##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527166_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1828888 Sequences flagged as poor quality 0 Sequence length 52 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.25038985438146 33.0 31.0 34.0 31.0 34.0 2 32.900172126450606 34.0 31.0 34.0 31.0 34.0 3 33.16805567098696 34.0 34.0 34.0 31.0 34.0 4 36.56480167183556 37.0 37.0 37.0 35.0 37.0 5 36.3683784900989 37.0 37.0 37.0 35.0 37.0 6 36.2320464675803 37.0 37.0 37.0 35.0 37.0 7 36.59359895193145 37.0 37.0 37.0 35.0 37.0 8 36.64317333811584 37.0 37.0 37.0 35.0 37.0 9 38.54186587697005 39.0 39.0 39.0 38.0 39.0 10 38.00273936949666 39.0 38.0 39.0 35.0 39.0 11 36.77916198258177 39.0 35.0 39.0 34.0 39.0 12 36.56674820984117 39.0 35.0 39.0 33.0 39.0 13 36.53140924977363 39.0 35.0 39.0 33.0 39.0 14 37.37562934416979 40.0 35.0 40.0 33.0 40.0 15 37.53580536369641 40.0 35.0 40.0 33.0 40.0 16 37.644441321721175 40.0 35.0 40.0 33.0 40.0 17 37.601470948467046 40.0 35.0 40.0 33.0 40.0 18 37.58949864617188 40.0 35.0 40.0 33.0 40.0 19 37.5178162905547 40.0 35.0 40.0 33.0 40.0 20 37.42859486201451 40.0 35.0 40.0 33.0 40.0 21 33.09146432148934 38.0 33.0 40.0 10.0 40.0 22 33.71737635109422 38.0 33.0 40.0 16.0 40.0 23 35.72562234538145 38.0 34.0 40.0 28.0 40.0 24 36.58054675846744 38.0 35.0 40.0 31.0 40.0 25 36.90254788702206 39.0 35.0 40.0 33.0 40.0 26 36.97781766844115 39.0 35.0 40.0 33.0 40.0 27 36.89436695959512 39.0 35.0 40.0 33.0 40.0 28 36.748631955592685 39.0 35.0 40.0 32.0 40.0 29 36.663340784126746 39.0 35.0 40.0 32.0 40.0 30 36.52007230623198 38.0 35.0 40.0 32.0 40.0 31 36.33744986024295 38.0 35.0 40.0 31.0 40.0 32 36.299934714427565 38.0 35.0 40.0 31.0 40.0 33 35.88588584976226 37.0 35.0 40.0 31.0 40.0 34 35.77611313541343 37.0 35.0 40.0 30.0 40.0 35 35.63007521510338 37.0 34.0 40.0 30.0 40.0 36 35.482973807034654 37.0 34.0 40.0 30.0 40.0 37 35.327799187265704 36.0 34.0 40.0 30.0 40.0 38 35.21979476053208 36.0 34.0 40.0 30.0 40.0 39 35.03940864612814 35.0 34.0 40.0 30.0 40.0 40 30.236937964489897 35.0 29.0 39.0 8.0 40.0 41 30.96735502666101 35.0 29.0 38.0 12.0 40.0 42 32.688265219083945 35.0 30.0 38.0 23.0 40.0 43 33.54993854188994 35.0 32.0 38.0 26.0 40.0 44 34.31126947084786 35.0 33.0 39.0 28.0 40.0 45 34.587847369549145 35.0 34.0 39.0 29.0 40.0 46 34.63139404928022 35.0 34.0 39.0 30.0 40.0 47 34.57988406069699 35.0 34.0 38.0 30.0 40.0 48 34.43607645738832 35.0 34.0 38.0 29.0 40.0 49 34.283143637007846 35.0 34.0 37.0 29.0 40.0 50 34.18207293174869 35.0 34.0 37.0 29.0 40.0 51 34.047205733757345 35.0 34.0 37.0 29.0 40.0 52 33.6648564592255 35.0 33.0 36.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 3.0 14 12.0 15 37.0 16 116.0 17 218.0 18 448.0 19 865.0 20 1552.0 21 2566.0 22 3807.0 23 5759.0 24 7934.0 25 10775.0 26 14327.0 27 18758.0 28 24451.0 29 31872.0 30 42292.0 31 62106.0 32 89389.0 33 108901.0 34 214548.0 35 224130.0 36 241486.0 37 270929.0 38 317406.0 39 134199.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 100.0 0.0 0.0 0.0 7 99.61047368674298 0.3198664981125143 0.04439856349869429 0.025261251645808818 8 99.12198013218962 0.6770780933550878 0.11351159830454353 0.0874301761507539 9 94.04999103280245 2.7752929649054505 1.734332556176212 1.4403834461158913 10 55.31372068710605 29.42881138702862 6.089109885351099 9.168358040514237 11 34.93144468113958 22.3977630122785 20.85305387754745 21.81773842903447 12 28.241313847540145 16.715403020852015 28.603993246169257 26.439289885438583 13 24.48307386783663 17.53059782775107 30.112341488379823 27.873986816032474 14 24.303237814453375 17.855111958742143 31.763235364877456 26.07841486192703 15 25.605668581126896 18.73192890980749 27.56642287553967 28.095979633525946 16 30.003040098682916 19.418520981055153 24.633821207203503 25.944617713058427 17 30.022505478738992 19.889845632974794 23.05548508164524 27.032163806640973 18 29.984066820931627 19.59912252691253 22.623856682311875 27.79295396984397 19 28.834570514979596 19.736036323711456 22.439044927846865 28.990348233462083 20 28.797772198188188 21.486280187742494 23.867727274715563 25.84822033935375 21 34.796444615525935 18.49626658384767 23.678267887371998 23.029020913254392 22 31.06286442909571 18.61989361841731 24.714197916985622 25.603044035501355 23 29.72226839478415 20.369098599804907 23.316572693352462 26.592060312058475 24 29.978653695578956 20.66873422538723 22.0687106044766 27.283901474557215 25 29.063398086706236 20.65473664871769 22.021250071081443 28.260615193494626 26 28.505244717008367 20.6345057761875 21.67601296525539 29.184236541548746 27 29.525974253207416 18.602068579377196 22.833218873982442 29.038738293432946 28 29.997845685465702 20.072579622152915 21.63035680697779 28.29921788540359 29 29.01823403073343 19.91297444129985 22.844865295195767 28.223926232770953 30 28.87224368031285 20.39600019246668 23.425600692880046 27.30615543434043 31 30.862032010708145 20.826480353088872 21.248376062394197 27.063111573808783 32 32.640599096281456 19.755720415902996 21.695150277108276 25.90853021070727 33 32.08047731736443 20.67786545704275 22.13957333636614 25.102083889226677 34 29.166520858576362 22.048862478183466 24.2422171286596 24.542399534580575 35 30.034042543884592 23.200873973693305 23.775868177821717 22.989215304600393 36 30.875318772937437 21.74878942833022 22.21163898500072 25.164252813731625 37 31.288137928621108 22.369385112702364 21.027039381307112 25.31543757736942 38 31.030713745182865 22.38250784083006 21.880563489945803 24.706214924041277 39 31.636874428614547 20.325192138611005 22.231432433259993 25.80650099951446 40 28.920524384215984 26.659861074051555 20.55828459697915 23.861329944753315 41 28.3301656525714 21.88816373665309 22.297920922440305 27.48374968833521 42 26.75937509568656 20.470745064760663 24.570175975784192 28.199703863768583 43 27.964424284045826 19.48566560664185 25.35743030737804 27.19247980193429 44 26.28170779183854 20.46735502666101 25.491938270686887 27.758998910813563 45 27.70787494914943 19.1630105288022 24.117223143243326 29.011891378805043 46 28.645821942076278 20.602300414240784 23.293881309298328 27.45799633438461 47 27.56642287553967 20.248806925301057 24.862211354659223 27.322558844500044 48 29.020257117986446 20.638606628727402 24.62080783514354 25.720328418142607 49 27.74018966716387 21.415854880123877 24.145929111022653 26.698026341689594 50 25.599435285266235 22.19436072629926 24.140680019771576 28.065523968662927 51 26.09727878361059 22.27747133777465 23.875983657829238 27.74926622078553 52 27.589168937627672 21.505308143527653 23.8920043217518 27.01351859709288 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 18.0 6 36.0 7 416.0 8 796.0 9 1920.5 10 3045.0 11 2450.0 12 1855.0 13 1933.0 14 2051.0 15 2091.0 16 2507.5 17 2924.0 18 3065.5 19 3207.0 20 3411.0 21 3615.0 22 3988.5 23 4362.0 24 5081.5 25 5801.0 26 6603.0 27 7405.0 28 9163.0 29 10921.0 30 12153.5 31 13386.0 32 16546.5 33 19707.0 34 20920.0 35 22133.0 36 22737.5 37 23342.0 38 24199.0 39 28412.0 40 31768.0 41 34005.0 42 36242.0 43 41190.0 44 46138.0 45 49992.0 46 53846.0 47 56263.0 48 58680.0 49 68732.5 50 78785.0 51 90004.0 52 101223.0 53 108023.5 54 114824.0 55 138092.0 56 161360.0 57 180670.5 58 199981.0 59 182273.5 60 164566.0 61 160002.0 62 155438.0 63 145355.0 64 122216.0 65 109160.0 66 90218.5 67 71277.0 68 63799.0 69 56321.0 70 48942.0 71 41563.0 72 39641.0 73 37719.0 74 26516.0 75 15313.0 76 9884.5 77 4456.0 78 3439.5 79 2423.0 80 1563.5 81 704.0 82 400.0 83 96.0 84 58.5 85 21.0 86 14.0 87 7.0 88 5.5 89 4.0 90 4.0 91 4.0 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1828888.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.518643676515397 #Duplication Level Percentage of deduplicated Percentage of total 1 72.9137947347476 6.940404311826469 2 9.041865861767315 1.7213259861802381 3 3.8953111212290685 1.1123423571644153 4 2.0220198829186926 0.7698754708932967 5 1.210723425161266 0.5762222437460173 6 0.7378162273514893 0.421380586014582 7 0.5003170856355422 0.3333638044406157 8 0.35367063902572354 0.269317183338509 9 0.24959937186594897 0.2138262734406627 >10 3.5824955125829625 9.281619510358134 >50 2.778790806350894 19.30050117805169 >100 2.550606643894979 42.76105440781129 >500 0.11242893135582979 7.320222500607877 >1k 0.049229236214978725 8.263745989008028 >5k 0.0013305198977021278 0.7147981971181809 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAAACGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 6035 0.32998193437761086 No Hit AAAACGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 5253 0.2872237118948782 No Hit AAAACGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 4843 0.26480571801006947 No Hit AAAACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 4781 0.26141567991041553 No Hit AAAACGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 4693 0.25660401293026147 No Hit AAAACGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 4370 0.23894300799174145 No Hit AAAACGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTGC 3796 0.20755781655300926 No Hit AAAACGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 3769 0.2060815096386438 No Hit AAAACGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 3626 0.19826255079589344 No Hit AAAACGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 3469 0.1896780994790277 No Hit AAAACGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 2974 0.1626124727156611 No Hit AAAACGGGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAACG 2840 0.15528561617769923 No Hit AAAACGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 2823 0.15435608960198766 No Hit AAAACGGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 2599 0.14210821001614096 No Hit AAAACGGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 2548 0.1393196302890062 No Hit AAAACGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCAT 2317 0.12668900446610182 No Hit AAAACGGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTC 2240 0.122478795858467 No Hit AAAACGGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 2013 0.11006688217102414 No Hit AAAACGGGGGCTGCATCCACACTGACTGAGAGGCCTTGCTATAACCGGAGAG 2009 0.1098481700355626 No Hit AAAACGGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCATCA 2003 0.10952010183237026 No Hit AAAACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1920 0.10498182502154314 No Hit AAAACGGGGCTTTCGCCGCCGGACGCCGCCGAGGTCGCACGCGTGAGGTCTG 1889 0.10328680597171615 No Hit AAAACGGGGGAGGAAGACGCAGTGGAATTCATCAGTGTGCCTGTACCAGAGT 1850 0.10115436265096606 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 3.2806820319232233E-4 0.0 0.0 0.0 0.0 8 9.84204609576967E-4 0.0 0.0 0.0 0.0 9 0.003116647930327062 0.0 0.0 0.0 0.0 10 0.0122478795858467 0.0 0.0 0.0 0.0 11 0.019848126293135503 0.0 0.0 0.0 0.0 12 0.02783111923748201 0.0 0.0 0.0 0.0 13 0.03444716133519384 0.0 0.0 0.0 0.0 14 0.045710836311463575 0.0 0.0 0.0 0.0 15 0.054295287628329345 0.0 0.0 0.0 0.0 16 0.0646294360288875 0.0 0.0 0.0 0.0 17 0.070917409923407 0.0 0.0 0.0 0.0 18 0.07676795954700343 0.0 0.0 0.0 0.0 19 0.08502434266067688 0.0 0.0 0.0 0.0 20 0.08967197553923477 0.0 0.0 0.0 0.0 21 0.09623333960308121 0.0 0.0 0.0 0.0 22 0.10274002563306228 0.0 0.0 0.0 0.0 23 0.10957477986623566 0.0 0.0 0.0 0.0 24 0.11733906067512062 0.0 0.0 0.0 0.0 25 0.12368171260350552 0.0 0.0 0.0 0.0 26 0.13073517897214046 0.0 0.0 0.0 0.0 27 0.1389915620858139 0.0 0.0 0.0 0.0 28 0.1487242521138528 0.0 0.0 0.0 0.0 29 0.15380930926333378 0.0 0.0 0.0 0.0 30 0.1609174536658341 0.0 0.0 0.0 0.0 31 0.1681349541360652 0.0 0.0 0.0 0.0 32 0.17431357196285394 0.0 0.0 0.0 0.0 33 0.18005476551871957 0.0 0.0 0.0 0.0 34 0.18683484171802756 0.0 0.0 0.0 0.0 35 0.2013791987262205 0.0 0.0 0.0 0.0 36 0.2124788396008941 0.0 0.0 0.0 0.0 37 0.2200790863081829 0.0 0.0 0.0 0.0 38 0.22778868908320246 0.0 0.0 0.0 0.0 39 0.2343500531470489 0.0 0.0 0.0 0.0 40 0.24315321659937622 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGAC 35 1.0200165E-7 46.000004 45 TATTAGC 35 1.0200165E-7 46.000004 25 CGATATT 35 1.0200165E-7 46.000004 27 CACGCTA 25 3.4179546E-5 46.0 27 TCGATTG 30 1.8620121E-6 46.0 28 TCGATAG 50 1.6370905E-11 46.0 24 ATACTCC 60 0.0 46.0 22 CGTTAGT 30 1.8620121E-6 46.0 30 TCGGATA 30 1.8620121E-6 46.0 15 ACGCTAA 30 1.8620121E-6 46.0 28 GTATATC 20 6.3124386E-4 46.0 23 TATAGCG 20 6.3124386E-4 46.0 46 CGCACAT 50 1.6370905E-11 46.0 23 CCGTTAT 20 6.3124386E-4 46.0 14 ATCGATT 30 1.8620121E-6 46.0 11 AAAACGG 186845 0.0 44.85151 1 ACGGGGG 97795 0.0 44.831127 4 AAACGGG 185505 0.0 44.827095 2 AACGGGG 174320 0.0 44.81253 3 ACGGGGA 51610 0.0 44.75218 4 >>END_MODULE