##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527147_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1412839 Sequences flagged as poor quality 0 Sequence length 50 %GC 58 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.111187474298205 31.0 31.0 34.0 31.0 34.0 2 32.62249414122911 34.0 31.0 34.0 31.0 34.0 3 32.8491859298901 34.0 31.0 34.0 31.0 34.0 4 36.40401418703759 37.0 37.0 37.0 35.0 37.0 5 36.37143581115753 37.0 37.0 37.0 35.0 37.0 6 35.24275448228708 37.0 35.0 37.0 32.0 37.0 7 36.255426839151525 37.0 35.0 37.0 35.0 37.0 8 36.52412766068887 37.0 37.0 37.0 35.0 37.0 9 38.66600865349838 39.0 39.0 39.0 38.0 39.0 10 37.84629529620856 39.0 38.0 39.0 35.0 39.0 11 37.29093973198645 39.0 37.0 39.0 34.0 39.0 12 36.595665889743984 38.0 35.0 39.0 33.0 39.0 13 36.42596644062062 38.0 35.0 39.0 33.0 39.0 14 37.03827400008069 39.0 36.0 40.0 33.0 40.0 15 36.989967717482315 39.0 35.0 40.0 33.0 40.0 16 36.86303251821333 39.0 35.0 40.0 32.0 40.0 17 36.63781577377182 38.0 35.0 40.0 30.0 40.0 18 36.51662432874517 38.0 35.0 40.0 30.0 40.0 19 36.46483923504377 38.0 35.0 40.0 30.0 40.0 20 36.129716832561954 38.0 34.0 40.0 30.0 40.0 21 36.35718648763235 38.0 35.0 40.0 30.0 40.0 22 36.26971650697638 38.0 35.0 40.0 30.0 40.0 23 36.301626016835606 38.0 35.0 40.0 31.0 40.0 24 36.32484805416612 38.0 35.0 40.0 31.0 40.0 25 36.202076811299804 38.0 35.0 40.0 31.0 40.0 26 35.97202158207694 38.0 34.0 40.0 30.0 40.0 27 35.780792432824974 38.0 34.0 40.0 30.0 40.0 28 35.546315609917336 38.0 34.0 40.0 29.0 40.0 29 36.11663112357459 38.0 35.0 40.0 30.0 40.0 30 36.27477936268747 38.0 35.0 40.0 31.0 40.0 31 36.26693133470976 38.0 35.0 40.0 31.0 40.0 32 35.55037481269982 38.0 34.0 40.0 29.0 40.0 33 35.68207700948233 38.0 34.0 40.0 29.0 40.0 34 35.44857835889298 38.0 34.0 40.0 27.0 40.0 35 35.43288371852702 38.0 34.0 40.0 28.0 40.0 36 35.377149838021175 38.0 34.0 40.0 28.0 40.0 37 35.38155161345348 37.0 34.0 40.0 29.0 40.0 38 35.21372782036736 37.0 34.0 40.0 28.0 40.0 39 35.168339067650315 37.0 34.0 40.0 28.0 40.0 40 35.00103691928096 37.0 34.0 40.0 28.0 40.0 41 34.8423507561725 36.0 34.0 40.0 28.0 40.0 42 34.71381240183772 36.0 33.0 40.0 27.0 40.0 43 34.61681975087041 36.0 33.0 40.0 27.0 40.0 44 34.454561347754414 35.0 33.0 39.0 27.0 40.0 45 34.304949820892546 35.0 33.0 39.0 26.0 40.0 46 33.949883178479645 35.0 33.0 39.0 25.0 40.0 47 33.83304396325413 35.0 33.0 39.0 24.0 40.0 48 33.70692343572056 35.0 33.0 39.0 24.0 40.0 49 33.40895317867075 35.0 33.0 39.0 24.0 40.0 50 32.93275171480968 35.0 31.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 4.0 14 8.0 15 22.0 16 89.0 17 239.0 18 607.0 19 1220.0 20 2136.0 21 2831.0 22 3670.0 23 5059.0 24 6709.0 25 9151.0 26 11972.0 27 15805.0 28 20560.0 29 26691.0 30 33950.0 31 44280.0 32 60601.0 33 88414.0 34 148239.0 35 127040.0 36 176115.0 37 241365.0 38 335030.0 39 51030.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 100.0 0.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 99.38697898345104 0.5177518457517098 0.0288780250262061 0.06639114577103265 8 99.37530037038898 0.5255375877930889 0.04437872963586085 0.05478331218206745 9 98.23858203234764 1.0783252727310046 0.2683957620082685 0.414696932913092 10 59.9514877491349 28.50650357188611 4.728564259621939 6.813444419357054 11 37.62750037336172 21.840846692369055 22.67753084392489 17.854122090344333 12 33.902589042346655 14.119513971514094 26.197747938724795 25.780149047414465 13 26.152378296465486 14.60923714591684 29.973478931428136 29.264905626189535 14 25.049492546567585 16.835747031331948 33.09152706005426 25.023233362046206 15 28.121038561364742 18.213681813709844 29.09397319864471 24.5713064262807 16 35.7458280809066 19.212946414984298 23.76866720128762 21.27255830282148 17 34.243179866920435 18.416889680989836 23.99275501313313 23.347175438956597 18 32.895326360611506 19.95917439991393 23.86188376736486 23.2836154721097 19 31.934141115866705 23.270096592746945 21.641602475582854 23.1541598158035 20 31.355377364299823 23.63623880711107 22.90664399836075 22.101739830228357 21 32.625585788614266 21.350486502708378 24.661762592906904 21.362165115770445 22 30.21844668783917 19.4265588648105 27.41600422978131 22.93899021756902 23 32.14471004834946 19.48919869850705 26.20298561973445 22.163105633409046 24 32.584038237902554 19.94784968421738 23.139933141709708 24.328178936170364 25 29.71216111673021 21.80113940795802 21.893152722992497 26.593546752319263 26 27.668049933502687 20.064989712203584 24.970714993003448 27.296245361290282 27 25.941667805036527 19.40865165811533 26.01365052918273 28.63603000766542 28 25.7502093302917 22.313936690592488 22.688714000675237 29.247139978440572 29 30.56434597289571 22.07548064570698 22.719503071475238 24.64067030992208 30 29.896187746799175 19.535700812336014 25.018986593659996 25.549124847204812 31 31.504509714128787 20.286812580909785 23.73108330106969 24.47759440389174 32 35.031167740981104 20.384629812738748 23.096120647858672 21.488081798421476 33 35.051623008708 20.036040907704276 23.881489681414514 21.03084640217321 34 29.117896660553676 22.16076991079663 27.955343814829575 20.765989613820114 35 26.92734274747512 26.28600994168479 27.307853194879243 19.47879411596084 36 27.32215064844614 28.660448925886108 22.360226466002143 21.65717395966561 37 29.225339900724713 26.97547278918546 21.04811659361045 22.751070716479372 38 30.56696481340054 27.53710790826131 20.18793365698427 21.707993621353882 39 31.58732169765982 24.165810824871055 20.64531061217874 23.601556865290384 40 29.069766618843335 23.34328256793591 21.25465109612631 26.332299717094447 41 25.631299815477917 24.43760400158829 22.748593434920753 27.182502748013043 42 24.4110616991745 23.046362678266952 22.207130465679388 30.335445156879164 43 25.13704675479655 20.51528872008771 24.790156557116557 29.557507967999186 44 26.814449487875123 20.72741480097874 23.966778946504167 28.491356764641974 45 28.21821877793577 20.842360665298735 24.010025204570372 26.92939535219512 46 26.854793787544086 24.406036356584153 23.886231906112446 24.852937949759315 47 25.794446500981355 23.36225146672763 24.153707534970366 26.689594497320645 48 27.087870592473735 21.21600550381183 26.123429491966178 25.57269441174826 49 28.40748308901439 20.37585315807392 25.507648075966195 25.709015676945494 50 27.242736079624073 21.046063988890452 25.015589178951036 26.69561075253444 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 1.5 8 3.0 9 10.0 10 17.0 11 34.5 12 52.0 13 126.0 14 200.0 15 761.5 16 1323.0 17 2728.0 18 4133.0 19 3610.0 20 3087.0 21 3052.0 22 3017.0 23 3545.0 24 4073.0 25 3898.5 26 3724.0 27 5062.0 28 6400.0 29 6888.5 30 7377.0 31 7791.5 32 8206.0 33 10688.5 34 13171.0 35 15823.0 36 18475.0 37 19989.5 38 21504.0 39 22306.5 40 23109.0 41 25016.0 42 26923.0 43 31044.5 44 35166.0 45 35294.0 46 35422.0 47 40834.0 48 46246.0 49 44088.0 50 41930.0 51 48617.0 52 55304.0 53 61710.5 54 68117.0 55 68100.5 56 68084.0 57 79145.0 58 90206.0 59 104911.5 60 119617.0 61 127404.5 62 135192.0 63 140243.0 64 145294.0 65 145756.0 66 146218.0 67 116503.0 68 86788.0 69 73035.5 70 59283.0 71 50259.5 72 41236.0 73 38407.5 74 35579.0 75 29105.0 76 22631.0 77 21606.5 78 20582.0 79 14853.0 80 9124.0 81 6223.0 82 3322.0 83 2492.0 84 1662.0 85 1132.0 86 602.0 87 456.0 88 310.0 89 200.0 90 90.0 91 62.0 92 34.0 93 18.5 94 3.0 95 3.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1412839.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.620297969140129 #Duplication Level Percentage of deduplicated Percentage of total 1 68.60799080442314 5.914213237981534 2 11.02069489833605 1.9000334770127847 3 4.736213321060487 1.2248271021885644 4 2.5561267815411917 0.8813829801513693 5 1.3395318319050689 0.5773581765084911 6 0.9110670179519658 0.47122014987611305 7 0.5711744217444508 0.3446585595451935 8 0.4084593305536422 0.2816832910118318 9 0.32964756291875147 0.2557494195444456 >10 3.6744228753367594 8.155703223868144 >50 2.7515799967783043 17.584746491550472 >100 2.910047954707945 45.18206227750349 >500 0.13558755758685825 7.868469301990172 >1k 0.044913378450646795 6.8520471257636135 >5k 8.47422234917864E-4 0.45532265519765247 >10k+ 0.001694844469835728 2.0505225303061296 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TGCGGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 15578 1.1026026320054867 No Hit TGCGGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 12492 0.8841771780082515 No Hit TGCGGAGGGGTTTGGGTGAGTTCCCTTCTGTGTCTATGTGTGTGTTAGAG 6233 0.44116845585378095 No Hit TGCGGAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 4233 0.2996095096468883 No Hit TGCGGAGGGAAGTTATGACCTGGTACGTCTGAGCTGCACAGTGATTGCTG 4130 0.2923192239172333 No Hit TGCGGAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 3748 0.2652814651917168 No Hit TGCGGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTG 3587 0.2538859700220619 No Hit TGCGGAGGGGGGCTGGTGAGATGGCTCAGCAGGTAAGAGCACCCGACTGC 3445 0.2438352848413726 No Hit TGCGGAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 3340 0.23640344016551074 No Hit TGCGGAGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC 3032 0.21460336244964925 No Hit TGCGGAGGGATGGTAACAAACCTGACAAGTTCAGACCCCAGTATATTATT 2879 0.20377410306482197 No Hit TGCGGAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 2707 0.19160003369102918 No Hit TGCGGAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 2591 0.18338961481102942 No Hit TGCGGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCGGACTGC 2464 0.17440062172689175 No Hit TGCGGAGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 2336 0.1653408491696506 No Hit TGCGGAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 2273 0.1608817423641335 No Hit TGCGGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 2027 0.1434699919806857 No Hit TGCGGAGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGA 2019 0.14290375619585813 No Hit TGCGGAGGGAGATGGGGTCAAGATAGTAATAGAAAAGGGGGCTGCAAAAA 1812 0.12825240526344472 No Hit TGCGGAGGGCTGCTCTGTGGGGTTTGTCATTTTGTTAGGCCCTTGCCTGT 1742 0.1232978421462035 No Hit TGCGGAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 1722 0.12188225268413458 No Hit TGCGGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGC 1715 0.12138679637241044 No Hit TGCGGAGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCC 1609 0.11388417222344513 No Hit TGCGGAGGGGAGTTGCTTCAGTGTCCTGGTGCGGAGCGTCACGTCTCGTG 1564 0.11069909593379006 No Hit TGCGGAGGGAACCTTTGATGACTCTGTATTTCGTTTTTGAGACTGTATTC 1531 0.10836337332137633 No Hit TGCGGAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGGCT 1490 0.10546141492413501 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.007007167837241186 0.0 0.0 0.0 0.0 7 0.007148726783448078 0.0 0.0 0.0 0.0 8 0.007219506256551525 0.0 0.0 0.0 0.0 9 0.0072902857296549715 0.0 0.0 0.0 0.0 10 0.01387277672827548 0.0 0.0 0.0 0.0 11 0.020313708780689096 0.0 0.0 0.0 0.0 12 0.02576372820965446 0.0 0.0 0.0 0.0 13 0.03022283501517158 0.0 0.0 0.0 0.0 14 0.04260924280827469 0.0 0.0 0.0 0.0 15 0.048696277495171074 0.0 0.0 0.0 0.0 16 0.057048255321377736 0.0 0.0 0.0 0.0 17 0.06271061316965344 0.0 0.0 0.0 0.0 18 0.06808985312551537 0.0 0.0 0.0 0.0 19 0.07913145092965299 0.0 0.0 0.0 0.0 20 0.0854308240358597 0.0 0.0 0.0 0.0 21 0.09059772557241129 0.0 0.0 0.0 0.0 22 0.0942782581737905 0.0 0.0 0.0 0.0 23 0.10078996969930756 0.0 0.0 0.0 0.0 24 0.10708934280551428 0.0 0.0 0.0 0.0 25 0.11190234697654863 0.0 0.0 0.0 0.0 26 0.11756470482482434 0.0 0.0 0.0 0.0 27 0.12202381163034146 0.0 0.0 0.0 0.0 28 0.12881864104827231 2.1233841931033896E-4 0.0 0.0 0.0 29 0.13285307101516874 2.1233841931033896E-4 0.0 0.0 0.0 30 0.13894010570206514 2.1233841931033896E-4 0.0 0.0 0.0 31 0.14502714038896153 2.1233841931033896E-4 0.0 0.0 0.0 32 0.1520343082262027 2.1233841931033896E-4 0.0 0.0 0.0 33 0.1578382250206853 2.1233841931033896E-4 0.0 0.0 0.0 34 0.16413759812689202 2.1233841931033896E-4 0.0 0.0 0.0 35 0.17319737068413316 2.1233841931033896E-4 0.0 0.0 0.0 36 0.18515910163861557 2.1233841931033896E-4 0.0 0.0 0.0 37 0.19513900734620152 2.1233841931033896E-4 0.0 0.0 0.0 38 0.20193383676413237 2.1233841931033896E-4 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCATA 20 7.857094E-4 44.000004 10 CGAACGC 20 7.857094E-4 44.000004 27 GTCGATA 20 7.857094E-4 44.000004 44 TTTACGG 20 7.857094E-4 44.000004 13 CGAAAAC 20 7.857094E-4 44.000004 13 CAACGAA 20 7.857094E-4 44.000004 19 CGCATTA 20 7.857094E-4 44.000004 19 CCAATCG 30 2.5281297E-6 44.000004 28 CGTCTTA 40 8.314601E-9 44.000004 16 TTCGTAC 20 7.857094E-4 44.000004 19 CGACACG 20 7.857094E-4 44.000004 38 CGTTATG 20 7.857094E-4 44.000004 24 GTAATCG 20 7.857094E-4 44.000004 44 TTATACG 30 2.5281297E-6 44.000004 41 CGTTAAC 20 7.857094E-4 44.000004 25 AAACGTA 30 2.5281297E-6 44.000004 35 GTTACGT 65 0.0 44.000004 44 ACGATAT 20 7.857094E-4 44.000004 26 TACGCGA 20 7.857094E-4 44.000004 14 CGCTATC 20 7.857094E-4 44.000004 33 >>END_MODULE