##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527161_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2319218 Sequences flagged as poor quality 0 Sequence length 52 %GC 59 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.33920787092891 33.0 31.0 34.0 31.0 34.0 2 32.23724591651151 33.0 31.0 34.0 31.0 34.0 3 32.76099831926106 34.0 31.0 34.0 31.0 34.0 4 36.411444719728806 37.0 37.0 37.0 35.0 37.0 5 36.48644499999569 37.0 37.0 37.0 35.0 37.0 6 36.21445590712042 37.0 37.0 37.0 35.0 37.0 7 36.56202564830042 37.0 37.0 37.0 35.0 37.0 8 36.592221602281455 37.0 37.0 37.0 35.0 37.0 9 38.61943379190745 39.0 39.0 39.0 38.0 39.0 10 37.921899105646816 39.0 38.0 39.0 35.0 39.0 11 36.50989730159045 38.0 35.0 39.0 33.0 39.0 12 36.261430361440794 39.0 35.0 39.0 33.0 39.0 13 36.248078015951926 38.0 35.0 39.0 33.0 39.0 14 36.911313641063494 39.0 35.0 40.0 33.0 40.0 15 36.888672819890154 39.0 35.0 40.0 33.0 40.0 16 31.98600476539937 38.0 33.0 40.0 3.0 40.0 17 33.26472285054704 38.0 32.0 40.0 16.0 40.0 18 35.22745554751645 38.0 33.0 40.0 27.0 40.0 19 36.12014135799222 38.0 34.0 40.0 30.0 40.0 20 36.47059181155027 38.0 35.0 40.0 31.0 40.0 21 36.68715230737257 39.0 35.0 40.0 32.0 40.0 22 36.76072193299638 39.0 35.0 40.0 32.0 40.0 23 36.73919786755708 38.0 35.0 40.0 32.0 40.0 24 36.7517766764487 38.0 35.0 40.0 32.0 40.0 25 36.67710366166527 38.0 35.0 40.0 32.0 40.0 26 36.543433174457945 38.0 35.0 40.0 32.0 40.0 27 36.40115806276081 38.0 35.0 40.0 32.0 40.0 28 36.27195244259056 38.0 35.0 40.0 31.0 40.0 29 36.05299846758692 38.0 35.0 40.0 31.0 40.0 30 35.95456399527772 37.0 35.0 40.0 31.0 40.0 31 35.84551732523635 37.0 34.0 40.0 31.0 40.0 32 35.73960360776779 37.0 34.0 40.0 31.0 40.0 33 35.42274508045384 37.0 34.0 40.0 30.0 40.0 34 34.9449185027022 36.0 34.0 40.0 27.0 40.0 35 34.95813675126702 36.0 34.0 40.0 28.0 40.0 36 34.998745266723525 35.0 34.0 40.0 29.0 40.0 37 34.76308738548942 35.0 34.0 39.0 28.0 40.0 38 34.78903190644433 35.0 34.0 39.0 29.0 40.0 39 34.43027046185395 35.0 33.0 39.0 28.0 40.0 40 34.321483362064285 35.0 33.0 39.0 27.0 40.0 41 34.24266455331064 35.0 33.0 39.0 27.0 40.0 42 34.191367952473634 35.0 33.0 39.0 27.0 40.0 43 34.14269809910064 35.0 33.0 38.0 27.0 40.0 44 34.48349529884642 35.0 34.0 39.0 29.0 40.0 45 34.56604036360532 35.0 34.0 39.0 29.0 40.0 46 34.49941359544467 35.0 34.0 38.0 29.0 40.0 47 34.25506011077872 35.0 34.0 38.0 29.0 40.0 48 34.207274607216746 35.0 34.0 38.0 28.0 40.0 49 34.19786540118264 35.0 34.0 37.0 29.0 40.0 50 33.717642325990916 35.0 33.0 37.0 27.0 40.0 51 33.79954363927841 35.0 33.0 37.0 27.0 40.0 52 33.47135715573094 35.0 33.0 36.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 1.0 14 15.0 15 40.0 16 132.0 17 303.0 18 609.0 19 1235.0 20 2040.0 21 3473.0 22 5276.0 23 7649.0 24 11197.0 25 15620.0 26 21120.0 27 26941.0 28 34089.0 29 43582.0 30 56140.0 31 76162.0 32 110967.0 33 174789.0 34 305709.0 35 261563.0 36 293221.0 37 360594.0 38 390274.0 39 116476.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 0.0 100.0 5 0.0 0.0 0.0 100.0 6 100.0 0.0 0.0 0.0 7 99.19261578687298 0.6010646692117774 0.1250852658094237 0.0812342781058098 8 99.11771985212256 0.5978308205610685 0.11745338299375048 0.1669959443226122 9 96.16086111784232 1.8376452752608856 1.2680567329160088 0.7334368739807987 10 54.343921097542356 30.723718080835866 6.108007095495119 8.824353726126652 11 40.86485185954921 24.169827933380994 19.45944710674029 15.505873100329506 12 35.50834807249685 16.454641176465515 23.5709622812517 24.466048469785935 13 26.242595564539428 15.602371144066666 26.714306287722845 31.440727003671064 14 23.266118148444864 18.36955387548734 30.611826917521334 27.752501058546457 15 27.617024359072754 20.14489366674457 27.72231847113984 24.515763503042837 16 33.14561201232485 28.174884810311063 20.219013477818816 18.460489699545278 17 32.95438376211292 21.345686347725827 23.56850455627716 22.131425333884096 18 33.041783911646085 21.565113758171936 22.828556867012935 22.56454546316905 19 30.50769699096851 24.41215099227412 22.980504635614246 22.099647381143125 20 33.49046963243645 24.450137934424447 21.462622314935466 20.596770118203636 21 31.00213089067091 22.92151923622531 25.041199231810037 21.035150641293747 22 28.738393717192608 20.824001883393453 27.688945153064527 22.748659246349415 23 27.92411062694408 21.126258937279722 27.624871831798476 23.32475860397772 24 31.374670255232584 21.64764157573803 23.576912562769003 23.400775606260385 25 27.656434194629398 23.41547883812561 21.91406758657444 27.01401938067055 26 25.43318480625797 22.94251769346392 25.147873119301416 26.47642438097669 27 24.128262198723878 20.89221453093241 25.558701251887488 29.42082201845622 28 24.622308036588194 25.934129521243797 22.4511882884662 26.99237415370181 29 29.723596488126603 23.0724321732584 22.02233683940018 25.181634499214823 30 28.13939871111728 21.492330604539976 25.450518235025772 24.917752449316968 31 32.41795294793331 21.10008632219998 22.856066139534963 23.625894590331743 32 33.466970332241296 20.007778483954507 23.287935847341647 23.23731533646255 33 35.383392160633456 20.747424347344666 22.332182658120107 21.53700083390177 34 28.427728656814494 21.345643229743818 28.961486156109515 21.26514195733217 35 26.007904388461974 27.926352762008573 26.053997511230076 20.011745338299374 36 25.550163891449618 29.36351822036566 23.631068748172876 21.455249140011848 37 30.413570436241873 27.266302693407862 20.64501914007221 21.67510773027805 38 28.877664799083142 28.17350503488676 21.27855164973711 21.670278516292992 39 31.27480900889869 24.307848593793253 20.973103865182143 23.444238532125915 40 27.74991397962589 23.116412514908042 22.14673221749745 26.98694128796862 41 24.87416016950541 26.007861270479964 21.79419959658816 27.323778963426467 42 23.278967307083683 22.639829459757557 23.795003315772817 30.286199917385947 43 23.622402033788976 21.29303929169229 25.71940197083672 29.365156703682015 44 24.956903576981553 21.379189019747173 23.992181847502046 29.67172555576923 45 27.330807194494007 22.197525200304586 23.611363830394556 26.860303774806855 46 25.42615657519043 24.827851456827258 23.716097408695518 26.02989455928679 47 25.627431315210558 23.16949075076168 24.53365746557676 26.669420468451005 48 25.424474973892064 22.792035936250926 27.81346988510783 23.97001920474919 49 29.130206819712505 21.20676020969137 24.892054132039334 24.77097883855679 50 24.03361822821313 22.420876347113552 25.53011402981522 28.015391394858096 51 23.545307081956075 22.967138061191317 27.463826168993172 26.023728687859442 52 23.4528190105458 22.6094744004229 25.447586212249128 28.490120376782173 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 23.5 10 47.0 11 26.5 12 6.0 13 23.5 14 385.5 15 730.0 16 1807.0 17 2884.0 18 3461.0 19 4038.0 20 4254.5 21 4471.0 22 4940.0 23 5409.0 24 5132.0 25 4855.0 26 4787.5 27 4720.0 28 5686.5 29 6653.0 30 7949.5 31 9246.0 32 12162.0 33 15078.0 34 17571.5 35 20065.0 36 21593.5 37 23122.0 38 27501.0 39 33393.0 40 34906.0 41 39528.0 42 44150.0 43 48615.5 44 53081.0 45 58401.5 46 63722.0 47 70848.0 48 77974.0 49 79278.5 50 80583.0 51 87604.5 52 94626.0 53 96483.0 54 98340.0 55 105511.5 56 112683.0 57 121587.0 58 130491.0 59 142756.0 60 155021.0 61 161111.5 62 167202.0 63 183824.5 64 213238.5 65 226030.0 66 217640.5 67 209251.0 68 172358.5 69 135466.0 70 117084.0 71 98702.0 72 82304.0 73 65906.0 74 58803.0 75 51700.0 76 43321.5 77 34943.0 78 32167.0 79 29391.0 80 21967.0 81 14543.0 82 9460.5 83 4378.0 84 3035.5 85 1693.0 86 1097.5 87 502.0 88 319.5 89 109.0 90 81.0 91 43.5 92 6.0 93 7.5 94 9.0 95 8.0 96 7.0 97 4.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2319218.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.011703086648797 #Duplication Level Percentage of deduplicated Percentage of total 1 68.46976046514888 5.485593912607371 2 10.250904173348289 1.6425440121311106 3 4.450384046580482 1.0696546680828423 4 2.3028760324115276 0.7379983606816387 5 1.3286621650389356 0.5322423384377957 6 0.8023677649510573 0.38569993794515295 7 0.5481700097897158 0.30742427516083964 8 0.4114280591289494 0.26369915610058625 9 0.3099375737234817 0.22348150344619716 >10 4.600482728064446 10.046085725497441 >50 3.3920471762413813 19.78282193600085 >100 2.961920967523764 41.273123655020726 >500 0.11279966856859701 6.099248675010209 >1k 0.05392072068938428 7.7226628729927045 >5k 0.0024791135949142197 1.440336931573935 >10k+ 0.0018593351961856649 2.987382039310602 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTCCCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 33168 1.4301372272895434 No Hit GTCCCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 15206 0.6556520344357452 No Hit GTCCCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 11789 0.5083178899094436 No Hit GTCCCGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 8570 0.3695211058210138 No Hit GTCCCGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 7714 0.3326121132209219 No Hit GTCCCGGGGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACTGACTGCTCT 7388 0.31855565108584016 No Hit GTCCCGGGGAGCTTTGGCACGTCCAGAGTTCTTTGTCATTACCTTTATGTTA 5335 0.23003443402043275 No Hit GTCCCGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 4831 0.20830297108766835 No Hit GTCCCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 4433 0.19114201424790597 No Hit GTCCCGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 4316 0.18609721035279997 No Hit GTCCCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 4249 0.18320830555816658 No Hit GTCCCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 4212 0.18161294022381683 No Hit GTCCCGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 4133 0.17820661964507004 No Hit GTCCCGGGGGGGCTGATGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 3782 0.16307220795975197 No Hit GTCCCGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 3278 0.14134074502698754 No Hit GTCCCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 3241 0.13974537969263778 No Hit GTCCCGGGGGGAGCTGGAGAGATGGCTCAGTGGTTAAGAGCATCCTCTGCTC 3105 0.13388133413935213 No Hit GTCCCGGGGGGGTCCCTTCGCGTCGTGCAGGGACGGATTCGGGGTGGCGGTG 2586 0.11150310147644595 No Hit GTCCCGGGGTGTCCCTTCCCCAGCACTCCTGAACCATTCTCCTCCACCTCTG 2560 0.11038203394420015 No Hit GTCCCGGGGGGGGTTGGGGATTTAGCTCAGTGGTAAAGTGCTTGCCTAGCAA 2533 0.10921784842994492 No Hit GTCCCGGGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCT 2507 0.10809678089769914 No Hit GTCCCGGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTGTCCCGGGGAAG 2435 0.1049922861930185 No Hit GTCCCGGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTC 2411 0.10395745462479164 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 1.2935394602835957E-4 0.0 0.0 0.0 0.0 8 2.1558991004726592E-4 0.0 0.0 0.0 0.0 9 5.605337661228915E-4 0.0 0.0 0.0 0.0 10 0.004053090308888599 0.0 0.0 0.0 0.0 11 0.012331742854703611 0.0 0.0 0.0 0.0 12 0.01664354105564893 0.0 0.0 0.0 0.0 13 0.019187501994206668 0.0 0.0 0.0 0.0 14 0.03876306582649842 0.0 0.0 0.0 0.0 15 0.04561882496600147 0.0 0.0 0.0 0.0 16 0.05493230908004336 0.0 0.0 0.0 0.0 17 0.05907163535295087 0.0 0.0 0.0 0.0 18 0.062477955931697665 0.0 0.0 0.0 0.0 19 0.06967865892727634 0.0 0.0 0.0 0.0 20 0.07567205842659035 0.0 0.0 0.0 0.0 21 0.07998385662753565 0.0 0.0 0.0 0.0 22 0.08377823904436754 0.0 0.0 0.0 0.0 23 0.09011658239975716 0.0 0.0 0.0 0.0 24 0.09636868979112787 0.0 0.0 0.0 0.0 25 0.09994748229791249 0.0 0.0 0.0 0.0 26 0.10607023574325485 0.0 0.0 0.0 0.0 27 0.11253793304467281 0.0 0.0 0.0 0.0 28 0.14168568888306318 0.0 0.0 0.0 0.0 29 0.14789467829242442 0.0 0.0 0.0 0.0 30 0.15901911765086335 0.0 0.0 0.0 0.0 31 0.16565928688031914 0.0 0.0 0.0 0.0 32 0.17225633812776547 0.0 0.0 0.0 0.0 33 0.17764608587894712 0.0 0.0 0.0 0.0 34 0.1852348507126109 0.0 0.0 0.0 0.0 35 0.2205915959603625 0.0 0.0 0.0 0.0 36 0.23020690594847057 0.0 0.0 0.0 0.0 37 0.23779567078213432 0.0 0.0 0.0 0.0 38 0.244996373777713 0.0 0.0 0.0 0.0 39 0.25094665529501753 0.0 0.0 0.0 0.0 40 0.2564226390102181 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCATGCG 20 6.312789E-4 46.000004 36 TAAGACG 20 6.312789E-4 46.000004 41 ATCGTAC 30 1.8622286E-6 46.0 25 GTCCCGG 236010 0.0 44.852974 1 TCCCGGG 234600 0.0 44.8049 2 CCGGGGG 125485 0.0 44.755466 4 CCCGGGG 226540 0.0 44.733955 3 CGGGGGG 58575 0.0 44.60606 5 CGGGGGA 30940 0.0 44.505817 5 CCGGGGA 70020 0.0 44.209797 4 CGGGGAG 27045 0.0 44.120537 5 CGGGGGC 18535 0.0 44.026978 5 CGGGGGT 18530 0.0 43.72855 5 CGGGGAT 17195 0.0 43.311428 5 CCGGGGT 13360 0.0 43.159428 4 CCGGGGC 19705 0.0 42.91855 4 ATTCGTA 285 0.0 42.771927 35 CGGGGAC 11195 0.0 42.65118 5 CGGGGAA 16055 0.0 42.36126 5 CGTAAGG 125 0.0 42.32 19 >>END_MODULE