##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527124_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 956158 Sequences flagged as poor quality 0 Sequence length 52 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.25559792419244 33.0 31.0 34.0 31.0 34.0 2 32.458533003959595 34.0 31.0 34.0 31.0 34.0 3 32.85021094839974 34.0 31.0 34.0 31.0 34.0 4 35.99731006800131 37.0 35.0 37.0 35.0 37.0 5 36.223497580943736 37.0 37.0 37.0 35.0 37.0 6 35.772632765714455 37.0 35.0 37.0 35.0 37.0 7 36.46309919490294 37.0 37.0 37.0 35.0 37.0 8 36.65587800342621 37.0 37.0 37.0 35.0 37.0 9 38.65812867747799 39.0 39.0 39.0 39.0 39.0 10 38.09591301855969 39.0 39.0 39.0 37.0 39.0 11 37.699704442152864 39.0 38.0 39.0 35.0 39.0 12 37.39033507014531 39.0 37.0 39.0 35.0 39.0 13 37.270970906481985 39.0 37.0 39.0 35.0 39.0 14 38.18890810932921 40.0 38.0 40.0 35.0 40.0 15 38.23254629465005 40.0 38.0 40.0 35.0 40.0 16 38.29660474524085 40.0 38.0 40.0 35.0 40.0 17 38.267720397674864 40.0 38.0 40.0 35.0 40.0 18 38.211935684269754 40.0 38.0 40.0 34.0 40.0 19 38.177154821692646 40.0 38.0 40.0 34.0 40.0 20 38.143270254497686 40.0 38.0 40.0 34.0 40.0 21 33.832497348764534 40.0 35.0 40.0 10.0 40.0 22 34.56697219497196 40.0 34.0 40.0 16.0 40.0 23 36.584590622052005 39.0 34.0 40.0 30.0 40.0 24 37.33726643504525 39.0 36.0 40.0 33.0 40.0 25 37.58419424404753 39.0 37.0 40.0 33.0 40.0 26 37.58551515544502 40.0 37.0 40.0 33.0 40.0 27 37.59485043266908 40.0 37.0 40.0 33.0 40.0 28 37.4756692931503 40.0 36.0 40.0 33.0 40.0 29 37.418914028852974 40.0 36.0 40.0 33.0 40.0 30 37.26688267001897 40.0 36.0 40.0 33.0 40.0 31 37.148237006854515 40.0 36.0 40.0 33.0 40.0 32 37.0427439816432 39.0 35.0 40.0 32.0 40.0 33 36.723524773102355 39.0 35.0 40.0 31.0 40.0 34 36.5211649120752 39.0 35.0 40.0 31.0 40.0 35 36.446270386275074 39.0 35.0 40.0 31.0 40.0 36 36.2444930649537 38.0 35.0 40.0 31.0 40.0 37 36.007075190501986 38.0 35.0 40.0 30.0 40.0 38 35.909597576969496 38.0 35.0 40.0 30.0 40.0 39 35.67466464747458 38.0 35.0 40.0 29.0 40.0 40 30.80661982643036 36.0 29.0 40.0 8.0 40.0 41 31.633362896090397 36.0 28.0 40.0 12.0 40.0 42 33.35663771050391 35.0 30.0 40.0 23.0 40.0 43 34.104450310513535 36.0 33.0 39.0 26.0 40.0 44 34.86402561083001 37.0 34.0 40.0 28.0 40.0 45 35.07209373346246 37.0 34.0 40.0 29.0 40.0 46 35.0637248237216 36.0 34.0 40.0 29.0 40.0 47 34.95450228937059 36.0 34.0 40.0 29.0 40.0 48 34.77978430343102 36.0 34.0 40.0 28.0 40.0 49 34.555085038246816 35.0 34.0 39.0 28.0 40.0 50 34.42727770933256 35.0 34.0 39.0 28.0 40.0 51 34.19777589059549 35.0 34.0 39.0 27.0 40.0 52 33.77635181633161 35.0 33.0 38.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 0.0 14 2.0 15 8.0 16 45.0 17 68.0 18 185.0 19 355.0 20 669.0 21 1034.0 22 1716.0 23 2530.0 24 3693.0 25 5181.0 26 7361.0 27 10109.0 28 13063.0 29 15639.0 30 18811.0 31 24764.0 32 33615.0 33 44291.0 34 76981.0 35 100346.0 36 128189.0 37 153270.0 38 225087.0 39 89145.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 100.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 99.60194863192066 0.3230637614285505 0.04172950495629383 0.03325810169448982 8 99.2619420639685 0.6202949721698715 0.040369897025387014 0.07739306683623418 9 98.42410982285355 1.0215884822382912 0.2418010412505046 0.3125006536576591 10 65.5218070653595 21.687419861570994 4.216562534643856 8.574210538425657 11 32.15629634432803 29.5221082708088 16.230894893940125 22.090700490923048 12 27.990666814480452 19.486110036207403 27.84100535685525 24.682217792456896 13 21.23048701156085 18.961510545328284 30.978143779584542 28.82985866352632 14 23.33651969653551 20.176163353755342 31.424408936598347 25.062908013110803 15 24.31041731596661 18.843852166692116 30.097013255131472 26.748717262209805 16 29.5759696619178 18.615228863848863 26.954750156354912 24.854051317878426 17 31.414577925405634 20.07534319641733 21.23477500580448 27.275303872372557 18 28.842513475806296 21.35327006624428 23.101307524488632 26.70290893346079 19 30.276063161109356 20.25198764220976 20.99527483951397 28.47667435716691 20 28.093892432003916 22.097289360126673 21.557525011556667 28.251293196312744 21 34.58999454065123 19.653028056032582 23.024332798554216 22.732644604761976 22 32.65705040380355 18.86738384241935 22.203129608286496 26.272436145490595 23 30.529159406708935 22.559137715733176 21.494041779705864 25.41766109785203 24 29.886901537193644 20.976449498932183 22.165060586221106 26.971588377653067 25 29.91022404246997 20.640312584321837 22.3025901576936 27.14687321551459 26 29.304989342765523 21.09912796839016 21.43484654209869 28.161036146745623 27 28.38756774507979 20.15765176884992 23.46756498402984 27.987215502040456 28 30.971764080831832 21.46120201891319 20.82291838796517 26.744115512289813 29 31.716201715616037 21.8095754049017 20.728582514605325 25.745640364876937 30 28.928273360678887 22.530167608282316 20.947793147157686 27.593765883881115 31 31.67154382434702 22.941710470445262 19.090568713538975 26.29617699166874 32 32.29476718282962 22.742475615954685 20.482493479111195 24.480263722104507 33 33.63711855153646 21.212393767557245 20.90198481840867 24.24850286249762 34 29.6561865298413 23.178177665197595 23.51002658556431 23.655609219396794 35 30.694822403828653 24.91157319187833 22.711309218769284 21.68229518552373 36 31.34868923336938 24.62249962872245 21.172651381884585 22.856159756023587 37 30.59504809874519 25.9350442081748 19.13805040589526 24.331857287184754 38 33.8653235134779 24.3306022644793 18.755268480732266 23.048805741310535 39 30.352201205240135 25.208281476492377 19.26606272185141 25.17345459641607 40 28.775578931515504 28.929423798158883 20.49629872887117 21.798698541454446 41 28.013257223178595 24.283120572123018 23.139690302230385 24.563931902468003 42 27.665929689444628 23.947401998414488 21.82223021718168 26.564438094959204 43 28.442579573668787 21.88906017624702 24.60764852670793 25.06071172337626 44 26.941677003173115 22.891718732678072 23.230156522248414 26.9364477419004 45 27.695945649150033 23.693678241462184 22.845910403929057 25.764465705458722 46 27.636854996768317 24.858862238249326 22.65859826514028 24.845684499842076 47 29.199253679831155 23.04148477552873 22.86536325586357 24.89389828877654 48 29.920264224113584 23.763541172065704 21.134896115495554 25.181298488325147 49 27.76256643776447 24.69476801951142 23.379190468520893 24.163475074203216 50 24.874654607292936 25.976669127905637 24.240972726264907 24.90770353853652 51 25.99057896289107 24.805000847140327 21.86029923924707 27.344120950721535 52 27.20627762357267 25.704747541724277 21.974401720217788 25.11457311448526 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 2.0 4 4.0 5 21.0 6 38.0 7 70.0 8 102.0 9 1435.0 10 2768.0 11 2507.0 12 2246.0 13 1879.0 14 1540.0 15 1568.0 16 1495.0 17 1422.0 18 1691.0 19 1960.0 20 2017.0 21 2074.0 22 2428.5 23 2783.0 24 3655.0 25 4527.0 26 4931.5 27 5336.0 28 6795.0 29 8254.0 30 8418.5 31 8583.0 32 9585.5 33 10588.0 34 11769.5 35 12951.0 36 13093.0 37 13235.0 38 16091.5 39 20938.5 40 22929.0 41 22310.5 42 21692.0 43 25243.5 44 28795.0 45 28040.0 46 27285.0 47 28368.5 48 29452.0 49 32520.5 50 35589.0 51 42564.0 52 49539.0 53 53096.0 54 56653.0 55 65954.0 56 75255.0 57 87175.5 58 99096.0 59 88044.5 60 76993.0 61 79160.0 62 81327.0 63 74145.0 64 61843.5 65 56724.0 66 47963.5 67 39203.0 68 32848.5 69 26494.0 70 26764.0 71 27034.0 72 23818.0 73 20602.0 74 15174.0 75 9746.0 76 6869.0 77 3992.0 78 2620.5 79 1249.0 80 840.0 81 431.0 82 279.5 83 128.0 84 96.5 85 65.0 86 41.0 87 17.0 88 10.5 89 2.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 956158.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.973627376069222 #Duplication Level Percentage of deduplicated Percentage of total 1 69.62336239532729 9.72890922781334 2 10.340200183234758 2.8898020870897043 3 4.986713468676001 2.0904742752751226 4 2.894687327475515 1.6179712833749007 5 1.7919064550076704 1.2519716547525168 6 1.2611259852842873 1.0573502755584476 7 0.9047733959657254 0.8850076406504044 8 0.6148817097130337 0.6873702313512238 9 0.48921636634177396 0.615251448858107 >10 3.849280094916797 12.276963220881312 >50 1.6765009294485655 16.938947474613705 >100 1.471551635497242 36.08506154216694 >500 0.06674593864315133 6.490485266664995 >1k 0.028268868131217033 6.382623235302352 >5k 7.852463369782508E-4 1.0018111356469275 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TAGAGAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 9130 0.9548631083984028 No Hit TAGAGAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 4000 0.418340901817482 No Hit TAGAGAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 3016 0.31542903997038146 No Hit TAGAGAGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTAGAGAGGGAAG 2514 0.26292725679228746 No Hit TAGAGAGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 2391 0.2500632740613999 No Hit TAGAGAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 2373 0.2481807400032212 No Hit TAGAGAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2235 0.23374797889051813 No Hit TAGAGAGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 2092 0.21879229165054312 No Hit TAGAGAGGGATTTTTCTTTCTGTCTTCTCCCAGGTCCCTTACGACAGACTTT 2070 0.21649141669054695 No Hit TAGAGAGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTG 2026 0.21188966677055465 No Hit TAGAGAGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 1997 0.20885669523237793 No Hit TAGAGAGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTGC 1815 0.18982218419968247 No Hit TAGAGAGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCATCA 1767 0.1848020933778727 No Hit TAGAGAGGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAACG 1688 0.1765398605669774 No Hit TAGAGAGGGTGCTTCTGTGTAAATTATGTACTGCAAAAATTTTTTTAAATCT 1519 0.1588649574651888 No Hit TAGAGAGGGGCGAACGGCGAGCAGCGGCGGCGGCGCGGGAAGTGCAGCGGAG 1451 0.1517531621342916 No Hit TAGAGAGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 1440 0.15060272465429353 No Hit TAGAGAGGGAGAGTCCATACCGGGGAGAGAACGTACAACTACAAGAAGGGCA 1413 0.14777892356702554 No Hit TAGAGAGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 1398 0.14621014518520997 No Hit TAGAGAGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCCGG 1333 0.13941210553067587 No Hit TAGAGAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 1318 0.13784332714886033 No Hit TAGAGAGGGGCTCTTTTTCGTGACGCCTCCCAGGCGCTCGGCTGTGTCAAGA 1302 0.1361699635415904 No Hit TAGAGAGAGTTAAATGGGAACTAGTATATGTGAAGAACTCTTTCTGTATTGC 1293 0.13522869651250108 No Hit TAGAGAGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 1290 0.13491494083613798 No Hit TAGAGAGGGGCTTTTTCGCAACGGGTTTGCCGTCAGAACGCAGGTGTTGTGA 1208 0.1263389523488796 No Hit TAGAGAGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCTAGGCTCACAAC 1207 0.12623436712342523 No Hit TAGAGAGGGGTCGTAGAAACCTCGACATTGAGCGCCCAACCTACACTAACCT 1200 0.12550227054524463 No Hit TAGAGAGGGGTCAAGGTCTGAGATTGACAAGGGGCTCCCTTCCCCATCTCTC 1146 0.11985466837070861 No Hit TAGAGAGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 1145 0.11975008314525425 No Hit TAGAGAGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 1132 0.11839047521434742 No Hit TAGAGAGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 1126 0.11776296386162119 No Hit TAGAGAGGGGCTCTTTCCAGCCAGCGCCGAGCGATGGGCATCTCTCGGGACA 1093 0.11431165142162696 No Hit TAGAGAGGGATTTTTGAGACTGTATTCCCCAGCATATATCTTCTAACCTTTG 1061 0.1109649242070871 No Hit TAGAGAGGGATGGGTAGTAAATACCAATGTAGTCAGTGTTCGTGTTGTGATA 1057 0.11054658330526965 No Hit TAGAGAGGGGCTCTTTCCCGTCTTGCAAGATGGCGGGTGAAAAAGCGCCTGA 1038 0.10855946402163659 No Hit TAGAGAGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGT 1010 0.10563107770891421 No Hit TAGAGAGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAA 1004 0.10500356635618799 No Hit TAGAGAGGGGCCTTTCTCCTCGTTGGGCGTCTGAAGGCAAGATGGGTCACCA 996 0.10416688455255303 No Hit TAGAGAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 989 0.10343478797437244 No Hit TAGAGAGGGGTCCGTGGTCGTTCCGCGCCGTCATGTCTGTCCTGACGCCACT 983 0.10280727662164621 No Hit TAGAGAGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGGCTGTTTG 970 0.10144766869073939 No Hit TAGAGAGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCGC 960 0.1004018164361957 No Hit TAGAGAGGGGCTCTTTCTTGACTCCATCTTCGCGGTAGCAGCAGCGGCGTCC 960 0.1004018164361957 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.017988658778151728 0.0 0.0 0.0 0.0 5 0.017988658778151728 0.0 0.0 0.0 0.0 6 0.06787581131988646 0.0 0.0 0.0 0.0 7 0.06808498177079521 0.0 0.0 0.0 0.0 8 0.07080419763260884 0.0 0.0 0.0 0.0 9 0.07540594755260113 0.0 0.0 0.0 0.0 10 0.11148785033435897 0.0 0.0 0.0 0.0 11 0.1635712926106355 0.0 0.0 0.0 0.0 12 0.1904496955524087 0.0 0.0 0.0 0.0 13 0.20791542820328857 0.0 0.0 0.0 0.0 14 0.2340617345668812 0.0 0.0 0.0 0.0 15 0.2546650239813922 0.0 0.0 0.0 0.0 16 0.2758958247486294 0.0 0.0 0.0 0.0 17 0.28991024495951506 0.0 0.0 0.0 0.0 18 0.30120544930858706 0.0 0.0 0.0 0.0 19 0.31793908538128635 0.0 0.0 0.0 0.0 20 0.3316397499158089 0.0 0.0 0.0 0.0 21 0.3448174883230596 0.0 0.0 0.0 0.0 22 0.3624923914248482 0.0 0.0 0.0 0.0 23 0.3781801752430038 0.0 0.0 0.0 0.0 24 0.3967963453738817 0.0 0.0 0.0 0.0 25 0.4139483223483985 0.0 0.0 0.0 0.0 26 0.43538829356654446 0.0 0.0 0.0 0.0 27 0.4531677818937874 0.0 0.0 0.0 0.0 28 0.49291016756644823 0.0 0.0 0.0 0.0 29 0.5097483888646018 0.0 0.0 0.0 0.0 30 0.5319204566609285 0.0 0.0 0.0 0.0 31 0.5479219961554471 0.0 0.0 0.0 0.0 32 0.5696757230499562 0.0 0.0 0.0 0.0 33 0.5862001886717467 0.0 0.0 0.0 0.0 34 0.6024108986171741 0.0 0.0 0.0 0.0 35 0.6408982615843825 0.0 0.0 0.0 0.0 36 0.6601419430679867 0.0 0.0 0.0 0.0 37 0.6765618234643228 0.0 0.0 0.0 0.0 38 0.6943413117915658 0.0 0.0 0.0 0.0 39 0.7100290956097214 0.0 0.0 0.0 0.0 40 0.7306323850242324 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAG 20 6.310918E-4 46.000004 13 TGCCCTA 20 6.310918E-4 46.000004 35 GTACCAC 20 6.310918E-4 46.000004 12 CCGATTC 20 6.310918E-4 46.000004 37 CGAAACG 20 6.310918E-4 46.000004 27 CTATCGA 20 6.310918E-4 46.000004 11 GCTATTA 20 6.310918E-4 46.000004 30 TTATGAG 40 5.6097633E-9 46.000004 40 CGTCTAA 20 6.310918E-4 46.000004 46 CAATTAG 20 6.310918E-4 46.000004 40 TTATCGC 40 5.6097633E-9 46.000004 16 ACGGGTA 20 6.310918E-4 46.000004 43 TACATAT 20 6.310918E-4 46.000004 11 TCGGATA 20 6.310918E-4 46.000004 15 ACCTAAT 20 6.310918E-4 46.000004 23 TACGATG 20 6.310918E-4 46.000004 33 CTAAACA 20 6.310918E-4 46.000004 29 TCTCGAG 20 6.310918E-4 46.000004 23 GTCAATG 20 6.310918E-4 46.000004 24 ATAAGCG 20 6.310918E-4 46.000004 38 >>END_MODULE