##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527134_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2233475 Sequences flagged as poor quality 0 Sequence length 52 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.431468003895276 33.0 31.0 34.0 31.0 34.0 2 32.894715185977006 34.0 31.0 34.0 31.0 34.0 3 32.90158788435062 34.0 31.0 34.0 31.0 34.0 4 36.239563012793965 37.0 37.0 37.0 35.0 37.0 5 36.29726278556957 37.0 37.0 37.0 35.0 37.0 6 36.29949562900861 37.0 37.0 37.0 35.0 37.0 7 36.50266871131309 37.0 37.0 37.0 35.0 37.0 8 36.62959200349231 37.0 37.0 37.0 35.0 37.0 9 38.72289548797278 39.0 39.0 39.0 39.0 39.0 10 38.12498460918524 39.0 39.0 39.0 37.0 39.0 11 37.863330012648454 39.0 38.0 39.0 35.0 39.0 12 37.628173586003875 39.0 37.0 39.0 35.0 39.0 13 37.538641354839434 39.0 37.0 39.0 35.0 39.0 14 38.437019890529335 40.0 38.0 40.0 35.0 40.0 15 38.324896405825 40.0 38.0 40.0 35.0 40.0 16 33.21966979706511 40.0 35.0 40.0 3.0 40.0 17 34.9939793371316 40.0 35.0 40.0 17.0 40.0 18 37.078783062268435 40.0 35.0 40.0 32.0 40.0 19 37.98224291742688 40.0 37.0 40.0 34.0 40.0 20 38.22569269859748 40.0 38.0 40.0 34.0 40.0 21 38.41800467880769 40.0 38.0 40.0 35.0 40.0 22 38.45582645876941 40.0 38.0 40.0 35.0 40.0 23 38.41766708828171 40.0 38.0 40.0 35.0 40.0 24 38.3763373218863 40.0 38.0 40.0 35.0 40.0 25 38.30641086199756 40.0 38.0 40.0 35.0 40.0 26 38.22653264531728 40.0 38.0 40.0 35.0 40.0 27 38.11502165907387 40.0 38.0 40.0 34.0 40.0 28 38.06186368775115 40.0 38.0 40.0 34.0 40.0 29 37.86942768555726 40.0 38.0 40.0 34.0 40.0 30 37.84575336639094 40.0 38.0 40.0 34.0 40.0 31 37.83718868579232 40.0 37.0 40.0 34.0 40.0 32 37.77911416066891 40.0 37.0 40.0 34.0 40.0 33 37.461712801799884 40.0 37.0 40.0 33.0 40.0 34 37.45763932884854 40.0 37.0 40.0 33.0 40.0 35 37.42340836588724 40.0 37.0 40.0 33.0 40.0 36 37.34323509329632 40.0 36.0 40.0 33.0 40.0 37 37.07738792688524 40.0 36.0 40.0 32.0 40.0 38 37.10410593357884 40.0 36.0 40.0 32.0 40.0 39 36.71908841603331 39.0 35.0 40.0 31.0 40.0 40 36.74921590794614 39.0 35.0 40.0 31.0 40.0 41 36.78359417499636 39.0 35.0 40.0 32.0 40.0 42 36.68820559889858 39.0 35.0 40.0 31.0 40.0 43 36.59336639093789 39.0 35.0 40.0 31.0 40.0 44 36.82104344127425 39.0 35.0 40.0 32.0 40.0 45 36.85646358253394 39.0 35.0 40.0 32.0 40.0 46 36.80604349724085 39.0 35.0 40.0 32.0 40.0 47 36.51543670737304 39.0 35.0 40.0 31.0 40.0 48 36.48565710384043 39.0 35.0 40.0 31.0 40.0 49 36.36906390266289 39.0 35.0 40.0 31.0 40.0 50 35.899521597510606 39.0 35.0 40.0 30.0 40.0 51 35.97381703399411 38.0 35.0 40.0 30.0 40.0 52 35.6287793684729 38.0 35.0 40.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 3.0 15 11.0 16 21.0 17 89.0 18 138.0 19 283.0 20 563.0 21 1061.0 22 1779.0 23 2821.0 24 4401.0 25 6466.0 26 9021.0 27 12613.0 28 17356.0 29 22563.0 30 30252.0 31 38952.0 32 51844.0 33 73725.0 34 109099.0 35 150642.0 36 228329.0 37 422810.0 38 626567.0 39 422065.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 99.70494408936746 0.24383527910542988 0.015312461522963094 0.035908170004141524 8 99.54555121503486 0.3791849024502177 0.05274292302353955 0.022520959491375548 9 98.2400967102833 0.9754306629803333 0.21768768399019464 0.5667849427461691 10 46.18372715163591 42.37732681135898 4.146095210378446 7.292850826626669 11 29.62616550442696 23.029852583977885 29.53666371909244 17.807318192502713 12 29.162582970483214 17.33016935492898 28.730296958775003 24.776950715812802 13 23.39641142166355 17.870941022397833 32.29111586205352 26.44153169388509 14 26.913039098266157 19.393904118022366 30.127760552502263 23.565296231209214 15 25.094482812657404 20.69340377662611 29.140957476577977 25.071155934138506 16 26.67009928474686 30.05943652827992 24.001790931172277 19.268673255800937 17 29.066096553576827 20.491118100717493 24.350216590738647 26.09256875496704 18 25.24948790561793 21.115391934093733 27.648484984161453 25.98663517612689 19 25.590302107702122 21.17628359395113 27.284254356999742 25.949159941347006 20 24.27396769607898 23.13900983892813 28.134722797434492 24.4522996675584 21 26.260647645485175 20.998488901823393 29.460996877063767 23.279866575627665 22 25.68441554080525 21.165896193151926 28.059145501964426 25.0905427640784 23 24.012536518205934 22.375267240510862 29.780812411153022 23.83138383013018 24 24.818186906054468 23.097146822776168 26.49378211083625 25.59088416033311 25 24.11721644522549 26.108239402724454 25.461981889208516 24.312562262841535 26 26.30201815556476 24.62534839207961 25.809646403026676 23.26298704932896 27 26.23315685199073 23.45784036087263 25.30899159381681 25.00001119331983 28 28.461254323419784 22.194875698183324 24.902494990989375 24.441374987407517 29 27.842039870605223 22.74966140207524 24.519190946842926 24.88910778047661 30 26.71711122801912 23.10825059604428 25.850569180313187 24.324068995623414 31 27.689049575213513 24.1386628460135 24.394004857900807 23.778282720872184 32 26.91921781081051 24.03460974490424 24.75219109235608 24.29398135192917 33 27.87306775316491 23.003928855259183 24.88798844849394 24.23501494308197 34 25.424372334590718 24.995399545551216 26.27725853210804 23.30296958775003 35 25.92475850412474 25.21017696638646 26.749616628795934 22.115447900692867 36 26.18121984799472 25.674341552961195 25.33388553711145 22.81055306193264 37 28.248760339829186 26.31518149968099 23.26531525985292 22.1707429006369 38 25.65002966229754 26.46203785580765 24.996250237858046 22.891682244036758 39 26.474171414499825 25.451773581526542 24.565979023718647 23.508075980254983 40 25.49529320901286 25.991425917012727 24.79463616113903 23.718644712835378 41 25.160254759959255 25.58815299029539 25.290947962256126 23.960644287489227 42 23.686855684527476 24.367722942947648 26.629848106649952 25.315573265874924 43 24.501908461030457 25.344272937910656 26.109806467500196 24.04401213355869 44 24.323128756757967 25.31391665454057 25.432207658469423 24.930746930232036 45 24.181600420868826 24.782323509329633 25.807004779547565 25.229071290253973 46 25.037396881541095 25.322916083681257 25.33361689743561 24.306070137342033 47 24.393736218224962 25.74338194965245 25.787752269445598 24.075129562676995 48 25.657148613707335 25.221773245726954 25.104064294429087 24.017013846136624 49 24.76553352958954 26.431547252599646 24.928911225780453 23.874007992030354 50 25.18134297451281 25.99182887652649 25.18080569516113 23.646022453799574 51 23.964450016230312 26.981721308722957 24.375020987474674 24.678807687572057 52 24.977714100224986 26.98498975811236 23.718823805952606 24.318472335710048 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 16.0 2 32.0 3 17.5 4 3.0 5 62.0 6 121.0 7 1054.5 8 1988.0 9 4822.0 10 7656.0 11 8962.5 12 10269.0 13 9884.5 14 9446.0 15 9392.0 16 9863.5 17 10335.0 18 10005.5 19 9676.0 20 10707.5 21 11739.0 22 13867.5 23 15996.0 24 16514.5 25 17033.0 26 23977.5 27 30922.0 28 32397.5 29 33873.0 30 38724.0 31 43575.0 32 44694.5 33 45814.0 34 50894.0 35 55974.0 36 61549.0 37 67124.0 38 68653.0 39 75052.0 40 79922.0 41 85364.5 42 90807.0 43 100067.0 44 109327.0 45 112952.0 46 116577.0 47 121376.0 48 126175.0 49 135585.0 50 144995.0 51 148337.5 52 151680.0 53 157682.0 54 163684.0 55 169392.0 56 175100.0 57 162009.5 58 148919.0 59 140528.0 60 132137.0 61 125092.0 62 118047.0 63 97716.0 64 63757.5 65 50130.0 66 41459.5 67 32789.0 68 29761.5 69 26734.0 70 24307.0 71 21880.0 72 14566.0 73 7252.0 74 6021.5 75 4791.0 76 3421.0 77 2051.0 78 1649.0 79 1247.0 80 889.5 81 532.0 82 293.0 83 54.0 84 51.0 85 48.0 86 26.0 87 4.0 88 4.0 89 2.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2233475.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.505690525164077 #Duplication Level Percentage of deduplicated Percentage of total 1 68.41746692931916 5.819378002164366 2 10.157023416344973 1.7278499567255023 3 4.50633300231013 1.1498842176295039 4 2.3487505452251938 0.7991098103398357 5 1.3577597899839877 0.5774342290557787 6 0.8211252614130042 0.419054241358408 7 0.5796025673160893 0.3450944045626864 8 0.40176995719529707 0.27338647345692924 9 0.3156058299589594 0.24160009658116197 >10 4.621586575566502 10.674300452842079 >50 3.283553139326737 20.29622151737261 >100 3.038447999924276 45.78512599695384 >500 0.11613460470440806 6.594950154077685 >1k 0.034229146649720266 4.975885758067505 >5k 6.112347616021477E-4 0.32072468881211214 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TTCATAGGGATTCTCCTCCACCTCTGACATGCCCAGATATTTCTCTAGATCT 6169 0.2762063600443255 No Hit TTCATAGGGATGTCATATTTATTCAGATTTATAAAGCTAGCAATGTCCGTGG 3698 0.16557158687695184 No Hit TTCATAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 3552 0.15903468809814303 No Hit TTCATAGGGATATGTACTTTGAGTATAACATCAAGTTTTAACAAATAAAGAC 3339 0.14949797960577127 No Hit TTCATAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 3204 0.14345358689933846 No Hit TTCATAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 2837 0.12702179339370265 No Hit TTCATAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 2736 0.12249969218370475 No Hit TTCATAGGGACTGTGGGAATTTTGCTTAGAACTCTTGAAGGAATATTCTTTG 2682 0.12008193510113165 No Hit TTCATAGGGTTAGGCAAGAATTAGTGCTGTTGTATAAACAAAATACCAGCCA 2636 0.11802236425301381 No Hit TTCATAGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 2618 0.11721644522548942 No Hit TTCATAGGGATATTTAGTGCTCTGTCTGCTGTCCCACTGTGTGGTCCAGTCC 2410 0.10790360312965222 No Hit TTCATAGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 2355 0.10544107276777219 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.009626255050985572 0.0 0.0 0.0 0.0 7 0.009715801609599391 0.0 0.0 0.0 0.0 8 0.010073987844054668 0.0 0.0 0.0 0.0 9 0.010432174078509946 0.0 0.0 0.0 0.0 10 0.015267688243656185 0.0 0.0 0.0 0.0 11 0.02337165179820683 0.0 0.0 0.0 0.0 12 0.028475805639194527 0.0 0.0 0.0 0.0 13 0.033669506038796045 0.0 0.0 0.0 0.0 14 0.04611647768611692 0.0 0.0 0.0 0.0 15 0.055026360268191944 0.0 0.0 0.0 0.0 16 0.0683240242223441 0.0 0.0 0.0 0.0 17 0.07593548170451875 0.0 0.0 0.0 0.0 18 0.08408421853837629 0.0 0.0 0.0 0.0 19 0.0929493278411444 0.0 0.0 0.0 0.0 20 0.10114283795430887 0.0 0.0 0.0 0.0 21 0.1087095221571766 0.0 0.0 0.0 0.0 22 0.11855964360469672 0.0 0.0 0.0 0.0 23 0.12626064764548517 0.0 0.0 0.0 0.0 24 0.1343198379207289 0.0 0.0 0.0 0.0 25 0.14143878933052753 0.0 0.0 0.0 0.0 26 0.1500352589574542 0.0 0.0 0.0 0.0 27 0.157064663808639 0.0 0.0 0.0 0.0 28 0.16575067999417947 0.0 0.0 0.0 0.0 29 0.17448146945902684 0.0 0.0 0.0 0.0 30 0.18361521843763642 0.0 0.0 0.0 0.0 31 0.1923460079024838 0.0 0.0 0.0 0.0 32 0.20085293097079662 0.0 0.0 0.0 4.477327930690964E-5 33 0.208598708290892 0.0 0.0 0.0 4.477327930690964E-5 34 0.21526992690762153 0.0 0.0 0.0 4.477327930690964E-5 35 0.22601551394127983 0.0 0.0 0.0 4.477327930690964E-5 36 0.23846248558860073 0.0 0.0 0.0 4.477327930690964E-5 37 0.247238048332755 0.0 0.0 0.0 4.477327930690964E-5 38 0.25699862322166134 0.0 0.0 0.0 4.477327930690964E-5 39 0.26559509284858795 0.0 0.0 0.0 4.477327930690964E-5 40 0.27441542887204917 0.0 0.0 0.0 4.477327930690964E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTACGT 145 0.0 46.000004 27 CAATTCG 20 6.3127396E-4 46.0 32 TAAGTCG 65 0.0 46.0 32 TTATCCG 25 3.4181983E-5 46.0 39 CGTTAGG 25 3.4181983E-5 46.0 44 TAACACG 20 6.3127396E-4 46.0 41 ACGTACG 135 0.0 46.0 26 GACGAAT 20 6.3127396E-4 46.0 9 TATACGC 25 3.4181983E-5 46.0 35 CGATCGT 25 3.4181983E-5 46.0 26 TATAACG 25 3.4181983E-5 46.0 23 ACGAACG 25 3.4181983E-5 46.0 10 CGTATTG 150 0.0 44.466663 20 TTACGTA 140 0.0 44.357143 24 TAGGGAT 37155 0.0 43.418648 5 AGGGATC 9740 0.0 43.237164 6 TACGTAC 150 0.0 42.93333 25 CGCATAC 70 0.0 42.714287 23 TGACGTA 70 0.0 42.714287 25 ATAGGGA 100300 0.0 42.548855 4 >>END_MODULE