##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527145_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1519094 Sequences flagged as poor quality 0 Sequence length 52 %GC 58 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.16878152372401 33.0 31.0 34.0 31.0 34.0 2 32.608240174735734 34.0 31.0 34.0 31.0 34.0 3 32.832049892896684 34.0 31.0 34.0 31.0 34.0 4 36.37913848649261 37.0 37.0 37.0 35.0 37.0 5 36.362131638990085 37.0 37.0 37.0 35.0 37.0 6 35.144709938950456 37.0 35.0 37.0 32.0 37.0 7 36.26860088974086 37.0 35.0 37.0 35.0 37.0 8 36.56918531703766 37.0 37.0 37.0 35.0 37.0 9 38.6002321120352 39.0 39.0 39.0 38.0 39.0 10 37.910538123381436 39.0 38.0 39.0 35.0 39.0 11 37.43692556221011 39.0 37.0 39.0 35.0 39.0 12 36.878727715335586 39.0 35.0 39.0 34.0 39.0 13 36.74105684045885 39.0 35.0 39.0 33.0 39.0 14 37.393744560902746 40.0 36.0 40.0 33.0 40.0 15 37.51404784694035 40.0 36.0 40.0 33.0 40.0 16 37.60797620160438 40.0 36.0 40.0 33.0 40.0 17 37.4495238609329 40.0 36.0 40.0 33.0 40.0 18 37.24575306070592 40.0 36.0 40.0 32.0 40.0 19 37.333111710006094 40.0 36.0 40.0 32.0 40.0 20 37.30022961054418 39.0 35.0 40.0 33.0 40.0 21 33.09490327787484 38.0 33.0 40.0 10.0 40.0 22 33.676351825495985 38.0 33.0 40.0 16.0 40.0 23 35.59860416801067 38.0 33.0 40.0 28.0 40.0 24 36.450405307374 38.0 35.0 40.0 31.0 40.0 25 36.73075662203919 38.0 35.0 40.0 31.0 40.0 26 36.76984044437013 39.0 35.0 40.0 32.0 40.0 27 36.700160095425296 39.0 35.0 40.0 32.0 40.0 28 36.60561690059996 38.0 35.0 40.0 31.0 40.0 29 36.545936591152355 38.0 35.0 40.0 31.0 40.0 30 36.42598680529316 38.0 35.0 40.0 31.0 40.0 31 36.2404143522389 38.0 35.0 40.0 31.0 40.0 32 36.16526034596937 38.0 35.0 40.0 31.0 40.0 33 35.779280939823344 38.0 35.0 40.0 30.0 40.0 34 35.46098003151879 38.0 34.0 40.0 28.0 40.0 35 35.35620837156884 38.0 34.0 40.0 28.0 40.0 36 35.331808959814204 37.0 34.0 40.0 29.0 40.0 37 35.312374349447765 37.0 34.0 40.0 29.0 40.0 38 35.23265380549196 37.0 34.0 40.0 29.0 40.0 39 35.052938132860774 36.0 34.0 40.0 29.0 40.0 40 30.337219421576282 35.0 28.0 39.0 8.0 40.0 41 31.05237332251987 35.0 28.0 39.0 12.0 40.0 42 32.69060308315351 35.0 30.0 39.0 22.0 40.0 43 33.574888716563954 35.0 32.0 38.0 26.0 40.0 44 34.457529290484985 35.0 33.0 39.0 27.0 40.0 45 34.75744884780007 35.0 33.0 39.0 28.0 40.0 46 34.7834551383917 35.0 34.0 39.0 29.0 40.0 47 34.73448910995633 35.0 34.0 39.0 29.0 40.0 48 34.57580636879614 35.0 34.0 39.0 28.0 40.0 49 34.44500274505725 35.0 34.0 39.0 28.0 40.0 50 34.350644528909996 35.0 34.0 39.0 28.0 40.0 51 34.134685542830134 35.0 33.0 38.0 27.0 40.0 52 33.7419909498688 35.0 33.0 37.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 1.0 13 1.0 14 5.0 15 19.0 16 55.0 17 136.0 18 321.0 19 680.0 20 1371.0 21 2314.0 22 3728.0 23 5586.0 24 7595.0 25 10421.0 26 13711.0 27 17976.0 28 22417.0 29 29130.0 30 37735.0 31 52123.0 32 72275.0 33 90220.0 34 167400.0 35 177591.0 36 196239.0 37 217547.0 38 313309.0 39 79186.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 100.0 0.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 99.40220947485804 0.5176111550700615 0.02712142895699674 0.05305794111490138 8 99.41037223502957 0.4924645874448849 0.044566037388074735 0.05259714013747668 9 98.23335488126476 1.0556950392799918 0.2976774314163574 0.4132726480388969 10 60.83343097925474 27.6741926437732 4.767051940169601 6.725324436802463 11 37.66870252927074 21.56561740089817 21.919380894138214 18.84629917569288 12 33.65538933074583 14.02941490125035 26.881417476469526 25.4337782915343 13 26.319701084988818 14.501999217954914 30.343678534705553 28.834621162350714 14 26.236954395185553 16.381869719714516 32.53070580227425 24.850470082825684 15 27.65589226209833 17.964589419746243 28.946003341465378 25.433514976690052 16 36.32184710096939 18.878028614424124 23.594194960943828 21.205929323662655 17 34.961825930455916 18.078933890858632 23.649096105968425 23.310144072717026 18 32.596271198490676 20.829323267684554 23.65245337023252 22.921952163592245 19 32.8002743740677 22.949205249971364 21.271297233745905 22.97922314221503 20 32.00631428996494 23.420933793432138 22.726111748186746 21.846640168416172 21 37.36957686621105 20.23706235427169 23.106865012961674 19.286495766555593 22 30.78920725116418 19.329811058433513 27.154474969949195 22.726506720453113 23 32.32821668705162 19.322833215061085 25.8415213278441 22.507428770043198 24 32.72621707412445 19.766123755343646 23.191125763119334 24.316533407412578 25 29.743978976942838 21.643756080927183 21.83057796291737 26.78168697921261 26 27.607376502046616 19.961042568794294 25.044335636899362 27.387245292259728 27 26.065207288028258 19.25489798524647 25.908995756681286 28.770898970043984 28 26.054082235859006 22.33015205115681 22.477213391666346 29.13855232131784 29 30.63839367412418 21.968949913566902 22.633819895279686 24.758836517029227 30 30.018089729799474 19.396561371449035 24.947304116795934 25.63804478195556 31 31.733651768751635 20.156422183222368 23.61242951390763 24.497496534118362 32 35.11303447976228 19.99968402218691 23.093304298483176 21.79397719956764 33 35.43256704325078 20.044184230863923 23.647845360458273 20.875403365427026 34 29.177786233109998 21.976586044049938 27.86187029900717 20.98375742383289 35 27.198909349915144 26.03170047409838 27.10253611692232 19.666854059064153 36 27.471176898862087 28.432210251636832 22.493538912009395 21.60307393749169 37 29.326559120107117 26.834876577749633 20.96493041246954 22.873633889673712 38 30.48323540215418 27.386060375460637 20.30644581572964 21.82425840665555 39 31.538601297878866 24.15531889402499 20.536517160886685 23.769562647209455 40 29.294829681375873 27.597304709254335 19.584239026683008 23.523626582686784 41 25.770163005054332 24.415605617558885 22.507560427465318 27.306670949921468 42 24.44529436624725 22.87811024202584 22.18993689659758 30.486658495129333 43 25.376178169356205 20.339294342548914 24.73329497713769 29.55123251095719 44 26.832243429307205 20.648228483556647 23.927354067621884 28.59217401951426 45 28.29989454240488 20.692136233834113 23.937820832680533 27.070148391080473 46 26.5907178884256 24.397107749750838 23.884367919299265 25.127806442524292 47 25.9519819050039 23.285458306069277 24.232996773076586 26.52956301585024 48 27.144929806845397 21.32685666588111 26.017349815087147 25.510863712186342 49 28.360786100136004 20.308552334483583 25.542066521229103 25.788595044151318 50 27.083643276847912 21.226467881513585 25.08830921588789 26.60157962575061 51 23.669700492530417 21.641847048306424 27.325366303862697 27.363086155300465 52 24.962642206473067 21.78739432846157 26.161185548754716 27.08877791631064 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 1.0 8 2.0 9 8.5 10 15.0 11 42.0 12 69.0 13 131.5 14 699.0 15 1204.0 16 2533.0 17 3862.0 18 3526.5 19 3191.0 20 3129.0 21 3067.0 22 3462.0 23 3857.0 24 3836.0 25 3815.0 26 4148.5 27 4482.0 28 5749.0 29 7016.0 30 7644.5 31 8273.0 32 9501.0 33 10729.0 34 11254.0 35 11779.0 36 16416.0 37 21053.0 38 21265.0 39 22573.0 40 23669.0 41 25559.5 42 27450.0 43 32677.0 44 37904.0 45 37392.5 46 36881.0 47 40529.0 48 44177.0 49 44616.5 50 45056.0 51 51994.0 52 58932.0 53 64364.5 54 69797.0 55 72849.5 56 75902.0 57 85537.0 58 95172.0 59 108823.5 60 122475.0 61 132585.5 62 142696.0 63 145949.5 64 151255.0 65 153307.0 66 125122.0 67 96937.0 68 84692.0 69 72447.0 70 61018.5 71 49590.0 72 45253.5 73 40917.0 74 34438.5 75 27960.0 76 26060.0 77 24160.0 78 18360.0 79 12560.0 80 8759.5 81 4959.0 82 3387.5 83 1816.0 84 1306.0 85 796.0 86 487.5 87 179.0 88 109.5 89 28.5 90 17.0 91 12.0 92 7.0 93 4.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1519094.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.915859878546398 #Duplication Level Percentage of deduplicated Percentage of total 1 72.5673644485076 7.195678176268107 2 9.241595443304208 1.832767309400348 3 3.878258155481953 1.1536879332776653 4 2.109065036048934 0.8365277348881053 5 1.239365731519835 0.6144688466011418 6 0.8444611521491717 0.5024135074552222 7 0.5312033549276317 0.36871366241333015 8 0.3793285651241842 0.3009095119761178 9 0.310946854839903 0.27749748980404665 >10 3.744725909446696 9.547490002191804 >50 2.5678301088653384 18.69542332383192 >100 2.4416541924308905 43.02389326944199 >500 0.10289345566380562 6.781193474168506 >1k 0.039054450324948115 6.66024967911876 >5k 0.0015020942432672352 1.1538812564659862 >10k+ 7.510471216336176E-4 1.0552048226969508 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TGCGGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 14169 0.9327270070186572 No Hit TGCGGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 9808 0.6456479980830679 No Hit TGCGGAGGGGTTTGGGTGAGTTCCCTTCTGTGTCTATGTGTGTGTTAGAGTG 5686 0.37430205109097925 No Hit TGCGGAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 4181 0.27522984094466835 No Hit TGCGGAGGGAAGTTATGACCTGGTACGTCTGAGCTGCACAGTGATTGCTGCA 3920 0.258048547357833 No Hit TGCGGAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 3634 0.23922153599448093 No Hit TGCGGAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 3424 0.22539750667173986 No Hit TGCGGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 3367 0.22164527014128158 No Hit TGCGGAGGGGGGCTGGTGAGATGGCTCAGCAGGTAAGAGCACCCGACTGCTC 3123 0.2055830646424777 No Hit TGCGGAGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 2790 0.183662103859274 No Hit TGCGGAGGGATGGTAACAAACCTGACAAGTTCAGACCCCAGTATATTATTTG 2737 0.18017318217305842 No Hit TGCGGAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 2551 0.16792904191577349 No Hit TGCGGAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 2503 0.16476926378486123 No Hit TGCGGAGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 2224 0.14640305339893384 No Hit TGCGGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 2194 0.1444281920671137 No Hit TGCGGAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 2055 0.1352780012296803 No Hit TGCGGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCGGACTGCTC 1993 0.13119662114391867 No Hit TGCGGAGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 1938 0.12757604203558173 No Hit TGCGGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 1786 0.11757007795435964 No Hit TGCGGAGGGAGATGGGGTCAAGATAGTAATAGAAAAGGGGGCTGCAAAAAGA 1697 0.11171132266995987 No Hit TGCGGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCTC 1691 0.11131635040359583 No Hit TGCGGAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 1664 0.10953897520495769 No Hit TGCGGAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 1639 0.1078932574284409 No Hit TGCGGAGGGCTGCTCTGTGGGGTTTGTCATTTTGTTAGGCCCTTGCCTGTCT 1582 0.1041410208979826 No Hit TGCGGAGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCAT 1576 0.1037460486316186 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.008689389860008664 0.0 0.0 0.0 0.0 7 0.008821047282130007 0.0 0.0 0.0 0.0 8 0.008886875993190678 0.0 0.0 0.0 0.0 9 0.009084362126372694 0.0 0.0 0.0 0.0 10 0.013955686744862398 0.0 0.0 0.0 0.0 11 0.02099935882835427 0.0 0.0 0.0 0.0 12 0.026660627979572034 0.0 0.0 0.0 0.0 13 0.030083720954726962 0.0 0.0 0.0 0.0 14 0.039168083081099654 0.0 0.0 0.0 0.0 15 0.046540898719894884 0.0 0.0 0.0 0.0 16 0.054177029202932804 0.0 0.0 0.0 0.0 17 0.05924583995460452 0.0 0.0 0.0 0.0 18 0.06319556261824483 0.0 0.0 0.0 0.0 19 0.07366232767689163 0.0 0.0 0.0 0.0 20 0.08103514331568686 0.0 0.0 0.0 0.0 21 0.08847378766554276 0.0 0.0 0.0 0.0 22 0.09262099646236507 0.0 0.0 0.0 0.0 23 0.09768980721403679 0.0 0.0 0.0 0.0 24 0.10637919707404545 0.0 0.0 0.0 0.0 25 0.11190880880314187 0.0 0.0 0.0 0.0 26 0.1188208234645124 0.0 0.0 0.0 0.0 27 0.12421877777148747 0.0 0.0 0.0 0.0 28 0.13119662114391867 0.0 0.0 0.0 0.0 29 0.1352780012296803 0.0 0.0 0.0 0.0 30 0.14192670104680816 0.0 0.0 0.0 0.0 31 0.1469955117984799 0.0 0.0 0.0 0.0 32 0.1535125541934864 0.0 0.0 0.0 0.0 33 0.15891050850046146 0.0 0.0 0.0 0.0 34 0.1648350924959219 0.0 0.0 0.0 0.0 35 0.1729978526674452 0.0 0.0 0.0 0.0 36 0.1828063306154853 0.0 0.0 0.0 0.0 37 0.19050828980958387 0.0 0.0 0.0 0.0 38 0.19847356384792514 0.0 0.0 0.0 0.0 39 0.2069654675747518 0.0 0.0 0.0 0.0 40 0.21499657032415373 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGT 55 1.8189894E-12 46.000004 37 GATACAC 30 1.8618011E-6 46.0 9 CGTATAG 25 3.4176785E-5 46.0 34 ATTACGA 30 1.8618011E-6 46.0 41 ATTCGAC 20 6.3120987E-4 46.0 44 CTACGAC 20 6.3120987E-4 46.0 33 TACGACA 20 6.3120987E-4 46.0 34 CGCTAAT 20 6.3120987E-4 46.0 37 TTACGCG 45 3.110472E-10 46.0 16 CCGAATT 45 3.110472E-10 46.0 25 GCGTATA 20 6.3120987E-4 46.0 40 TACGTCA 30 1.8618011E-6 46.0 31 ATCGAAC 65 0.0 46.0 41 ATATACG 35 1.0198528E-7 45.999996 32 GTACGTC 520 0.0 45.115387 23 AGGGATT 5615 0.0 43.992874 6 AGGGATC 4680 0.0 43.886753 6 TGCGGAG 159940 0.0 43.401463 1 CGGAGGG 156870 0.0 43.27143 3 GCGGAGG 159580 0.0 43.239944 2 >>END_MODULE