##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527137_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1797491 Sequences flagged as poor quality 0 Sequence length 52 %GC 58 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.359230171388894 33.0 31.0 34.0 31.0 34.0 2 32.554843390036446 34.0 31.0 34.0 31.0 34.0 3 33.008894064003655 34.0 31.0 34.0 31.0 34.0 4 36.38760027171207 37.0 37.0 37.0 35.0 37.0 5 35.97674870138432 37.0 35.0 37.0 35.0 37.0 6 36.24771361859392 37.0 37.0 37.0 35.0 37.0 7 36.60903392562188 37.0 37.0 37.0 35.0 37.0 8 36.61960087700022 37.0 37.0 37.0 35.0 37.0 9 38.61027843811179 39.0 39.0 39.0 38.0 39.0 10 37.97766108425578 39.0 38.0 39.0 35.0 39.0 11 36.92158792450143 39.0 35.0 39.0 34.0 39.0 12 36.6872384896503 39.0 35.0 39.0 33.0 39.0 13 36.67983038579887 39.0 35.0 39.0 33.0 39.0 14 37.47230389470656 40.0 35.0 40.0 33.0 40.0 15 37.42203104215821 40.0 35.0 40.0 33.0 40.0 16 32.40126376154317 38.0 33.0 40.0 3.0 40.0 17 33.96180731920215 38.0 33.0 40.0 17.0 40.0 18 35.95908407886326 39.0 34.0 40.0 30.0 40.0 19 36.78698140908633 39.0 35.0 40.0 31.0 40.0 20 37.13633392322966 39.0 35.0 40.0 33.0 40.0 21 37.35094083920309 40.0 35.0 40.0 33.0 40.0 22 37.37331480380152 40.0 35.0 40.0 33.0 40.0 23 37.33515049588566 40.0 35.0 40.0 33.0 40.0 24 37.31334009460965 40.0 35.0 40.0 33.0 40.0 25 37.24886188581751 40.0 35.0 40.0 33.0 40.0 26 37.10983309513094 39.0 35.0 40.0 33.0 40.0 27 37.0249252986524 39.0 35.0 40.0 33.0 40.0 28 36.88361666344922 39.0 35.0 40.0 32.0 40.0 29 36.702386270640574 39.0 35.0 40.0 32.0 40.0 30 36.64148860828789 39.0 35.0 40.0 32.0 40.0 31 36.559006415052984 39.0 35.0 40.0 31.0 40.0 32 36.418180675174455 38.0 35.0 40.0 31.0 40.0 33 36.11413742822634 38.0 35.0 40.0 31.0 40.0 34 35.90036556511271 38.0 35.0 40.0 30.0 40.0 35 35.88875104242525 38.0 35.0 40.0 30.0 40.0 36 35.87033926734543 38.0 35.0 40.0 30.0 40.0 37 35.50870240796755 38.0 34.0 40.0 29.0 40.0 38 35.538355407620955 37.0 34.0 40.0 30.0 40.0 39 35.142903636235175 37.0 34.0 40.0 28.0 40.0 40 35.062473191799015 37.0 34.0 40.0 28.0 40.0 41 35.01538755965955 37.0 34.0 40.0 28.0 40.0 42 34.91038953741632 36.0 34.0 40.0 28.0 40.0 43 34.77195880257537 36.0 34.0 40.0 27.0 40.0 44 35.070834847017316 36.0 34.0 40.0 29.0 40.0 45 35.182430955148035 36.0 34.0 40.0 29.0 40.0 46 35.07761707847216 36.0 34.0 40.0 29.0 40.0 47 34.768550162420844 35.0 34.0 40.0 28.0 40.0 48 34.68271440580231 35.0 34.0 40.0 28.0 40.0 49 34.606677307424626 35.0 34.0 40.0 28.0 40.0 50 34.09188530012111 35.0 34.0 39.0 26.0 40.0 51 34.176533290013694 35.0 34.0 39.0 26.0 40.0 52 33.814992119571116 35.0 33.0 39.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 10.0 15 26.0 16 62.0 17 189.0 18 402.0 19 809.0 20 1355.0 21 2234.0 22 3566.0 23 5473.0 24 7589.0 25 10543.0 26 14332.0 27 19144.0 28 24967.0 29 32317.0 30 40583.0 31 51294.0 32 70386.0 33 110106.0 34 177344.0 35 173116.0 36 185986.0 37 298285.0 38 385527.0 39 181846.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 0.0 0.0 100.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 100.0 0.0 5 0.0 100.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 99.25173477920056 0.6490157669774147 0.07844267370462495 0.02080678011739697 8 99.07298562273748 0.704537602691752 0.14954177795605098 0.07293499661472574 9 95.50195244371182 2.2783424228549682 1.3308550640865517 0.8888500693466614 10 56.43839106843929 29.200646901709103 5.982950679586156 8.378011350265453 11 33.76066973353413 22.068817034410742 21.712987714542102 22.457525517513023 12 30.729555808624355 14.638849373932889 29.68053803885527 24.951056778587485 13 25.8054699578468 14.67473272467011 29.115806421283892 30.4039908961992 14 22.88250678306595 17.89460976438825 32.80405854605114 26.418824906494663 15 26.5073928047484 16.925536762075584 30.152251110019467 26.414819323156557 16 28.237916073015107 26.148948729089604 25.502881516513852 20.110253681381437 17 31.837767198834378 20.404775322936246 22.777972184561705 24.979485293667675 18 32.83270959353899 18.301120840104346 24.230441209441384 24.63572835691528 19 29.939677027590122 20.729060674017283 23.937254762332607 25.394007536059988 20 30.630250721700413 22.17824734588379 23.402509386695122 23.788992545720674 21 31.79448464554204 18.624738593962363 27.205588233821477 22.375188526674126 22 29.267907321928178 19.059511285452892 25.83773715695934 25.83484423565959 23 29.18006265399938 20.673538838302946 25.00463145573469 25.141767051962987 24 29.77567064313535 20.4208532893906 24.218869524242404 25.584606543231647 25 28.863788469594564 20.03186664077873 22.926234401173637 28.178110488453072 26 27.61159861162031 19.74068298533901 24.714671728537166 27.933046674503515 27 25.858599570178654 18.264069194226842 24.900430655841948 30.976900579752552 28 26.889480948722415 23.142480268329578 22.96873809103912 26.99930069190889 29 31.791758623548045 21.315155402725246 21.413737259324247 25.479348714402466 30 28.93288478217693 21.112205846927743 23.45040948744667 26.504499883448652 31 31.28410656854471 20.66947762186292 23.263760430511198 24.782655379081177 32 32.49651875864747 20.103021378132073 23.646126739994806 23.754333123225653 33 34.06042088666925 19.193809593483362 23.03026830176062 23.715501218086764 34 28.195412383149627 20.82380384658393 25.7779315723973 25.20285219786914 35 26.80736649029119 25.365634654081713 26.399353320823305 21.42764553480379 36 29.623013411471877 24.793281301547545 22.97758375424411 22.606121532736463 37 30.045658086744243 24.98510423696141 22.497025019874926 22.472212656419423 38 30.287383914578708 23.904431232200885 23.0577510541082 22.75043379911221 39 30.7514196176782 21.820526500549935 21.8629745573135 25.565079324458367 40 28.09872205201584 22.374632195654943 22.610572180889918 26.916073571439302 41 25.85654114540768 24.1836537707282 22.862534499477327 27.09727058438679 42 24.754115597797153 22.97090778201393 23.626043190202342 28.648933429986577 43 26.514792007303512 20.816182111621142 24.259370422438835 28.40965545863651 44 25.523688296631246 21.111593882806645 25.250474133111094 28.114243687451008 45 26.65075930839153 21.504141049941282 24.786104631400104 27.05899501026709 46 27.918137003189447 22.782534098918994 23.085511971965367 26.213816925926192 47 27.626174484322867 21.472485814949838 25.103880909556707 25.79745879117058 48 28.019055450069015 20.78246845185873 25.70304941721544 25.495426680856813 49 27.971656047234728 22.51098892845639 24.46259814374592 25.054756880562962 50 24.357062149407145 22.838612265652515 25.366580416814326 27.437745168126014 51 25.522297469083295 23.093133706928157 24.94120971954797 26.443359104440578 52 26.400577249065506 23.231437598296736 24.797843215904834 25.570141936732927 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 4.0 10 8.0 11 68.5 12 129.0 13 506.5 14 1988.5 15 3093.0 16 3972.5 17 4852.0 18 4972.5 19 5093.0 20 5246.5 21 5400.0 22 5908.0 23 6416.0 24 6383.0 25 6350.0 26 6076.5 27 5803.0 28 7334.5 29 8866.0 30 9574.5 31 10283.0 32 10726.5 33 11170.0 34 11651.5 35 12133.0 36 14703.5 37 17274.0 38 18641.0 39 23929.5 40 27851.0 41 30286.0 42 32721.0 43 37485.5 44 42250.0 45 39724.5 46 37199.0 47 44454.5 48 51710.0 49 56073.5 50 60437.0 51 63581.0 52 66725.0 53 74568.0 54 82411.0 55 93168.5 56 103926.0 57 114018.0 58 124110.0 59 140588.5 60 157067.0 61 168348.0 62 179629.0 63 172147.5 64 160545.5 65 156425.0 66 139303.5 67 122182.0 68 105886.5 69 89591.0 70 73759.5 71 57928.0 72 51300.0 73 44672.0 74 37999.0 75 31326.0 76 28011.5 77 24697.0 78 19816.5 79 14936.0 80 9975.5 81 5015.0 82 3268.0 83 1521.0 84 1088.0 85 655.0 86 348.5 87 42.0 88 27.5 89 9.0 90 5.0 91 6.5 92 8.0 93 6.5 94 5.0 95 5.5 96 6.0 97 3.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1797491.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.248175698355423 #Duplication Level Percentage of deduplicated Percentage of total 1 71.69490070399007 7.347419390906361 2 9.842803618157191 2.0174156168656676 3 4.06705615449985 1.2503971813917667 4 2.07568712625165 0.8508802545856545 5 1.2124161482457327 0.6212526853372802 6 0.7892729272618128 0.4853164579520614 7 0.5297880924410919 0.38005530179630115 8 0.3510135280707193 0.28777986465346755 9 0.2748770285462563 0.2535289275585504 >10 3.93838368514074 10.914175176065987 >50 2.837096595494641 21.028342134650963 >100 2.2544562656371223 40.18003845798381 >500 0.09294797553401528 6.32075789510589 >1k 0.038052526896476056 6.862431203206669 >5k 6.238119163356731E-4 0.4608026914658824 >10k+ 6.238119163356731E-4 0.7394067604736952 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCCTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 11566 0.6434524567855973 No Hit GCCTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 7208 0.40100339862619616 No Hit GCCTAGGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTGCCTAGGGGAAG 4246 0.23621815074456565 No Hit GCCTAGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 4043 0.22492463105517635 No Hit GCCTAGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCT 3969 0.2208077815132315 No Hit GCCTAGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 3870 0.2153001044233323 No Hit GCCTAGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 3260 0.18136391225324633 No Hit GCCTAGGGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAACG 3037 0.1689577305254936 No Hit GCCTAGGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 2824 0.1571078798169226 No Hit GCCTAGGGAGCCCTCCCTACTCTCTTGAATACCATCAATAAAGTTCGCTGCA 2812 0.15644028259390452 No Hit GCCTAGGGGAGCCCAACTCTGTCTCCCAGGCCCCCTGCTGGGAAACCCATAC 2803 0.15593958467664096 No Hit GCCTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 2710 0.15076570619825078 No Hit GCCTAGGGGATCTCTAACCATGCCTACTAACCAGAGCTGAACTAAGGCTGCT 2436 0.13552223627267118 No Hit GCCTAGGGGGGGGCTGGAGAGATGGCTCAGGGGTTAAGAGCACTGACTGCTC 2318 0.1289575302463267 No Hit GCCTAGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 2198 0.12228155801614583 No Hit GCCTAGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 2136 0.11883230569721906 No Hit GCCTAGGGGGCTCTTTCCTTTTGCGGCCATCGGTGGATCGCAGCCGCCAAAA 2100 0.11682951402816483 No Hit GCCTAGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 2086 0.11605065060131038 No Hit GCCTAGGGGAAATTAAAGGAGCATCCCATCTTCTTCATGTTCATTCAGATTG 2084 0.11593938439747405 No Hit GCCTAGGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 1946 0.10826201633276607 No Hit GCCTAGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 1925 0.1070937211924844 No Hit GCCTAGGGGGCTCTTCCGGTCTCTTTGGCCTCGCCGGTAGAAGCAAGATGAC 1817 0.10108534618532164 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.021863809053842272 0.0 0.0 0.0 0.0 6 0.021863809053842272 0.0 0.0 0.0 0.0 7 0.021919442155760447 0.0 0.0 0.0 0.0 8 0.022141974563433142 0.0 0.0 0.0 0.0 9 0.024033500028651046 0.0 0.0 0.0 0.0 10 0.038164307915867175 0.0 0.0 0.0 0.0 11 0.04934656140142009 0.0 0.0 0.0 0.0 12 0.0541866412683012 0.0 0.0 0.0 0.0 13 0.05974995146011858 0.0 0.0 0.0 0.0 14 0.09090448853429586 0.0 0.0 0.0 0.0 15 0.09886002210859471 0.0 0.0 0.0 0.0 16 0.11465982305335604 0.0 0.0 0.0 0.0 17 0.1276223358002905 0.0 0.0 0.0 0.0 18 0.1371912293302164 0.0 0.0 0.0 0.0 19 0.14748335318507855 0.0 0.0 0.0 0.0 20 0.15721914602075893 0.0 0.0 0.0 0.0 21 0.16656550714301213 0.0 0.0 0.0 0.0 22 0.17502173863457451 0.0 0.0 0.0 0.0 23 0.18687158934314552 0.0 0.0 0.0 0.0 24 0.19916650486706192 0.0 0.0 0.0 0.0 25 0.20478544816079747 0.0 0.0 0.0 0.0 26 0.21290788104085084 0.0 0.0 0.0 0.0 27 0.22275494008036759 0.0 0.0 0.0 0.0 28 0.2648691982324251 0.0 0.0 0.0 0.0 29 0.27193460217603316 0.0 0.0 0.0 0.0 30 0.28656610798051285 0.0 0.0 0.0 0.0 31 0.29479980706440256 0.0 0.0 0.0 0.0 32 0.3042018012885739 0.0 0.0 0.0 0.0 33 0.31026580939765486 0.0 0.0 0.0 0.0 34 0.31922273880648083 0.0 0.0 0.0 0.0 35 0.3709058904884642 0.0 0.0 0.0 0.0 36 0.3906000085674977 0.0 0.0 0.0 0.0 37 0.40044706760701443 0.0 0.0 0.0 0.0 38 0.4087920328947405 0.0 0.0 0.0 0.0 39 0.4175264298958938 0.0 0.0 0.0 0.0 40 0.42475873314525636 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTCGTA 35 1.0199983E-7 46.000004 21 ATCCGAT 35 1.0199983E-7 46.000004 28 CAACGAC 25 3.417931E-5 46.0 38 ACCGATT 25 3.417931E-5 46.0 12 TTCGTAC 25 3.417931E-5 46.0 22 TAACGCG 45 3.110472E-10 46.0 10 TAACGAT 20 6.3124095E-4 46.0 35 TTATCGG 30 1.861994E-6 46.0 14 CTAACGC 40 5.6152203E-9 46.0 17 CCCGTAA 25 3.417931E-5 46.0 39 AAACCGG 20 6.3124095E-4 46.0 26 AACGATA 20 6.3124095E-4 46.0 17 TCCGTAT 25 3.417931E-5 46.0 40 ACGTCTA 25 3.417931E-5 46.0 34 ACGTCCC 20 6.3124095E-4 46.0 19 CGTCGAT 30 1.861994E-6 46.0 40 TTACGAC 30 1.861994E-6 46.0 12 CCGAACT 25 3.417931E-5 46.0 46 CGCGTAT 40 5.6152203E-9 46.0 39 TAATGCG 20 6.3124095E-4 46.0 19 >>END_MODULE