##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527133_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2168888 Sequences flagged as poor quality 0 Sequence length 52 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.39768996831556 33.0 31.0 34.0 31.0 34.0 2 32.85861741131861 34.0 31.0 34.0 31.0 34.0 3 32.88457080310279 34.0 31.0 34.0 31.0 34.0 4 36.24765409739922 37.0 37.0 37.0 35.0 37.0 5 36.31076016834433 37.0 37.0 37.0 35.0 37.0 6 36.29313085784052 37.0 37.0 37.0 35.0 37.0 7 36.5018359638672 37.0 37.0 37.0 35.0 37.0 8 36.65208300290287 37.0 37.0 37.0 35.0 37.0 9 38.6704952030718 39.0 39.0 39.0 39.0 39.0 10 38.11884200567295 39.0 39.0 39.0 37.0 39.0 11 37.787181265238225 39.0 38.0 39.0 35.0 39.0 12 37.58662687976511 39.0 37.0 39.0 35.0 39.0 13 37.43957272113636 39.0 37.0 39.0 35.0 39.0 14 38.36206018936893 40.0 38.0 40.0 35.0 40.0 15 38.43520873369211 40.0 38.0 40.0 35.0 40.0 16 38.5046208010741 40.0 38.0 40.0 35.0 40.0 17 38.4803922563083 40.0 38.0 40.0 35.0 40.0 18 38.46003297542335 40.0 38.0 40.0 35.0 40.0 19 38.4721751422849 40.0 38.0 40.0 35.0 40.0 20 38.44713097218482 40.0 38.0 40.0 35.0 40.0 21 34.19605161723427 40.0 35.0 40.0 10.0 40.0 22 35.03410134594318 40.0 35.0 40.0 18.0 40.0 23 37.0928858474942 40.0 35.0 40.0 31.0 40.0 24 37.80825565912117 40.0 37.0 40.0 34.0 40.0 25 38.03669069126668 40.0 38.0 40.0 34.0 40.0 26 38.11550988340569 40.0 38.0 40.0 34.0 40.0 27 38.08230254397645 40.0 38.0 40.0 34.0 40.0 28 38.03647952314734 40.0 38.0 40.0 34.0 40.0 29 38.017208357462444 40.0 38.0 40.0 34.0 40.0 30 37.9098445839527 40.0 38.0 40.0 34.0 40.0 31 37.80714587383028 40.0 38.0 40.0 34.0 40.0 32 37.7798291105857 40.0 37.0 40.0 34.0 40.0 33 37.48929635831818 40.0 37.0 40.0 33.0 40.0 34 37.46868441339525 40.0 37.0 40.0 33.0 40.0 35 37.42700960123344 40.0 37.0 40.0 33.0 40.0 36 37.28300954221702 40.0 36.0 40.0 33.0 40.0 37 37.23336566941216 40.0 36.0 40.0 33.0 40.0 38 37.184218364433754 40.0 36.0 40.0 33.0 40.0 39 37.02901579058024 39.0 35.0 40.0 32.0 40.0 40 32.11650255799285 38.0 32.0 40.0 9.0 40.0 41 33.17098070531996 38.0 32.0 40.0 15.0 40.0 42 35.019264249698466 38.0 33.0 40.0 26.0 40.0 43 35.886369420643206 38.0 35.0 40.0 30.0 40.0 44 36.539563592034256 39.0 35.0 40.0 31.0 40.0 45 36.748207837380264 39.0 35.0 40.0 32.0 40.0 46 36.78123167263593 39.0 35.0 40.0 32.0 40.0 47 36.73384056714777 39.0 35.0 40.0 32.0 40.0 48 36.60401597500655 39.0 35.0 40.0 32.0 40.0 49 36.42768829003619 39.0 35.0 40.0 31.0 40.0 50 36.34726735543744 39.0 35.0 40.0 31.0 40.0 51 36.15738848663462 39.0 35.0 40.0 31.0 40.0 52 35.75662367074741 38.0 35.0 40.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 5.0 15 10.0 16 34.0 17 64.0 18 186.0 19 332.0 20 649.0 21 1075.0 22 1864.0 23 3064.0 24 4715.0 25 6544.0 26 9490.0 27 13217.0 28 18045.0 29 24313.0 30 32074.0 31 42838.0 32 59007.0 33 73396.0 34 124974.0 35 183634.0 36 288159.0 37 260373.0 38 593195.0 39 427630.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 99.70846811822463 0.24265891092578318 0.013417013695497417 0.0354559571540808 8 99.57323753001538 0.3748464651010103 0.03282788230650915 0.019088122577099416 9 98.19935377022696 0.9862657730597431 0.25243350509569884 0.5619469516176031 10 46.226315051768466 42.32791181471796 4.1777168761134735 7.268056257400106 11 29.683044952067604 23.002248156659082 29.520749803585982 17.793957087687332 12 29.109110290618972 17.310529635462967 28.79383352206292 24.786526551855147 13 23.516059842647476 17.870355684572 32.25076629129766 26.36281818148286 14 26.91992394259178 19.3510683815854 30.147199855409777 23.581807820413044 15 25.06574797776556 20.49856885187248 29.268224085337742 25.167459085024213 16 27.724944764321624 22.47548052273792 27.366696666678962 22.432878046261497 17 28.998177868105685 20.486903888075364 24.394897292990695 26.12002095082826 18 25.19198778360155 21.093113152915226 27.683079993065572 26.03181907041765 19 25.612525865789287 21.16388674749457 27.280062409861642 25.943524976854498 20 24.324584764174084 23.12682812574923 28.07747564650641 24.47111146357027 21 31.304843772476953 20.170566668265028 27.53595390817783 20.988635651080184 22 25.82738251122234 21.118702302746843 27.988766593756804 25.06514859227401 23 24.003129714397424 22.30447123134067 29.742522435460018 23.949876618801895 24 25.011065578305562 23.075511506357174 26.475456547318256 25.437966368019005 25 24.15094739792926 26.04348403421477 25.50362213263202 24.301946435223947 26 26.32754665063387 24.63336050547562 25.782705238813623 23.256387605076885 27 26.30998004507379 23.46142354976375 25.340543172353758 24.8880532328087 28 28.50539078089786 22.15024473370686 24.88408806724921 24.460276418146073 29 27.66887916757343 22.738749073257818 24.610445537067843 24.98192622210091 30 26.69294126759888 23.13189984913928 25.85168067691831 24.323478206343527 31 27.690549258421825 24.196546801863445 24.368570437938704 23.744333501776023 32 26.859247688216264 24.024200419754273 24.831249930840134 24.28530196118933 33 27.867321871853225 23.006812707710125 24.840609565823595 24.285255854613055 34 25.35806367133757 25.02983095484875 26.304401149344734 23.307704224468946 35 25.912725783904012 25.195860736008495 26.813002792214256 22.07841068787323 36 26.2810712217505 25.591639586737536 25.336854646251904 22.79043454526006 37 28.109611930168825 26.36788990487291 23.24569087938151 22.276807285576755 38 25.67057404531723 26.41731615463777 25.013785866305682 22.898323933739317 39 26.2054103300862 25.509615987547534 24.555302071845112 23.72967161052115 40 26.236255629612966 29.933357554654737 22.64897956925392 21.18140724647838 41 25.091198807868366 25.63682403148526 25.26128596774015 24.01069119290623 42 23.709292503808406 24.3947128666856 26.616081604951475 25.279913024554517 43 24.534784645403544 25.295174301300943 26.15704453157563 24.012996521719888 44 24.361700558074 25.29913946686044 25.367377199744755 24.971782775320808 45 24.09598835901162 24.83074275850113 25.79284868559372 25.280420196893523 46 24.98049691823644 25.38323786198273 25.334134358251788 24.302130861529044 47 24.20922611033857 25.78819192139013 25.756193957456542 24.24638801081476 48 25.556275842736003 25.287658929368412 25.09161376705482 24.064451460840765 49 24.736593129751284 26.46236227965667 24.98252560759246 23.818518982999585 50 25.09230536569892 25.99765409739922 25.29835565506379 23.611684881838066 51 23.972053881989297 27.091163766870395 24.31683885936019 24.61994349178012 52 24.939738704810946 27.07129183249665 23.66701277336589 24.321956689326512 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 8.5 2 17.0 3 11.5 4 6.0 5 60.5 6 115.0 7 919.0 8 1723.0 9 4353.0 10 6983.0 11 8249.5 12 9516.0 13 9363.5 14 9316.5 15 9422.0 16 9605.0 17 9788.0 18 9645.0 19 9502.0 20 10408.0 21 11314.0 22 13188.5 23 15063.0 24 15656.5 25 16250.0 26 22917.5 27 29585.0 28 30961.5 29 32338.0 30 37072.0 31 41806.0 32 42864.0 33 43922.0 34 48632.5 35 53343.0 36 59370.0 37 65397.0 38 66843.0 39 72865.5 40 77442.0 41 82000.5 42 86559.0 43 96613.0 44 106667.0 45 110252.0 46 113837.0 47 117803.5 48 121770.0 49 131039.5 50 140309.0 51 144294.0 52 148279.0 53 153459.5 54 158640.0 55 164507.0 56 170374.0 57 157966.5 58 145559.0 59 137281.0 60 129003.0 61 121887.0 62 114771.0 63 95272.0 64 62952.0 65 50131.0 66 41286.0 67 32441.0 68 28946.0 69 25451.0 70 23825.5 71 22200.0 72 14734.5 73 7269.0 74 6048.5 75 4828.0 76 3450.0 77 2072.0 78 1641.0 79 1210.0 80 904.5 81 599.0 82 329.5 83 60.0 84 53.5 85 47.0 86 25.5 87 4.0 88 3.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2168888.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.786828809879719 #Duplication Level Percentage of deduplicated Percentage of total 1 69.240590308066 6.084052137319928 2 9.888924039597125 1.7378456529968827 3 4.257444017267219 1.1222829524212095 4 2.2730908648076595 0.7989304119346539 5 1.2803178195768958 0.5624966751430326 6 0.812988674540536 0.42861553845352246 7 0.5548840374692985 0.34129697326043257 8 0.41317340896845 0.2904387210720153 9 0.29794104696101487 0.23561612775744942 >10 4.63136759456053 11.233358153100998 >50 3.3183521131180442 21.058917153555782 >100 2.890297026407278 44.68269026246531 >500 0.10608858056808618 6.138744941384212 >1k 0.033923674018864765 4.939806886564655 >5k 6.167940730702685E-4 0.3449074125699149 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TTCATAGGGATTCTCCTCCACCTCTGACATGCCCAGATATTTCTCTAGATCT 6364 0.29342225140256206 No Hit TTCATAGGGATGTCATATTTATTCAGATTTATAAAGCTAGCAATGTCCGTGG 3654 0.16847342970222529 No Hit TTCATAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 3524 0.162479574786711 No Hit TTCATAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 3211 0.14804821641320345 No Hit TTCATAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 3120 0.1438525179723434 No Hit TTCATAGGGATATGTACTTTGAGTATAACATCAAGTTTTAACAAATAAAGAC 3100 0.1429303864468797 No Hit TTCATAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 2550 0.11757176949662686 No Hit TTCATAGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 2526 0.11646521166607036 No Hit TTCATAGGGACTGTGGGAATTTTGCTTAGAACTCTTGAAGGAATATTCTTTG 2477 0.11420598942868421 No Hit TTCATAGGGTTAGGCAAGAATTAGTGCTGTTGTATAAACAAAATACCAGCCA 2422 0.11167012773365892 No Hit TTCATAGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 2343 0.10802770820807714 No Hit TTCATAGGGATATTTAGTGCTCTGTCTGCTGTCCCACTGTGTGGTCCAGTCC 2283 0.10526131363168591 No Hit TTCATAGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 2220 0.10235659932647515 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.008483610034266408 0.0 0.0 0.0 0.0 7 0.008483610034266408 0.0 0.0 0.0 0.0 8 0.008714142915632342 0.0 0.0 0.0 0.0 9 0.009221315254637399 0.0 0.0 0.0 0.0 10 0.015076850441332149 0.0 0.0 0.0 0.0 11 0.02351435389932537 0.0 0.0 0.0 0.0 12 0.02950820881483968 0.0 0.0 0.0 0.0 13 0.03425718617097794 0.0 0.0 0.0 0.0 14 0.045829936815547874 0.0 0.0 0.0 0.0 15 0.05523567837527802 0.0 0.0 0.0 0.0 16 0.06763834739276532 0.0 0.0 0.0 0.0 17 0.0745082272574702 0.0 0.0 0.0 0.0 18 0.08142421369844824 0.0 0.0 0.0 0.0 19 0.08870905274961179 0.0 0.0 0.0 0.0 20 0.09530229315667753 0.0 0.0 0.0 0.0 21 0.10166500068237733 0.0 0.0 0.0 0.0 22 0.11116295539465385 0.0 0.0 0.0 0.0 23 0.11867832732718334 0.0 0.0 0.0 0.0 24 0.12674697817499106 0.0 0.0 0.0 0.0 25 0.13449288298888648 0.0 0.0 0.0 0.0 26 0.1418238286163232 0.0 0.0 0.0 0.0 27 0.1499385860404041 0.0 0.0 0.0 0.0 28 0.15897547498994877 0.0 0.0 0.0 0.0 29 0.1667213798038442 0.0 0.0 0.0 0.0 30 0.17492835038047147 0.0 0.0 0.0 0.0 31 0.18350417356728424 0.0 0.0 0.0 0.0 32 0.19318655458465353 0.0 0.0 0.0 4.6106576273186995E-5 33 0.19991811472053883 0.0 0.0 0.0 4.6106576273186995E-5 34 0.20789455241580018 0.0 0.0 0.0 4.6106576273186995E-5 35 0.21789967946708175 0.0 0.0 0.0 4.6106576273186995E-5 36 0.22951853668792488 0.0 0.0 0.0 4.6106576273186995E-5 37 0.23698780204418116 0.0 0.0 0.0 4.6106576273186995E-5 38 0.24699292909546275 0.0 0.0 0.0 4.6106576273186995E-5 39 0.254462194451719 0.0 0.0 0.0 4.6106576273186995E-5 40 0.2645134280792738 0.0 0.0 0.0 4.6106576273186995E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGAAA 20 6.3126994E-4 46.0 34 AATTGCG 30 1.8621722E-6 46.0 31 TCGTCTA 20 6.3126994E-4 46.0 17 ATAACGA 50 1.6370905E-11 46.0 38 ATTATCG 20 6.3126994E-4 46.0 39 ACGAACG 30 1.8621722E-6 46.0 10 CGTACGT 105 0.0 43.809525 27 ACGTACG 105 0.0 43.809525 26 TAGGGAT 35965 0.0 43.531487 5 AGGGATC 9360 0.0 43.002136 6 TAGGGAC 16275 0.0 42.72135 5 TAGGGGC 20375 0.0 42.71509 5 ATAGGGA 97080 0.0 42.706837 4 AGGGATG 9275 0.0 42.67709 6 TTCATAG 233725 0.0 42.55873 1 TAGGGAG 28905 0.0 42.554577 5 TCATAGG 232915 0.0 42.534916 2 CATAGGG 229355 0.0 42.494167 3 ACGGGTA 65 0.0 42.46154 30 ATAGGGG 106575 0.0 42.28159 4 >>END_MODULE