##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527138_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1671144 Sequences flagged as poor quality 0 Sequence length 50 %GC 58 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.33728511726099 33.0 31.0 34.0 31.0 34.0 2 32.580003279190784 34.0 31.0 34.0 31.0 34.0 3 32.96556550482783 34.0 31.0 34.0 31.0 34.0 4 36.4117490772788 37.0 37.0 37.0 35.0 37.0 5 35.842843584993275 37.0 35.0 37.0 35.0 37.0 6 36.18519888172413 37.0 37.0 37.0 35.0 37.0 7 36.60220842728095 37.0 37.0 37.0 35.0 37.0 8 36.654188388313635 37.0 37.0 37.0 35.0 37.0 9 38.6460245197302 39.0 39.0 39.0 38.0 39.0 10 38.09007063424816 39.0 39.0 39.0 37.0 39.0 11 37.009319364459316 39.0 35.0 39.0 34.0 39.0 12 36.748057019622486 39.0 35.0 39.0 33.0 39.0 13 36.68417922094086 39.0 35.0 39.0 33.0 39.0 14 37.46544163758479 40.0 35.0 40.0 33.0 40.0 15 37.51281098457105 40.0 35.0 40.0 33.0 40.0 16 37.343795029034005 40.0 35.0 40.0 33.0 40.0 17 37.37151077345818 40.0 35.0 40.0 33.0 40.0 18 37.35478510529314 40.0 35.0 40.0 33.0 40.0 19 37.21188539108539 40.0 35.0 40.0 33.0 40.0 20 37.04358810491496 40.0 35.0 40.0 32.0 40.0 21 37.224992579933264 40.0 35.0 40.0 33.0 40.0 22 37.02078755630873 39.0 35.0 40.0 32.0 40.0 23 37.079774693264014 39.0 35.0 40.0 33.0 40.0 24 37.13849195521152 39.0 35.0 40.0 33.0 40.0 25 37.05391037516815 39.0 35.0 40.0 33.0 40.0 26 36.90129037354052 39.0 35.0 40.0 32.0 40.0 27 36.815051246331855 39.0 35.0 40.0 32.0 40.0 28 36.574685365234835 39.0 35.0 40.0 31.0 40.0 29 36.85532126495383 39.0 35.0 40.0 32.0 40.0 30 36.88569447037479 39.0 35.0 40.0 32.0 40.0 31 36.83725639442203 39.0 35.0 40.0 32.0 40.0 32 36.09364064377456 39.0 35.0 40.0 30.0 40.0 33 36.30753483841009 39.0 35.0 40.0 31.0 40.0 34 36.16129310221022 39.0 35.0 40.0 30.0 40.0 35 36.219261176774715 39.0 35.0 40.0 31.0 40.0 36 36.05725239716027 38.0 35.0 40.0 30.0 40.0 37 35.962804521932284 38.0 35.0 40.0 30.0 40.0 38 35.78410657609398 38.0 35.0 40.0 30.0 40.0 39 35.729174146572646 38.0 35.0 40.0 30.0 40.0 40 35.572050044759756 38.0 35.0 40.0 30.0 40.0 41 35.441603476420944 37.0 35.0 40.0 29.0 40.0 42 35.299729406921244 37.0 35.0 40.0 29.0 40.0 43 35.160703685618955 37.0 34.0 40.0 28.0 40.0 44 35.03810922338231 36.0 34.0 40.0 28.0 40.0 45 34.97535400899025 36.0 34.0 40.0 28.0 40.0 46 34.646214808538346 36.0 34.0 40.0 26.0 40.0 47 34.55635839879747 35.0 34.0 40.0 26.0 40.0 48 34.40730601312634 35.0 34.0 40.0 26.0 40.0 49 34.105076522430146 35.0 33.0 39.0 25.0 40.0 50 33.69736120884855 35.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 4.0 14 5.0 15 28.0 16 81.0 17 177.0 18 424.0 19 801.0 20 1362.0 21 2116.0 22 3226.0 23 4939.0 24 6717.0 25 9335.0 26 12793.0 27 16557.0 28 21544.0 29 27871.0 30 35495.0 31 43329.0 32 54147.0 33 78327.0 34 166238.0 35 153252.0 36 135324.0 37 229223.0 38 445284.0 39 222544.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 0.0 0.0 100.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 100.0 0.0 5 0.0 100.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 99.25159052720771 0.6429128788422781 0.08251832277769001 0.02297827117232267 8 99.12808231965647 0.6792353022839444 0.1287740613615583 0.06390831669802242 9 95.4586199633305 2.295433547318484 1.378277395604448 0.8676690937465592 10 56.18217221256816 29.420026042040664 6.105637814574926 8.292163930816256 11 33.74640366120454 22.00247255772094 21.776639236355454 22.47448454471907 12 30.568341208178353 14.710820850866233 29.806467904621027 24.91437003633439 13 25.869165074942675 14.670848233306048 29.16122129511281 30.298765396638473 14 22.903113077029865 17.887327483448466 32.94982359389736 26.259735845624316 15 26.293904056143575 16.88490040355589 30.321264953828038 26.499930586472498 16 29.886413139741396 18.065050049546898 28.836593375555907 23.211943435155796 17 31.694456013365695 20.451319575093468 22.831545336607736 25.0226790749331 18 32.67151125217217 18.370469570545687 24.258352362214147 24.699666815068003 19 29.889405102133626 20.79982335454036 23.87849281689669 25.43227872642932 20 30.781907483735694 22.039931926871652 23.544470135428185 23.63369045396447 21 31.737181236326734 18.66475899144538 27.200887535724032 22.397172236503856 22 29.533780452193227 19.131385446137497 25.83601413163677 25.498819970032503 23 29.125018550166832 20.606901619489403 25.124944349499508 25.143135480844258 24 29.77134226613625 20.385795598703645 24.306044242746285 25.536817892413822 25 28.9173763601461 20.13794143413135 23.022612054975514 27.922070150747036 26 27.603785191461654 19.80930428496886 24.690990124130536 27.895920399438946 27 25.842476770403987 18.466212367097032 24.931543900465787 30.75976696203319 28 26.78063649811147 23.071859755951614 23.116978548826435 27.03052519711048 29 31.523973996256455 21.400011010421604 21.532435265901682 25.54357972742026 30 28.964709205191173 21.14371951190322 23.547581776316104 26.343989506589498 31 31.164280277462623 20.712517891935107 23.254010426390543 24.869191404211726 32 32.43574461566448 20.42798226843408 23.488221242454273 23.64805187344717 33 33.69099251770045 19.348302719574136 23.152223865806896 23.808480896918518 34 28.12474568319666 20.910466123805012 25.832483616013942 25.13230457698439 35 26.7444337531655 25.337672875587025 26.360205942755382 21.5576874284921 36 29.523847137051025 24.813720421459788 23.032904405604786 22.629528035884398 37 29.93865280310973 24.959249472217834 22.620671827203402 22.48142589746904 38 30.410545111612166 23.799923884476744 23.090290244287743 22.699240759623347 39 30.437412933894386 21.874177210342136 21.99283843881796 25.69557141694552 40 28.119659347129872 22.34732614304931 22.662200265207545 26.87081424461327 41 25.74069020982034 24.22759498882203 22.903472112516933 27.128242688840697 42 24.794871058388747 23.102916325582953 23.640272771227373 28.461939844800927 43 26.45912021944249 20.90502075225115 24.418482189446273 28.217376838860087 44 25.640339791184964 21.217261947504223 25.094186976107384 28.04821128520343 45 26.68423546983384 21.461585596453688 24.78972488307411 27.064454050638364 46 27.890115992398023 22.816944560133656 23.209968739976926 26.08297070749139 47 27.307580914630936 21.490248596171245 25.096161671286254 26.106008817911565 48 27.7985619431958 20.729512238322968 25.742126351768608 25.72979946671262 49 27.838115686021077 22.688529534259168 24.448102617129344 25.025252162590416 50 24.333689975250486 22.737238682004662 25.444964646972373 27.484106695772475 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.5 8 1.0 9 4.0 10 7.0 11 65.0 12 123.0 13 499.5 14 876.0 15 1969.0 16 3062.0 17 3850.5 18 4639.0 19 4760.0 20 4881.0 21 5028.5 22 5176.0 23 5649.0 24 6122.0 25 6408.0 26 6694.0 27 6394.5 28 6095.0 29 7799.0 30 9503.0 31 11044.5 32 12586.0 33 11511.0 34 10436.0 35 12315.5 36 14195.0 37 16988.5 38 19782.0 39 21602.5 40 23423.0 41 26784.0 42 30145.0 43 35646.5 44 41148.0 45 39369.0 46 37590.0 47 42441.5 48 47293.0 49 52068.0 50 56843.0 51 60403.5 52 63964.0 53 72408.5 54 80853.0 55 87819.0 56 94785.0 57 106880.0 58 118975.0 59 136298.0 60 153621.0 61 157267.0 62 160913.0 63 163556.5 64 166200.0 65 157951.5 66 149703.0 67 132185.0 68 114667.0 69 94062.0 70 73457.0 71 62256.5 72 51056.0 73 45990.5 74 40925.0 75 32451.5 76 23978.0 77 22400.0 78 20822.0 79 16599.0 80 12376.0 81 7523.5 82 2671.0 83 1867.0 84 1063.0 85 724.0 86 385.0 87 228.0 88 71.0 89 52.0 90 33.0 91 18.5 92 4.0 93 3.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1671144.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.570924130036657 #Duplication Level Percentage of deduplicated Percentage of total 1 67.45402176428486 5.78143302807527 2 10.791318329715043 1.849831413341231 3 4.715594419370361 1.2125100598934289 4 2.533242880736055 0.8684893013497692 5 1.4795946568247853 0.634074677342643 6 0.8922036103657818 0.45882056717939423 7 0.6326254609595539 0.3795529380029662 8 0.4661432640762609 0.31962228401002196 9 0.31602479212107387 0.24377620648322978 >10 4.512530504040204 10.380673521212751 >50 3.2020021110136723 19.908529190535518 >100 2.8270518865543632 42.156859692907545 >500 0.12522609438252652 6.971292488650503 >1k 0.05096410817893521 7.608035943578488 >5k 7.28058688270503E-4 0.47300229207704125 >10k+ 7.28058688270503E-4 0.7534963953601943 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCCTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 12075 0.7225589177234277 No Hit GCCTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 7580 0.4535814986619945 No Hit GCCTAGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCT 4166 0.24929030652056317 No Hit GCCTAGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 4120 0.246537701119712 No Hit GCCTAGGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTGCCTAGGGGA 4096 0.24510155917144183 No Hit GCCTAGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 4044 0.24198991828352315 No Hit GCCTAGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 3296 0.1972301608957696 No Hit GCCTAGGGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAA 3105 0.18580086455745284 No Hit GCCTAGGGGGGGGCTGGAGAGATGGCTCAGGGGTTAAGAGCACTGACTGC 3102 0.1856213468139191 No Hit GCCTAGGGAGCCCTCCCTACTCTCTTGAATACCATCAATAAAGTTCGCTG 3044 0.18215067043893285 No Hit GCCTAGGGGAGCCCAACTCTGTCTCCCAGGCCCCCTGCTGGGAAACCCAT 3033 0.18149243871264237 No Hit GCCTAGGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCC 2825 0.16904587516096756 No Hit GCCTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTG 2682 0.16048886271919116 No Hit GCCTAGGGGATCTCTAACCATGCCTACTAACCAGAGCTGAACTAAGGCTG 2350 0.1406222324347872 No Hit GCCTAGGGGGCTCTTTCCTTTTGCGGCCATCGGTGGATCGCAGCCGCCAA 2342 0.14014351845203046 No Hit GCCTAGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 2266 0.1355957356158416 No Hit GCCTAGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 2170 0.12985116782276093 No Hit GCCTAGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 2113 0.1264403306956193 No Hit GCCTAGGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 2095 0.12536322423441665 No Hit GCCTAGGGGAAATTAAAGGAGCATCCCATCTTCTTCATGTTCATTCAGAT 2091 0.1251238672430383 No Hit GCCTAGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAA 1967 0.1177038005103091 No Hit GCCTAGGGGGCTCTTTTTCGTGACGCCTCCCAGGCGCTCGGCTGTGTCAA 1801 0.10777048536810713 No Hit GCCTAGGGGGCTCAGCCCGTAGCCCGTCGGTTCCGGAGTAAGTTCCAGGT 1801 0.10777048536810713 No Hit GCCTAGGGTGATAGTCTTTCTGAAGTGGGCTTTCATCAGGCTCAGAGCCC 1790 0.10711225364181663 No Hit GCCTAGGGGGCTCTTCCGGTCTCTTTGGCCTCGCCGGTAGAAGCAAGATG 1788 0.10699257514612745 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.023696342146457754 0.0 0.0 0.0 0.0 6 0.023696342146457754 0.0 0.0 0.0 0.0 7 0.023756181394302345 0.0 0.0 0.0 0.0 8 0.024055377633525298 0.0 0.0 0.0 0.0 9 0.02668830453868727 0.0 0.0 0.0 0.0 10 0.04224650897828074 0.0 0.0 0.0 0.0 11 0.05696696394804996 0.0 0.0 0.0 0.0 12 0.06313040647604276 0.0 0.0 0.0 0.0 13 0.06977256298679228 0.0 0.0 0.0 0.0 14 0.10286366704485071 0.0 0.0 0.0 0.0 15 0.11273714293920811 0.0 0.0 0.0 0.0 16 0.128235508130957 0.0 0.0 0.0 0.0 17 0.14080175017832097 0.0 0.0 0.0 0.0 18 0.1515728147903472 0.0 0.0 0.0 0.0 19 0.16216436165883968 0.0 0.0 0.0 0.0 20 0.1707812133484607 0.0 0.0 0.0 0.0 21 0.18155227796048695 0.0 0.0 0.0 0.0 22 0.19088720062424303 0.0 0.0 0.0 0.0 23 0.2004614802793775 0.0 0.0 0.0 0.0 24 0.2133269185659644 0.0 0.0 0.0 0.0 25 0.22056746755515982 0.0 0.0 0.0 0.0 26 0.22852608751849032 0.0 0.0 0.0 0.0 27 0.23839956341284774 0.0 0.0 0.0 0.0 28 0.2794492874342367 0.0 0.0 0.0 0.0 29 0.2873480681497226 0.0 0.0 0.0 0.0 30 0.30476128927249835 0.0 0.0 0.0 0.0 31 0.3143355689276328 0.0 0.0 0.0 0.0 32 0.3229524206172538 0.0 0.0 0.0 0.0 33 0.32923554164093577 0.0 0.0 0.0 0.0 34 0.33880982129607023 0.0 0.0 0.0 0.0 35 0.39350289382602577 0.0 0.0 0.0 0.0 36 0.4112751504358691 0.0 0.0 0.0 0.0 37 0.42150766181729404 0.0 0.0 0.0 0.0 38 0.429107246293557 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTGA 30 2.5284098E-6 44.000004 11 CGCATTC 30 2.5284098E-6 44.000004 34 TACGACA 30 2.5284098E-6 44.000004 37 CGAATAG 30 2.5284098E-6 44.000004 10 ACCGTCA 30 2.5284098E-6 44.000004 9 TATACGC 30 2.5284098E-6 44.000004 19 AACGTAT 20 7.8575086E-4 44.0 36 GATACGG 25 4.4437107E-5 44.0 9 ACACGTG 25 4.4437107E-5 44.0 40 TTAATCG 25 4.4437107E-5 44.0 32 AATCACG 25 4.4437107E-5 44.0 25 CATGCGA 25 4.4437107E-5 44.0 23 ACGTTAC 25 4.4437107E-5 44.0 31 TAAACGA 40 8.3164196E-9 44.0 34 CGCGATT 20 7.8575086E-4 44.0 33 ATAGACG 25 4.4437107E-5 44.0 10 TAACGCT 20 7.8575086E-4 44.0 18 TAACGCG 20 7.8575086E-4 44.0 10 ATCACGT 25 4.4437107E-5 44.0 40 TCGATAC 50 2.7284841E-11 44.0 25 >>END_MODULE