##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527111_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1483107 Sequences flagged as poor quality 0 Sequence length 50 %GC 57 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.42774324441864 33.0 31.0 34.0 31.0 34.0 2 32.72555587695291 34.0 31.0 34.0 31.0 34.0 3 31.858859138282 31.0 31.0 34.0 30.0 34.0 4 36.2137033942932 37.0 35.0 37.0 35.0 37.0 5 36.13784440367418 37.0 35.0 37.0 35.0 37.0 6 36.311227713172414 37.0 37.0 37.0 35.0 37.0 7 36.4618918257415 37.0 37.0 37.0 35.0 37.0 8 36.62941311719249 37.0 37.0 37.0 35.0 37.0 9 38.73688277379852 39.0 39.0 39.0 39.0 39.0 10 38.23019782119564 39.0 39.0 39.0 37.0 39.0 11 37.82480023356373 39.0 38.0 39.0 35.0 39.0 12 37.0635476739035 39.0 35.0 39.0 34.0 39.0 13 36.83322444031348 39.0 35.0 39.0 33.0 39.0 14 37.49538098060356 40.0 37.0 40.0 33.0 40.0 15 37.54802451879736 40.0 36.0 40.0 33.0 40.0 16 37.46824537946352 40.0 36.0 40.0 33.0 40.0 17 37.4338452990917 40.0 36.0 40.0 33.0 40.0 18 37.37459266256582 40.0 36.0 40.0 33.0 40.0 19 37.31679170821795 40.0 36.0 40.0 32.0 40.0 20 36.955250700050634 39.0 35.0 40.0 31.0 40.0 21 37.228024006359625 39.0 36.0 40.0 32.0 40.0 22 37.10377538505313 39.0 35.0 40.0 32.0 40.0 23 37.16305094642531 39.0 35.0 40.0 32.0 40.0 24 37.19037466615693 39.0 35.0 40.0 33.0 40.0 25 37.16931549780292 39.0 35.0 40.0 33.0 40.0 26 36.99312928871619 39.0 35.0 40.0 32.0 40.0 27 36.841320282353195 39.0 35.0 40.0 32.0 40.0 28 36.67342207945887 38.0 35.0 40.0 31.0 40.0 29 36.9425038112557 39.0 35.0 40.0 32.0 40.0 30 37.03384853554059 39.0 35.0 40.0 33.0 40.0 31 37.01711609479289 39.0 35.0 40.0 33.0 40.0 32 36.33686510818168 39.0 35.0 40.0 31.0 40.0 33 36.477177304132475 39.0 35.0 40.0 31.0 40.0 34 36.401560372919825 39.0 35.0 40.0 31.0 40.0 35 36.32679907788177 39.0 35.0 40.0 31.0 40.0 36 36.18103953389742 39.0 35.0 40.0 31.0 40.0 37 36.07843601304559 38.0 35.0 40.0 30.0 40.0 38 35.842300656662 38.0 35.0 40.0 30.0 40.0 39 35.78285585598342 38.0 35.0 40.0 30.0 40.0 40 35.59722528448723 37.0 35.0 40.0 29.0 40.0 41 35.44482427768192 37.0 34.0 40.0 29.0 40.0 42 35.3857469488041 37.0 34.0 40.0 29.0 40.0 43 35.28841277129701 37.0 34.0 40.0 29.0 40.0 44 35.09290698513324 36.0 34.0 40.0 28.0 40.0 45 34.97450554814993 36.0 34.0 40.0 28.0 40.0 46 34.71704334211894 36.0 34.0 40.0 27.0 40.0 47 34.5838762813472 35.0 34.0 40.0 26.0 40.0 48 34.48948659806744 35.0 34.0 40.0 27.0 40.0 49 34.21109265885738 35.0 33.0 39.0 26.0 40.0 50 33.72195667608608 35.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 4.0 13 4.0 14 12.0 15 30.0 16 69.0 17 140.0 18 302.0 19 583.0 20 935.0 21 1594.0 22 2588.0 23 3821.0 24 5363.0 25 7056.0 26 9654.0 27 12963.0 28 17692.0 29 23366.0 30 31210.0 31 38550.0 32 46916.0 33 66416.0 34 127478.0 35 124513.0 36 158146.0 37 246722.0 38 407149.0 39 149831.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 0.0 100.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 99.15825358520996 0.6955668067105071 0.04928841951389886 0.09689118856562608 8 99.52012902642898 0.3084740345774108 0.07072989339272216 0.10066704560089057 9 98.09191110284019 0.9114649179054511 0.37279845621388075 0.6238255230404819 10 63.50782512657549 25.122395080058286 4.244400437729712 7.125379355636512 11 39.02503325788362 23.23257863390841 18.60735604376488 19.13503206444309 12 32.726836297043974 14.87060609922278 26.63334472833046 25.769212875402786 13 26.179635049932337 15.084346577826144 29.990486188791504 28.745532183450013 14 25.09171624164676 15.522683124009259 33.187760559420184 26.19784007492379 15 27.17875379187071 17.91630678029299 29.861432789407644 25.043506638428646 16 32.85258582152198 18.895804550851693 24.430671556401528 23.820938071224802 17 32.47614636030981 19.465014998917813 23.592363868554326 24.466474772218053 18 31.39126172285614 19.80410044588826 23.156791789129173 25.647846042126428 19 31.35646989731692 21.399602321342964 21.682859025006287 25.56106875633383 20 29.838845073214543 22.81136829642096 24.07715694147489 23.27262968888961 21 30.5849813937902 19.874156079096114 24.560534068007232 24.980328459106456 22 29.902495234666144 20.064904285395457 26.218000454451364 23.814600025487035 23 28.42465176147102 20.836999623088555 25.465998070267347 25.272350545173072 24 30.55329116510137 20.740310712578392 22.853037575845843 25.853360546474395 25 28.5248468249425 21.38234126061033 23.256582296489732 26.836229617957436 26 26.531396588378314 20.472359715111587 23.296970481563367 29.699273214946732 27 25.85706897749117 18.176166655541373 25.451973458422085 30.51479090854537 28 26.85504147711527 21.24000493558455 22.99577845698254 28.90917513031764 29 28.987793867873325 21.470871622883582 22.85694828491808 26.684386224325014 30 28.751263395021397 18.76007597563763 24.58399832244066 27.904662306900313 31 29.606090457397883 19.986690103950693 25.073915772766224 25.333303665885197 32 34.27979235483347 19.840105939760246 21.42401054003521 24.456091165371074 33 33.15141793545577 19.92634381740495 23.10183958406238 23.820398663076904 34 29.516481278828838 21.26110927937094 26.94869621679353 22.27371322500669 35 27.30389648218234 26.437674422681575 24.811224004741398 21.447205090394693 36 28.79252811833536 26.511843043017123 22.242629830484248 22.452999008163268 37 29.47771131819889 26.664158418778953 21.039412530586127 22.818717732436028 38 31.208672064793706 25.83839197037031 19.858378390770188 23.094557574065796 39 30.633460701082253 22.564117086629622 21.191525628292496 25.610896583995626 40 29.292087489304546 21.458060679371076 21.22968875475606 28.02016307656831 41 24.32137398043432 23.459602038153687 22.685281641850523 29.533742339561474 42 24.282941149896807 21.879203590840042 23.2095189355859 30.628336323677253 43 26.0586727727669 20.243987790496572 24.99725238974666 28.700087046989864 44 27.333226800224125 19.38632883534364 24.25273429361469 29.027710070817548 45 26.91761282227108 20.062342096692955 23.2203070985438 29.799737982492157 46 26.691735660340083 22.3419483557154 22.581715277454695 28.38460070648982 47 25.556686065132183 22.425556618639114 25.455209907309452 26.562547408919247 48 27.343542981052614 22.744818816174423 24.530596915799062 25.3810412869739 49 29.230460108407552 21.18694065903539 23.675837279441065 25.906761953115993 50 24.852421302036873 21.939347599330326 24.381383136887628 28.826847961745173 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 1.0 6 2.0 7 2.0 8 2.0 9 44.5 10 87.0 11 190.5 12 294.0 13 1642.0 14 2990.0 15 3741.0 16 4492.0 17 4140.0 18 3788.0 19 3488.0 20 3188.0 21 3397.5 22 3607.0 23 3580.5 24 3554.0 25 3892.5 26 4231.0 27 4683.0 28 5135.0 29 6941.5 30 8748.0 31 9095.5 32 9443.0 33 10181.0 34 10919.0 35 14082.5 36 17246.0 37 19423.0 38 21600.0 39 23420.5 40 25241.0 41 26904.0 42 28567.0 43 32553.0 44 36539.0 45 36705.0 46 36871.0 47 43131.5 48 49392.0 49 50698.0 50 52004.0 51 60243.0 52 68482.0 53 74051.5 54 79621.0 55 90172.0 56 100723.0 57 117748.0 58 134773.0 59 142201.5 60 149630.0 61 153117.5 62 156605.0 63 151316.0 64 146027.0 65 127448.0 66 108869.0 67 88947.5 68 69026.0 69 58774.5 70 48523.0 71 43224.0 72 37925.0 73 31282.5 74 24640.0 75 21644.0 76 18648.0 77 13064.5 78 7481.0 79 4907.0 80 2333.0 81 1804.0 82 1275.0 83 877.0 84 479.0 85 272.5 86 66.0 87 47.0 88 28.0 89 20.0 90 12.0 91 6.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1483107.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.13735096434957 #Duplication Level Percentage of deduplicated Percentage of total 1 68.19703917582784 5.549432425032082 2 11.467053968782452 1.8662288534224092 3 4.848247856032644 1.1835568310007893 4 2.543063869961416 0.8277521293853232 5 1.475974806101849 0.6005262505894275 6 0.8390058325616633 0.40963709524143394 7 0.5751815134123275 0.3276317689989294 8 0.4160646328513401 0.27085311530916817 9 0.2807789586469941 0.20563172369236665 >10 3.347222859819219 6.987457272169023 >50 2.5082899941470274 15.196033570954986 >100 3.3131890221195808 49.577283677484736 >500 0.1301792296826646 7.0825185512223845 >1k 0.05615574613762001 7.632046384851127 >5k 8.508446384487881E-4 0.4989161609082409 >10k+ 0.0017016892768975762 1.7844941897375801 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TGTCACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 14387 0.9700581279705375 No Hit TGTCACGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 11387 0.7677800725099403 No Hit TGTCACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 7206 0.4858718892163546 No Hit TGTCACGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCA 4076 0.2748284513524648 No Hit TGTCACAGGAGTCTAGAACACACAAAACTCGCAGGCAATCCCGGGGCCAG 3406 0.22965301896626472 No Hit TGTCACGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 3382 0.22803479452258 No Hit TGTCACGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 3215 0.21677464943527341 No Hit TGTCACGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 3179 0.21434731276974622 No Hit TGTCACGGGGACTGTCGAGTCGCGTCCACCCGCGAGCACAGCTTCTTTGC 3168 0.2136056265663907 No Hit TGTCACGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 3015 0.20328944573790023 No Hit TGTCACGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 2933 0.19776051222197724 No Hit TGTCACGGGGACAGCATGCTCTCTCCCTATAGGCACGGCCTCCGCCGTGT 2638 0.17786983676835183 No Hit TGTCACGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTT 2532 0.1707226788087441 No Hit TGTCACGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 2433 0.16404750297854437 No Hit TGTCACGGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTC 2338 0.15764203122229212 No Hit TGTCACGGGGAAGTGTTCCTGGTCTGTGTGTGTGGCTGTCCGTGTTGTCG 2327 0.1569003450189366 No Hit TGTCACGGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAA 2252 0.15184339363242166 No Hit TGTCACGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 2061 0.1389650241014303 No Hit TGTCACGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 2030 0.13687481752833747 No Hit TGTCACGGCACGACGCTACTCAGACTACCCAGATGCTTACACCACATGAA 2008 0.13539144512162643 No Hit TGTCACGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATC 2001 0.13491946299221835 No Hit TGTCACGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 1785 0.12035544299905537 No Hit TGTCACGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCT 1778 0.1198834608696473 No Hit TGTCACGGGGAGACGTTCTCGCCCAGAGTCGCCGCGGTTTCCTGCTTCAA 1608 0.10842103772688012 No Hit TGTCACGGGGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGCT 1600 0.1078816295789852 No Hit TGTCACGGGACCTTCAAGGCTTTTGACAAGCATATGAATTTGATCCTCTG 1549 0.10444290263615505 No Hit TGTCACGGGGGGGCCTCCTCAACTTTCCTGATGACTCTACCCATAGCAGG 1511 0.10188071393365415 No Hit TGTCACGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCT 1494 0.10073447161937743 No Hit TGTCACGGGACTTTCAGAGTCCATAGAATGTTGACACAGTGATTCTTTGA 1494 0.10073447161937743 No Hit TGTCACGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCTAGGCTCACA 1486 0.1001950634714825 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 2.69704073947463E-4 0.0 0.0 0.0 0.0 8 4.045561109211945E-4 0.0 0.0 0.0 0.0 9 6.068341663817917E-4 0.0 0.0 0.0 0.0 10 0.003708431016777616 0.0 0.0 0.0 0.0 11 0.00539408147894926 0.0 0.0 0.0 0.0 12 0.007349436015068367 0.0 0.0 0.0 0.0 13 0.011664701198227774 0.0 0.0 0.0 0.0 14 0.017530764806585095 0.0 0.0 0.0 0.0 15 0.023127124340994953 0.0 0.0 0.0 0.0 16 0.03324102711402482 0.0 0.0 0.0 0.0 17 0.038904812666921536 0.0 0.0 0.0 0.0 18 0.04436632016435766 0.0 0.0 0.0 0.0 19 0.05265972043824215 0.0 0.0 0.0 0.0 20 0.057851523861730814 0.0 0.0 0.0 0.0 21 0.0639872915440356 0.0 0.0 0.0 0.0 22 0.07019048524482724 0.0 0.0 0.0 0.0 23 0.07673080903805322 0.0 0.0 0.0 0.0 24 0.08266429866489741 0.0 0.0 0.0 0.0 25 0.0885977882917416 0.0 0.0 0.0 0.0 26 0.09412672180766458 0.0 0.0 0.0 0.0 27 0.09898139513871893 0.0 0.0 0.0 0.0 28 0.10504973680253683 0.0 0.0 0.0 0.0 29 0.10976955809661744 0.0 0.0 0.0 0.0 30 0.1149613615201061 0.0 0.0 0.0 1.348520369737315E-4 31 0.11995088688813417 0.0 0.0 0.0 1.348520369737315E-4 32 0.12750260095866314 0.0 0.0 0.0 1.348520369737315E-4 33 0.1326944043821518 0.0 0.0 0.0 1.348520369737315E-4 34 0.13815591187958792 0.0 0.0 0.0 1.348520369737315E-4 35 0.14698872030136734 0.0 0.0 0.0 1.348520369737315E-4 36 0.16054135001722736 0.0 0.0 0.0 1.348520369737315E-4 37 0.16903702834657244 0.0 0.0 0.0 1.348520369737315E-4 38 0.17692587250953573 0.0 0.0 0.0 1.348520369737315E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCATT 40 8.314601E-9 44.000004 25 CCCTCGA 20 7.8572216E-4 44.000004 28 CGTATAA 20 7.8572216E-4 44.000004 23 CCGATTA 20 7.8572216E-4 44.000004 44 GTTTACG 20 7.8572216E-4 44.000004 33 TTTAACG 20 7.8572216E-4 44.000004 41 CGTGATA 20 7.8572216E-4 44.000004 32 CGACAGT 20 7.8572216E-4 44.000004 39 CTACGTC 20 7.8572216E-4 44.000004 16 TTGCGTA 20 7.8572216E-4 44.000004 42 GCGATAA 20 7.8572216E-4 44.000004 36 ACGTCGT 20 7.8572216E-4 44.000004 18 TTACGAA 20 7.8572216E-4 44.000004 35 TCATATA 65 0.0 44.000004 31 TGTACGA 20 7.8572216E-4 44.000004 20 CGATCAC 20 7.8572216E-4 44.000004 21 CGATACC 20 7.8572216E-4 44.000004 13 GTAAATC 20 7.8572216E-4 44.000004 23 AATCGGT 20 7.8572216E-4 44.000004 35 TACGTCG 20 7.8572216E-4 44.000004 17 >>END_MODULE