##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527162_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2172424 Sequences flagged as poor quality 0 Sequence length 50 %GC 59 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.38776132099443 33.0 31.0 34.0 31.0 34.0 2 32.31037403379819 33.0 31.0 34.0 31.0 34.0 3 32.80699808140584 34.0 31.0 34.0 31.0 34.0 4 36.47410542325071 37.0 37.0 37.0 35.0 37.0 5 36.530542380308816 37.0 37.0 37.0 35.0 37.0 6 36.17368478713179 37.0 37.0 37.0 35.0 37.0 7 36.56367357385115 37.0 37.0 37.0 35.0 37.0 8 36.63056198974049 37.0 37.0 37.0 35.0 37.0 9 38.65421805319772 39.0 39.0 39.0 38.0 39.0 10 38.02749647398482 39.0 38.0 39.0 35.0 39.0 11 36.58728728830099 38.0 35.0 39.0 33.0 39.0 12 36.300995569925576 39.0 35.0 39.0 33.0 39.0 13 36.24373695006131 38.0 35.0 39.0 33.0 39.0 14 36.904230021395456 39.0 35.0 40.0 33.0 40.0 15 36.97649584059097 39.0 35.0 40.0 33.0 40.0 16 36.89159160458548 39.0 35.0 40.0 33.0 40.0 17 36.74513538793532 39.0 35.0 40.0 31.0 40.0 18 36.78551332520723 39.0 35.0 40.0 32.0 40.0 19 36.5880044595346 39.0 35.0 40.0 31.0 40.0 20 36.33834693411599 38.0 35.0 40.0 31.0 40.0 21 36.52900446689965 39.0 35.0 40.0 31.0 40.0 22 36.41395464237184 38.0 35.0 40.0 31.0 40.0 23 36.4780793252146 38.0 35.0 40.0 31.0 40.0 24 36.58936054840123 38.0 35.0 40.0 32.0 40.0 25 36.514490265252086 38.0 35.0 40.0 32.0 40.0 26 36.3700249122639 38.0 35.0 40.0 31.0 40.0 27 36.225280147890096 38.0 35.0 40.0 31.0 40.0 28 36.011680040360446 38.0 35.0 40.0 31.0 40.0 29 36.29165577253796 38.0 35.0 40.0 31.0 40.0 30 36.30899492916668 38.0 35.0 40.0 32.0 40.0 31 36.23064144016085 38.0 35.0 40.0 31.0 40.0 32 35.504620184641674 37.0 35.0 40.0 30.0 40.0 33 35.6992539209657 37.0 35.0 40.0 30.0 40.0 34 35.3979609873579 37.0 34.0 40.0 29.0 40.0 35 35.46524527440315 37.0 34.0 40.0 30.0 40.0 36 35.35752551067379 36.0 34.0 40.0 30.0 40.0 37 35.34184026690922 36.0 34.0 40.0 30.0 40.0 38 35.179553807175765 36.0 34.0 40.0 30.0 40.0 39 35.13584640935655 35.0 34.0 40.0 30.0 40.0 40 34.973888614745555 35.0 34.0 40.0 29.0 40.0 41 34.82413654056482 35.0 34.0 39.0 29.0 40.0 42 34.72317420540374 35.0 34.0 39.0 29.0 40.0 43 34.66303999587557 35.0 34.0 39.0 29.0 40.0 44 34.53457198042371 35.0 34.0 39.0 29.0 40.0 45 34.43294080713525 35.0 34.0 39.0 28.0 40.0 46 34.125066745718144 35.0 34.0 39.0 27.0 40.0 47 34.07181793241099 35.0 34.0 38.0 27.0 40.0 48 33.96603379450789 35.0 33.0 38.0 27.0 40.0 49 33.75063063195766 35.0 33.0 37.0 26.0 40.0 50 33.288043218082656 35.0 33.0 37.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 0.0 10 0.0 11 1.0 12 0.0 13 2.0 14 15.0 15 47.0 16 161.0 17 330.0 18 668.0 19 1278.0 20 2066.0 21 3285.0 22 5054.0 23 7158.0 24 9877.0 25 13687.0 26 18139.0 27 23383.0 28 30206.0 29 37562.0 30 48241.0 31 60334.0 32 79413.0 33 125019.0 34 288732.0 35 225428.0 36 232408.0 37 320414.0 38 476596.0 39 162919.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 0.0 100.0 5 0.0 0.0 0.0 100.0 6 100.0 0.0 0.0 0.0 7 99.20342437756166 0.5920575357296733 0.12635654918192765 0.07816153752674432 8 99.16084521253677 0.5754861850172894 0.09970429345284346 0.1639643089930879 9 96.1348705409257 1.8354151859857928 1.299331990440172 0.7303822826483228 10 54.18748826195991 30.835509090306495 6.187051883057819 8.789950764675773 11 40.720503916362546 24.186208585432677 19.62347129289678 15.469816205307987 12 35.364275113882 16.499403431374354 23.772108943742108 24.364212511001533 13 26.14636921705892 15.651502653257376 26.903956133793404 31.298171995890307 14 23.19699101096287 18.478897305498375 30.5762595147172 27.747852168821556 15 27.413341042080187 20.248533435461955 27.667158897158195 24.670966625299666 16 35.53325685961856 20.453373742878924 22.74961057325826 21.263758824244256 17 32.71322725213863 21.451981749419083 23.655833299576877 22.178957698865414 18 32.86089639959787 21.666074394317132 22.90832728785909 22.564701918225907 19 30.391719111922903 24.425572540167114 23.10023273541445 22.082475612495536 20 33.494290249048994 24.4115789551211 21.58639381630842 20.507736979521493 21 30.85755819305992 22.90749872032347 25.224495770623044 21.010447315993563 22 28.964511531818836 20.89007486568 27.52565797468634 22.61975562781483 23 27.700992071529313 21.27660162104635 27.750614060606953 23.27179224681738 24 31.261807087382575 21.712197987133266 23.678388749157623 23.347606176326536 25 27.561148284128695 23.52933865580568 22.042566276196542 26.86694678386908 26 25.406228250102192 23.037629854945443 25.17312458341466 26.38301731153771 27 24.03310771746215 21.04386620659687 25.694799910146454 29.228226165794524 28 24.593403497659757 25.917592514168504 22.518118010112207 26.970885978059535 29 29.353201769083753 23.098667663402725 22.299652369887276 25.248478197626245 30 28.032695274955532 21.566784384632097 25.54340220877692 24.857118131635445 31 32.30773550651254 21.088424727401282 22.98211583005896 23.621723936027223 32 33.245627925303715 20.50341001572437 23.134848445791427 23.116113613180485 33 35.00140856481055 20.809933972373717 22.529856050200145 21.658801412615585 34 28.269297337904568 21.496356144104467 29.034019141751333 21.20032737623963 35 25.96127643590754 27.911079973338538 26.047861743379748 20.07978184737418 36 25.538200645914426 29.287054460823487 23.690310915364588 21.484433977897503 37 30.24497059505879 27.343419148379873 20.74940251074376 21.662207745817575 38 28.891505525624833 28.121213906677518 21.410369246519096 21.576911321178553 39 30.965410067279684 24.352198281735056 21.08069143040217 23.60170022058309 40 27.68060010384713 23.188889461725704 22.215598796551685 26.914911637875477 41 24.756493207587468 26.015639672550112 22.074742315496422 27.153124804365998 42 23.367169576473103 22.629192091414936 23.827162653331023 30.17647567878094 43 23.620895368491603 21.38385508537928 25.89908783920634 29.096161706922775 44 25.013671364337714 21.50666720676995 24.072050391636253 29.407611037256075 45 27.349955625605315 22.230466980663074 23.617304909170585 26.802272484561023 46 25.745204435229958 24.85665781633788 23.608743044635855 25.789394703796315 47 25.374006179272556 23.153675341461888 24.667330134448893 26.804988344816667 48 25.339896815722895 22.842179979598825 27.823389909152173 23.994533295526104 49 28.896384867779034 21.377364639683595 24.86116890625403 24.865081586283342 50 23.980907962718142 22.299146023059954 25.760348808519883 27.959597205702018 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 23.5 10 47.0 11 25.5 12 4.0 13 19.5 14 35.0 15 361.0 16 687.0 17 1745.5 18 2804.0 19 3387.5 20 3971.0 21 4182.0 22 4393.0 23 4783.5 24 5174.0 25 5137.5 26 5101.0 27 5291.0 28 5481.0 29 6834.5 30 8188.0 31 9756.0 32 11324.0 33 14844.0 34 18364.0 35 19381.0 36 20398.0 37 22733.0 38 25068.0 39 31204.5 40 37341.0 41 39058.5 42 40776.0 43 43482.0 44 46188.0 45 53580.5 46 60973.0 47 67412.5 48 73852.0 49 75792.0 50 77732.0 51 84018.0 52 90304.0 53 96209.0 54 102114.0 55 105495.0 56 108876.0 57 118927.0 58 128978.0 59 131981.0 60 134984.0 61 152292.0 62 169600.0 63 177645.5 64 185691.0 65 204087.5 66 222484.0 67 212770.5 68 203057.0 69 163627.5 70 124198.0 71 101891.5 72 79585.0 73 71047.0 74 62509.0 75 51685.5 76 40862.0 77 34417.5 78 27973.0 79 27581.5 80 27190.0 81 18883.5 82 10577.0 83 7021.0 84 3465.0 85 2319.0 86 1173.0 87 868.5 88 564.0 89 400.5 90 237.0 91 163.0 92 89.0 93 48.5 94 8.0 95 4.5 96 1.0 97 2.5 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2172424.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.311619092717009 #Duplication Level Percentage of deduplicated Percentage of total 1 66.00241483824082 4.825845164967101 2 10.948684047318427 1.6010521464099907 3 4.848744199367505 1.0635651199138891 4 2.5345165844896673 0.7412567939985022 5 1.5339035832620962 0.5607659362883088 6 0.9220850261406144 0.4045160689342907 7 0.6089016889812917 0.31164400503202727 8 0.4432257263501614 0.2592558146532164 9 0.3360950949507227 0.2211659381889216 >10 4.746067475515811 9.333348569096104 >50 3.5442503771950626 18.93884345765529 >100 3.336653876881135 42.949618729436715 >500 0.1267915334195824 6.2147508206862465 >1k 0.0624103402842504 7.7746949219407115 >5k 0.0032847547518026527 1.672871450128996 >10k+ 0.001970852851081592 3.1268050626696855 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTCCCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 35397 1.629378058795152 No Hit GTCCCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 17531 0.8069787481633419 No Hit GTCCCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 12168 0.5601116540785777 No Hit GTCCCGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 8401 0.38671088148538224 No Hit GTCCCGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 7976 0.36714748133881786 No Hit GTCCCGGGGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACTGACTGCT 7796 0.35886180598262585 No Hit GTCCCGGGGAGCTTTGGCACGTCCAGAGTTCTTTGTCATTACCTTTATGT 5469 0.25174643623896625 No Hit GTCCCGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 5185 0.23867348178808556 No Hit GTCCCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 4537 0.20884505050579447 No Hit GTCCCGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 4478 0.20612919025015372 No Hit GTCCCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 4263 0.19623241135247999 No Hit GTCCCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGA 4246 0.19544987534661742 No Hit GTCCCGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 4103 0.18886736659142048 No Hit GTCCCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 3426 0.1577040209461873 No Hit GTCCCGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 3412 0.1570595795295946 No Hit GTCCCGGGGGGAGCTGGAGAGATGGCTCAGTGGTTAAGAGCATCCTCTGC 3216 0.14803739969729665 No Hit GTCCCGGGGGGGTCCCTTCGCGTCGTGCAGGGACGGATTCGGGGTGGCGG 3178 0.14628820156654504 No Hit GTCCCGGGGGGGGTTGGGGATTTAGCTCAGTGGTAAAGTGCTTGCCTAGC 2772 0.12759940048535645 No Hit GTCCCGGGGTGTCCCTTCCCCAGCACTCCTGAACCATTCTCCTCCACCTC 2770 0.1275073374258432 No Hit GTCCCGGGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTG 2675 0.12313434209896411 No Hit GTCCCGGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTGTCCCGGGGA 2639 0.12147720702772571 No Hit GTCCCGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCT 2620 0.1206026079623499 No Hit GTCCCGGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGC 2566 0.1181169053554923 No Hit GTCCCGGGGATGGCTACAGAAAACACGGGGTATGTAGGCTCCTGAGTCAT 2395 0.11024551376710992 No Hit GTCCCGGGGGTCCAGGTCTGGTTAATTGCCAGGGTAGCAAAGAATTGCAT 2340 0.1077137796304957 No Hit GTCCCGGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 2220 0.10218999605970105 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 9.206305951324419E-5 0.0 0.0 0.0 0.0 8 1.3809458926986628E-4 0.0 0.0 0.0 0.0 9 5.523783570794651E-4 0.0 0.0 0.0 0.0 10 0.0045571214459055875 0.0 0.0 0.0 0.0 11 0.014453900343579337 0.0 0.0 0.0 0.0 12 0.019701494735834258 0.0 0.0 0.0 0.0 13 0.023015764878311046 0.0 0.0 0.0 0.0 14 0.04566327751856912 0.0 0.0 0.0 0.0 15 0.052798164630845544 0.0 0.0 0.0 0.0 16 0.0606235246894713 0.0 0.0 0.0 0.0 17 0.06577905602221297 0.0 0.0 0.0 0.0 18 0.06881713698615004 0.0 0.0 0.0 0.0 19 0.0756298033901301 0.0 0.0 0.0 0.0 20 0.08258056438338005 0.0 0.0 0.0 0.0 21 0.08621705523415318 0.0 0.0 0.0 0.0 22 0.08994560914443958 0.0 0.0 0.0 0.0 23 0.09565351883426071 0.0 0.0 0.0 0.0 24 0.10223602758945767 0.0 0.0 0.0 0.0 25 0.10614870761877056 0.0 0.0 0.0 0.0 26 0.11116614436224236 0.0 0.0 0.0 0.0 27 0.11738040087938635 0.0 0.0 0.0 0.0 28 0.14596598085824866 0.0 0.0 0.0 0.0 29 0.15319293103003834 0.0 0.0 0.0 0.0 30 0.16410240358235778 0.0 0.0 0.0 0.0 31 0.17160554293268718 0.0 0.0 0.0 0.0 32 0.17768170486056128 0.0 0.0 0.0 0.0 33 0.18320548843135595 0.0 0.0 0.0 0.0 34 0.1933324249778128 0.0 0.0 0.0 0.0 35 0.233748108104127 0.0 0.0 0.0 0.0 36 0.2435528239422875 0.0 0.0 0.0 0.0 37 0.25197659388774934 0.0 0.0 0.0 0.0 38 0.259571796297592 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGAAC 40 8.3182385E-9 44.000004 22 ACGTTAG 30 2.528761E-6 44.000004 24 CCGTACG 30 2.528761E-6 44.000004 25 GCGATAT 40 8.3182385E-9 44.000004 17 ATTGCGC 20 7.85803E-4 44.000004 12 CTTACGA 30 2.528761E-6 44.000004 35 CGTATAC 25 4.4441524E-5 44.0 38 GCGTAAG 35 1.4468787E-7 44.0 31 CGCTTAT 25 4.4441524E-5 44.0 39 GTCCCGG 221375 0.0 42.82534 1 TCCCGGG 220010 0.0 42.797054 2 CCCGGGG 212625 0.0 42.74286 3 CCGGGGG 116610 0.0 42.718983 4 CGGGGGG 54030 0.0 42.546364 5 CGGGGGA 28495 0.0 42.49447 5 CCGGGGA 67145 0.0 42.394516 4 CGGGGAG 25870 0.0 42.358715 5 CGGGGAA 14295 0.0 42.21476 5 CGGGGGC 16755 0.0 42.188 5 CGGGGGT 18275 0.0 41.85718 5 >>END_MODULE