440949431352306 No Hit AAAACGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 4937 0.26217908684994246 No Hit AAAACGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 4837 0.2568685928890362 No Hit AAAACGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 4376 0.2323872157292583 No Hit AAAACGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTGC 4014 0.21316322759077758 No Hit AAAACGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 3803 0.20195808533326537 No Hit AAAACGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 3706 0.19680690619118626 No Hit AAAACGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 3618 0.19213367150558877 No Hit AAAACGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 2892 0.15357948534940924 No Hit AAAACGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 2892 0.15357948534940924 No Hit AAAACGGGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAACG 2849 0.15129597294621958 No Hit AAAACGGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 2607 0.1384445775608264 No Hit AAAACGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCAT 2490 0.13223129962656607 No Hit AAAACGGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 2486 0.13201887986812982 No Hit AAAACGGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTC 2335 0.12400003398716135 No Hit AAAACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2074 0.11013964474919599 No Hit AAAACGGGGGCTGCATCCACACTGACTGAGAGGCCTTGCTATAACCGGAGAG 1997 0.10605056439929815 No Hit AAAACGGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCA 1984 0.10536020018438036 No Hit AAAACGGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCATCA 1976 0.10493536066750785 No Hit AAAACGGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 1967 0.10445741621102629 No Hit AAAACGGGGGAGGAAGACGCAGTGGAATTCATCAGTGTGCCTGTACCAGAGT 1964 0.10429810139219911 No Hit AAAACGGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCGAT 1901 0.10095249019682814 No Hit AAAACGGGGCTTTCGCCGCCGGACGCCGCCGAGGTCGCACGCGTGAGGTCTG 1899 0.10084628031761002 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 3.1862963765437604E-4 0.0 0.0 0.0 0.0 8 7.434691545268775E-4 0.0 0.0 0.0 0.0 9 0.0023366173427987577 0.0 0.0 0.0 0.0 10 0.011258247197121287 0.0 0.0 0.0 0.0 11 0.019595722715744127 0.0 0.0 0.0 0.0 12 0.025118636435086647 0.0 0.0 0.0 0.0 13 0.030216710637556665 0.0 0.0 0.0 0.0 14 0.04105011831780545 0.0 0.0 0.0 0.0 15 0.048909649379946726 0.0 0.0 0.0 0.0 16 0.06367282259126615 0.0 0.0 0.0 0.0 17 0.07179787835145274 0.0 0.0 0.0 0.0 18 0.08018845880968464 0.0 0.0 0.0 0.0 19 0.08841972444908935 0.0 0.0 0.0 0.0 20 0.09426126780608625 0.0 0.0 0.0 0.0 21 0.1007400704383919 0.0 0.0 0.0 0.0 22 0.10631608909734348 0.0 0.0 0.0 0.0 23 0.11465356461596632 0.0 0.0 0.0 0.0 24 0.12150410182553541 0.0 0.0 0.0 0.0 25 0.12840774397471355 0.0 0.0 0.0 0.0 26 0.13541759600310982 0.0 0.0 0.0 0.0 27 0.14348954682368736 0.0 0.0 0.0 0.0 28 0.15198633716113738 0.0 0.0 0.0 0.0 29 0.15931481882718804 0.0 0.0 0.0 0.0 30 0.16579362145949367 0.0 0.0 0.0 0.0 31 0.17290968336710807 0.0 0.0 0.0 0.0 32 0.1792822761201956 0.0 0.0 0.0 0.0 33 0.1851238194771925 0.0 0.0 0.0 0.0 34 0.19245230114324313 0.0 0.0 0.0 0.0 35 0.20567543110589975 0.0 0.0 0.0 0.0 36 0.22006686973995573 0.0 0.0 0.0 0.0 37 0.22882918477545108 0.0 0.0 0.0 0.0 38 0.23552040716619296 0.0 0.0 0.0 0.0 39 0.24311441353028893 0.0 0.0 0.0 0.0 40 0.2520891483242205 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTAC 20 6.3124864E-4 46.0 35 CGTATAG 200 0.0 46.0 32 TTATGCG 25 3.4179935E-5 46.0 14 TAACGTA 20 6.3124864E-4 46.0 34 ATCACGC 20 6.3124864E-4 46.0 10 CGTTAGT 30 1.8620412E-6 46.0 30 CGCCTAT 30 1.8620412E-6 46.0 30 CATACTT 95 0.0 46.0 37 GCGATAG 20 6.3124864E-4 46.0 13 TCGTACA 20 6.3124864E-4 46.0 41 CGTAATA 25 3.4179935E-5 46.0 17 TATAGCG 25 3.4179935E-5 46.0 46 CGTAACC 25 3.4179935E-5 46.0 19 ATAACGT 20 6.3124864E-4 46.0 33 CGCACAT 60 0.0 46.0 23 TATCGCA 30 1.8620412E-6 46.0 31 TACACGG 40 5.6152203E-9 46.0 21 AATGCGA 35 1.0200347E-7 45.999996 46 ACGCTAA 35 1.0200347E-7 45.999996 28 CGTACAC 35 1.0200347E-7 45.999996 30 >>END_MODULE