##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527142_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1810163 Sequences flagged as poor quality 0 Sequence length 52 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.58718910948903 34.0 31.0 34.0 31.0 34.0 2 32.808752029513364 34.0 31.0 34.0 31.0 34.0 3 32.77437225266454 34.0 31.0 34.0 31.0 34.0 4 36.39298726136818 37.0 37.0 37.0 35.0 37.0 5 36.3577064606889 37.0 37.0 37.0 35.0 37.0 6 36.30332075067273 37.0 37.0 37.0 35.0 37.0 7 36.57418144111884 37.0 37.0 37.0 35.0 37.0 8 36.66693496663008 37.0 37.0 37.0 35.0 37.0 9 38.66110841951802 39.0 39.0 39.0 39.0 39.0 10 38.15870062530281 39.0 39.0 39.0 37.0 39.0 11 37.781203681657395 39.0 38.0 39.0 35.0 39.0 12 37.41214520460312 39.0 37.0 39.0 35.0 39.0 13 37.25979041666413 39.0 37.0 39.0 35.0 39.0 14 38.063772157534984 40.0 38.0 40.0 34.0 40.0 15 38.171399481704135 40.0 38.0 40.0 34.0 40.0 16 38.285128466331486 40.0 38.0 40.0 35.0 40.0 17 38.25623769793107 40.0 38.0 40.0 35.0 40.0 18 38.25304848237424 40.0 38.0 40.0 35.0 40.0 19 38.21334874262705 40.0 38.0 40.0 34.0 40.0 20 38.16902897694848 40.0 38.0 40.0 34.0 40.0 21 33.89055626482256 40.0 34.0 40.0 10.0 40.0 22 34.68280812280441 40.0 34.0 40.0 17.0 40.0 23 36.69714440080811 40.0 34.0 40.0 30.0 40.0 24 37.451489727720656 40.0 37.0 40.0 33.0 40.0 25 37.74267897421392 40.0 37.0 40.0 34.0 40.0 26 37.8180821285155 40.0 37.0 40.0 34.0 40.0 27 37.76904124103741 40.0 37.0 40.0 34.0 40.0 28 37.66059465363064 40.0 37.0 40.0 33.0 40.0 29 37.66851438240645 40.0 37.0 40.0 34.0 40.0 30 37.5274254307485 40.0 37.0 40.0 33.0 40.0 31 37.38774298226182 40.0 36.0 40.0 33.0 40.0 32 37.36770224559888 40.0 36.0 40.0 33.0 40.0 33 37.040459892285945 39.0 35.0 40.0 32.0 40.0 34 36.947752218999064 39.0 35.0 40.0 32.0 40.0 35 36.80668867941727 39.0 35.0 40.0 31.0 40.0 36 36.719568900701205 39.0 35.0 40.0 31.0 40.0 37 36.5756387684424 39.0 35.0 40.0 31.0 40.0 38 36.46759324988965 39.0 35.0 40.0 31.0 40.0 39 36.255349932575136 38.0 35.0 40.0 31.0 40.0 40 31.328380924811743 37.0 30.0 40.0 8.0 40.0 41 32.22622327381567 36.0 30.0 40.0 13.0 40.0 42 33.99301333636805 36.0 31.0 40.0 23.0 40.0 43 34.83978459398408 37.0 33.0 40.0 27.0 40.0 44 35.55174699736985 37.0 34.0 40.0 30.0 40.0 45 35.77370711919313 38.0 35.0 40.0 30.0 40.0 46 35.80526836533505 37.0 35.0 40.0 31.0 40.0 47 35.700705958524175 37.0 35.0 40.0 30.0 40.0 48 35.50631241495932 37.0 35.0 40.0 30.0 40.0 49 35.33906891257859 36.0 35.0 40.0 30.0 40.0 50 35.19886275434864 36.0 34.0 40.0 29.0 40.0 51 35.032806990309716 36.0 34.0 40.0 29.0 40.0 52 34.61643288477336 35.0 34.0 39.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 1.0 14 2.0 15 17.0 16 48.0 17 96.0 18 242.0 19 442.0 20 788.0 21 1313.0 22 2134.0 23 3352.0 24 4953.0 25 7258.0 26 10206.0 27 13824.0 28 18820.0 29 24614.0 30 32650.0 31 44578.0 32 62636.0 33 78677.0 34 135765.0 35 181505.0 36 234524.0 37 261229.0 38 447527.0 39 242959.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 100.0 0.0 0.0 7 99.6849454993832 0.28809560244022225 0.02099258464569213 0.005966313530880921 8 99.26851891238525 0.6657963951312672 0.031157415105711475 0.034527277377783105 9 98.0211726789245 1.2525391359783622 0.34123998778010595 0.38504819731703716 10 62.85964302662247 26.12980157035582 3.9382088795318433 7.072346523489874 11 34.50716869143828 25.4385378554307 19.812359439453793 20.24193401367722 12 29.884159603306443 17.260821263057526 29.02108815614947 23.83393097748656 13 24.74826852609406 16.88312047036648 31.23735265829652 27.13125834524294 14 25.75022249377542 16.873508076344507 31.132776440574688 26.243492989305384 15 24.26908515973423 18.43027395875399 30.63519694082798 26.665443940683797 16 29.997077611242744 17.67299408948255 27.511776563768013 24.818151735506692 17 31.397835443548455 18.431047369767253 23.70874888062567 26.462368306058625 18 29.31769127973558 19.620940213671364 24.291569322762648 26.769799183830408 19 30.171758012952427 19.006465163634434 23.559259580490817 27.262517242922325 20 29.246592710159252 20.448324266930655 24.100813020705868 26.204270002204222 21 36.20646317486326 18.12234588818797 23.848073350300496 21.823117586648273 22 31.81265996487609 18.420053884650166 24.71108955381366 25.05619659666008 23 29.43027782580906 20.996396457114635 24.23527604972591 25.338049667350397 24 29.219026131900826 20.454124849530125 24.06683817976613 26.260010838802916 25 28.80917353851559 19.59320790448153 23.861221337525958 27.73639721947692 26 29.36492459518839 19.800095350529208 22.82772324923225 28.00725680505015 27 28.73293731006545 18.37033460522616 23.743828594441496 29.152899490266897 28 29.916035185781613 19.40609768291585 22.528634161674944 28.149232969627597 29 30.172365693034276 20.504009859885546 22.21993268009566 27.10369176698452 30 30.106018076825126 20.31027040106333 23.152003438364392 26.431708083747154 31 30.789381950686206 21.489225003494163 22.23120238343177 25.490190662387864 32 32.8722330530455 21.21455360649842 21.96128193980321 23.95193140065287 33 33.4814047132772 19.76601002230186 22.3730128170778 24.37957244734314 34 29.366250442639696 23.279174306402243 24.864114447151998 22.490460803806066 35 29.703623375353487 23.920387280040526 25.150939445784715 21.225049898821265 36 31.6465423279561 22.476152700060712 21.652083265429688 24.225221706553498 37 30.106404782331758 25.307113226819904 20.984850535559506 23.60163145528883 38 31.993859116554695 23.897019218711243 21.18151790750336 22.927603757230703 39 31.454183960229 22.56990116359687 20.35010106824634 25.625813807927795 40 30.21473756783229 28.156911836116414 20.0357094913552 21.5926411046961 41 28.511355054765787 22.39511027459958 23.330606138784187 25.76292853185045 42 27.077782498040232 21.55557261970331 22.609787074423686 28.756857807832777 43 26.602410943102917 21.462210861673782 25.13320623612349 26.80217195909982 44 26.840234829681087 20.641179827452003 24.40426635612373 28.114318986743182 45 26.940115337679536 21.06395943348748 23.944528752383075 28.051396476449913 46 26.445905700204897 22.747398991140578 23.69996514126076 27.106730167393767 47 27.505534032018108 21.66699904925689 24.923390876954173 25.904076041770825 48 28.39777412310383 22.22391022244958 23.667537122347547 25.71077853209904 49 27.429518778143187 22.34655111169547 25.71635814012329 24.507571970038057 50 26.15123610415195 23.02013686060316 24.79754585636763 26.031081178877262 51 26.189906654815065 23.507606773533656 23.258126478112747 27.04436009353854 52 27.20959383215766 22.835788821227702 24.328803538686845 25.625813807927795 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 20.5 4 41.0 5 23.5 6 6.0 7 19.0 8 32.0 9 476.5 10 921.0 11 1275.0 12 1629.0 13 2593.0 14 3336.5 15 3116.0 16 4129.0 17 5142.0 18 5472.0 19 5802.0 20 4872.0 21 3942.0 22 5014.0 23 6086.0 24 6460.5 25 6835.0 26 7683.5 27 8532.0 28 11505.5 29 14479.0 30 14906.5 31 15334.0 32 18738.0 33 22142.0 34 24553.0 35 26964.0 36 26697.5 37 26431.0 38 30378.0 39 33470.5 40 32616.0 41 37491.0 42 42366.0 43 47199.5 44 52033.0 45 51819.5 46 51606.0 47 58678.0 48 65750.0 49 66742.5 50 67735.0 51 80598.0 52 93461.0 53 101742.5 54 110024.0 55 133070.0 56 156116.0 57 168717.0 58 181318.0 59 168431.5 60 155545.0 61 152060.0 62 148575.0 63 135732.5 64 116237.5 65 109585.0 66 92522.0 67 75459.0 68 62994.0 69 50529.0 70 46747.5 71 42966.0 72 39643.5 73 36321.0 74 28001.0 75 19681.0 76 13426.5 77 7172.0 78 4704.0 79 2236.0 80 1410.0 81 584.0 82 406.0 83 228.0 84 129.0 85 30.0 86 19.0 87 8.0 88 6.0 89 4.0 90 4.0 91 4.5 92 5.0 93 2.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1810163.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.009938975272252 #Duplication Level Percentage of deduplicated Percentage of total 1 70.67613947330935 7.074638431356569 2 9.72846124228928 1.9476260671723393 3 4.30074374276416 1.2915054724005968 4 2.272085866866904 0.9097376349566508 5 1.3429179908394753 0.6721263568549184 6 0.8629234071839003 0.5182686387746911 7 0.5850694291791603 0.40995564976665355 8 0.3922072027993063 0.31407761325466277 9 0.3154213860376451 0.2841613943159356 >10 4.316426823880422 11.418882162979152 >50 2.850989976875779 20.650092985981374 >100 2.2240539509635178 39.21109994083029 >500 0.08901338876588798 6.037580423880709 >1k 0.040344197785978 6.959560306844137 >5k 0.002561536367363683 1.5430647113047071 >10k+ 6.403840918409207E-4 0.7576222093266174 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TGATCAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 11819 0.6529246261248296 No Hit TGATCAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 7235 0.39968776292521724 No Hit TGATCAGGGGGTTCTTCACTTTACCTACCGTATGCTAAGGCCCGCCCCTCAC 5747 0.31748522094419124 No Hit TGATCAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 5702 0.3149992569729908 No Hit TGATCAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 5388 0.2976527528183926 No Hit TGATCAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 4953 0.2736217677634556 No Hit TGATCAGGGGGGGGCTGGTGAGATGGCTCAGCGGTTAGGAGCGCCGACTGCT 3774 0.2084895117180055 No Hit TGATCAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 3202 0.1768901474618584 No Hit TGATCAGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 2928 0.16175338905943829 No Hit TGATCAGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 2889 0.1595988869510646 No Hit TGATCAGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 2878 0.15899120686921564 No Hit TGATCAGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 2526 0.1395454442500482 No Hit TGATCAGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTGATCAGGGAAG 2455 0.13562314553993204 No Hit TGATCAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 2365 0.1306512175975313 No Hit TGATCAGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 2302 0.12717086803785074 No Hit TGATCAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 2285 0.12623172609317504 No Hit TGATCAGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 2102 0.11612213927696013 No Hit TGATCAGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTG 2066 0.11413336809999984 No Hit TGATCAGGGGACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCATCCTTGCA 2060 0.11380190623717311 No Hit TGATCAGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 2034 0.11236557149825735 No Hit TGATCAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 1997 0.11032155667749259 No Hit TGATCAGGGGGAGCTGCCTTCCAAAACACTTACTTCACAGCGTTAATCAGAG 1978 0.10927192744520797 No Hit TGATCAGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCA 1968 0.10871949100716345 No Hit TGATCAGGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAACG 1919 0.10601255246074524 No Hit TGATCAGGGATGTTGATTTCAGAAGAGACTAGCTTTGTGGAATATAGATGCT 1889 0.10435524314661167 No Hit TGATCAGGGGCTCTTGAGTCACCCCCGCGCAGCCTAGGCTTGCCGTGCGAGT 1854 0.1024217156134558 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.030439247736253585 0.0 0.0 0.0 0.0 7 0.03110217146190702 0.0 0.0 0.0 0.0 8 0.03126790239332038 0.0 0.0 0.0 0.0 9 0.031709851543756 0.0 0.0 0.0 0.0 10 0.04065932184007739 0.0 0.0 0.0 0.0 11 0.054746451010212895 0.0 0.0 0.0 0.0 12 0.06253580478664077 0.0 0.0 0.0 0.0 13 0.06839163102991277 0.0 0.0 0.0 0.0 14 0.08286546570667945 0.0 0.0 0.0 0.0 15 0.0958477220007259 0.0 0.0 0.0 0.0 16 0.11153691684119055 0.0 0.0 0.0 0.0 17 0.12125979815077427 0.0 0.0 0.0 0.0 18 0.12960158836524666 0.0 0.0 0.0 0.0 19 0.13949020060624376 0.0 0.0 0.0 0.0 20 0.1476662598893028 0.0 0.0 0.0 0.0 21 0.15617378103518853 0.0 0.0 0.0 0.0 22 0.16606239327618563 0.0 0.0 0.0 0.0 23 0.17567478729816044 0.0 0.0 0.0 0.0 24 0.18777314529133565 0.0 0.0 0.0 0.0 25 0.19523103720493679 0.0 0.0 0.0 0.0 26 0.2053406240211517 0.0 0.0 0.0 0.0 27 0.216720814644869 0.0 0.0 0.0 0.0 28 0.2313051366092446 0.0 0.0 0.0 0.0 29 0.23959168317991253 1.1048728760890594E-4 0.0 0.0 0.0 30 0.2493698081333007 1.1048728760890594E-4 0.0 0.0 0.0 31 0.2580430602105998 1.1048728760890594E-4 0.0 0.0 0.0 32 0.2721301893807353 1.1048728760890594E-4 0.0 0.0 0.0 33 0.28218453255314574 1.1048728760890594E-4 0.0 0.0 0.0 34 0.29268082487599184 1.1048728760890594E-4 0.0 0.0 0.0 35 0.3120161002075504 1.1048728760890594E-4 0.0 0.0 0.0 36 0.3241144582007256 1.1048728760890594E-4 0.0 0.0 0.0 37 0.3354946488244429 1.1048728760890594E-4 0.0 0.0 0.0 38 0.3465986212291379 1.1048728760890594E-4 0.0 0.0 0.0 39 0.3585864919347042 1.1048728760890594E-4 0.0 0.0 0.0 40 0.3739994685561466 1.1048728760890594E-4 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATTG 95 0.0 46.0 45 CGTATAG 50 1.6370905E-11 46.0 21 ATAATCC 20 6.3124206E-4 46.0 10 ACCGATA 30 1.8620012E-6 46.0 11 CGACAAT 20 6.3124206E-4 46.0 28 CCCCGTA 25 3.4179397E-5 46.0 34 TCGTACC 20 6.3124206E-4 46.0 14 TTTATCG 50 1.6370905E-11 46.0 45 CGACTAA 25 3.4179397E-5 46.0 37 TCGGTTA 20 6.3124206E-4 46.0 35 TAATGCG 30 1.8620012E-6 46.0 41 TACGTTT 45 3.110472E-10 45.999996 46 TACCGTA 655 0.0 45.297707 26 CGTTAAT 295 0.0 45.22034 41 ATTCGTA 105 0.0 43.809525 46 TAGCGTA 100 0.0 43.7 42 CAGGGAT 14535 0.0 43.420708 5 TGATCAG 191245 0.0 43.40469 1 GATCAGG 190030 0.0 43.382046 2 TCAGGGG 117940 0.0 43.34195 4 >>END_MODULE