##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527110_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1640594 Sequences flagged as poor quality 0 Sequence length 52 %GC 57 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.3405607968821 33.0 31.0 34.0 31.0 34.0 2 32.62145600922592 34.0 31.0 34.0 31.0 34.0 3 31.715125741042574 31.0 31.0 34.0 30.0 34.0 4 36.08106880800491 37.0 35.0 37.0 35.0 37.0 5 36.05719574739393 37.0 35.0 37.0 35.0 37.0 6 36.27682473543119 37.0 37.0 37.0 35.0 37.0 7 36.32708092312906 37.0 37.0 37.0 35.0 37.0 8 36.551263140057806 37.0 37.0 37.0 35.0 37.0 9 38.67525664484936 39.0 39.0 39.0 38.0 39.0 10 38.0857402867498 39.0 38.0 39.0 37.0 39.0 11 37.72284062967437 39.0 38.0 39.0 35.0 39.0 12 37.01179450857433 39.0 35.0 39.0 34.0 39.0 13 36.8352895353756 39.0 35.0 39.0 33.0 39.0 14 37.49929781530348 40.0 36.0 40.0 33.0 40.0 15 37.47072584685791 40.0 36.0 40.0 33.0 40.0 16 32.55043661015461 39.0 33.0 40.0 3.0 40.0 17 34.078587389689346 39.0 33.0 40.0 17.0 40.0 18 36.048746978228614 39.0 34.0 40.0 30.0 40.0 19 36.96181017363223 39.0 35.0 40.0 32.0 40.0 20 37.148799763987924 39.0 35.0 40.0 32.0 40.0 21 37.39566279042835 40.0 36.0 40.0 33.0 40.0 22 37.45149500729614 40.0 36.0 40.0 33.0 40.0 23 37.41829361804322 40.0 35.0 40.0 33.0 40.0 24 37.40397563321577 40.0 35.0 40.0 33.0 40.0 25 37.34272220915108 40.0 35.0 40.0 33.0 40.0 26 37.22863426295598 39.0 35.0 40.0 33.0 40.0 27 37.068879320538784 39.0 35.0 40.0 33.0 40.0 28 36.95548502554563 39.0 35.0 40.0 32.0 40.0 29 36.71174221044329 39.0 35.0 40.0 32.0 40.0 30 36.683711509367946 39.0 35.0 40.0 31.0 40.0 31 36.630410692712516 39.0 35.0 40.0 31.0 40.0 32 36.56610166805437 38.0 35.0 40.0 31.0 40.0 33 36.1853932173347 38.0 35.0 40.0 31.0 40.0 34 35.98099895525645 38.0 35.0 40.0 30.0 40.0 35 35.858531726923296 38.0 34.0 40.0 30.0 40.0 36 35.86214078559351 38.0 34.0 40.0 30.0 40.0 37 35.58329056427123 38.0 34.0 40.0 29.0 40.0 38 35.53937293443716 37.0 34.0 40.0 29.0 40.0 39 35.142767192858194 37.0 34.0 40.0 28.0 40.0 40 35.00979645177296 37.0 34.0 40.0 27.0 40.0 41 34.94396054112108 36.0 34.0 40.0 28.0 40.0 42 34.92620843426222 36.0 34.0 40.0 28.0 40.0 43 34.80578436834464 36.0 33.0 40.0 28.0 40.0 44 35.1431670480326 36.0 34.0 40.0 29.0 40.0 45 35.23832526511739 36.0 34.0 40.0 30.0 40.0 46 35.20142887271317 36.0 34.0 40.0 30.0 40.0 47 34.90655640578961 35.0 34.0 40.0 29.0 40.0 48 34.87010558370932 35.0 34.0 40.0 29.0 40.0 49 34.787885973007334 35.0 34.0 39.0 29.0 40.0 50 34.29056549030412 35.0 34.0 39.0 27.0 40.0 51 34.38097969394012 35.0 34.0 39.0 28.0 40.0 52 34.01517560103231 35.0 33.0 38.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 4.0 13 1.0 14 7.0 15 29.0 16 78.0 17 181.0 18 356.0 19 633.0 20 1103.0 21 1798.0 22 2823.0 23 4537.0 24 6298.0 25 8848.0 26 11834.0 27 15595.0 28 20939.0 29 27463.0 30 35058.0 31 47297.0 32 63943.0 33 93625.0 34 144118.0 35 163807.0 36 207891.0 37 301120.0 38 354682.0 39 126525.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 0.0 100.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 99.16188892559646 0.7035256742375018 0.043033194074829 0.09155220609120843 8 99.53650933747167 0.3000132878701251 0.0704622837825812 0.09301509087562188 9 98.14829263059599 0.8709650285201579 0.3292100300257102 0.6515323108581405 10 63.43312239347456 25.30479814018581 4.179522782601911 7.082556683737719 11 39.24743111336504 23.090295344247266 18.54675806445714 19.115515477930554 12 32.9774459738363 14.66432280015653 26.56147712352965 25.796754102477514 13 26.332901375965044 14.985608870933333 29.79256293757017 28.888926815531445 14 25.113891675819854 15.417708464129456 32.9782383697612 26.490161490289495 15 27.038499470313802 18.153242057449923 29.924100661102017 24.884157811134262 16 30.970916631415207 26.812971399383397 21.45856927429943 20.757542694901968 17 32.47567649278249 19.385417720654836 23.600476412811457 24.538429373751214 18 31.414963117017376 19.750956056160145 23.06798635128496 25.76609447553752 19 31.30116287149654 21.26333510911292 21.791924144547643 25.643577874842894 20 30.032049367485193 22.71780830601599 24.00734124347645 23.242801083022368 21 30.80646400023406 19.879628963655847 24.35965266238935 24.954254373720737 22 29.642861061298532 20.126612678090986 26.28096896611837 23.949557294492116 23 28.62804569564438 20.64819205726706 25.28998643174362 25.433775815344926 24 30.608852647272876 20.562247576182774 22.82862182843531 26.00027794810904 25 28.532226742265305 21.41791326799927 23.140825822842213 26.909034166893207 26 26.656077006255053 20.186103325990466 23.354528908431945 29.803290759322536 27 25.81778307125346 18.198347671636007 25.318512685039686 30.665356572070845 28 26.828941224946572 21.330566855663253 22.894268783135864 28.946223136254307 29 29.287258151620694 21.3864002916017 22.64515169505679 26.681189861720817 30 28.874297967687312 18.795143710144007 24.408537395601837 27.922020926566844 31 29.92026058854293 19.70902002567363 25.00789348248256 25.36282590330088 32 34.46050637756812 19.538472041224093 21.439368911504005 24.56165266970378 33 33.58283646045274 19.71298200529808 22.990392504178363 23.713789030070817 34 29.547407829115553 21.18372979542775 26.894466272581756 22.374396102874936 35 27.266587589616933 26.202948444282985 24.947732345723562 21.58273162037652 36 28.695277442194715 26.404643683933987 22.408712941775967 22.491365932095324 37 29.70984899371813 26.437497638050612 20.94979013698697 22.902863231244293 38 31.09422562803472 25.774932737776684 19.887613876437438 23.243227757751157 39 30.98767885290328 22.48795253426503 21.07547632138116 25.448892291450537 40 29.332668533470198 21.41334175304798 21.107415972507518 28.146573740974308 41 24.36635755098458 23.406644178876675 22.539823990579023 29.68717427955972 42 24.29431047535222 21.84830616228025 23.04683547544365 30.810547886923885 43 26.055623755786012 20.129416540594445 25.06616505972837 28.748794643891173 44 27.318459045930926 19.219624111754648 24.30211252753576 29.15980431477867 45 26.925674481315916 20.10789994355703 23.1049241920914 29.861501383035655 46 26.495647308231042 22.293937439732193 22.59443835586379 28.615976896172974 47 25.832107151434176 22.267117885351283 25.419573642229583 26.481201320984958 48 27.4786449298242 22.578346623235245 24.476927259273165 25.466081187667395 49 29.201862252330557 21.101137758641077 23.648142075370263 26.048857913658104 50 25.018377490104193 22.037505927731054 24.06622235604909 28.877894226115664 51 24.620899503472522 22.56249870473743 25.55653623017029 27.260065561619758 52 25.16228878077087 22.89140396709972 23.88195982674568 28.064347425383733 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 1.5 6 3.0 7 1.5 8 0.0 9 49.0 10 98.0 11 209.5 12 321.0 13 1646.0 14 3713.5 15 4456.0 16 4166.5 17 3877.0 18 3644.0 19 3411.0 20 3349.0 21 3287.0 22 3630.0 23 3973.0 24 3961.0 25 3949.0 26 4163.5 27 4378.0 28 6009.0 29 7640.0 30 7756.5 31 7873.0 32 8876.0 33 9879.0 34 12277.5 35 14676.0 36 17878.5 37 21081.0 38 21547.5 39 24726.0 40 27438.0 41 29568.0 42 31698.0 43 35257.0 44 38816.0 45 40802.5 46 42789.0 47 46316.0 48 49843.0 49 53657.5 50 57472.0 51 64113.5 52 70755.0 53 80560.0 54 90365.0 55 100717.0 56 111069.0 57 129102.5 58 147136.0 59 153540.5 60 159945.0 61 162498.5 62 165052.0 63 161157.5 64 138313.0 65 119363.0 66 103369.5 67 87376.0 68 71664.0 69 55952.0 70 48977.0 71 42002.0 72 36400.0 73 30798.0 74 26800.5 75 22803.0 76 17530.0 77 12257.0 78 8201.0 79 4145.0 80 2779.0 81 1413.0 82 1064.5 83 716.0 84 461.5 85 207.0 86 108.5 87 10.0 88 10.5 89 8.5 90 6.0 91 4.5 92 3.0 93 3.5 94 4.0 95 2.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1640594.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.651639420344361 #Duplication Level Percentage of deduplicated Percentage of total 1 72.42940778909029 6.990625274093809 2 10.286018233982126 1.9855387813096554 3 4.042565163571042 1.1705214387609932 4 2.035054620370209 0.7856645358607617 5 1.1619391979422518 0.5607309083451375 6 0.6959504646608918 0.40302377635968234 7 0.4550996217590452 0.3074720214687387 8 0.3282458842516581 0.2534488732807277 9 0.27383441838536055 0.23786559604216947 >10 3.1840811312091106 7.904017348432069 >50 2.2647335770604347 16.1658263299361 >100 2.69794965903601 47.423878682104345 >500 0.0979382891594948 6.32968798381397 >1k 0.04503731545290637 7.144478860014226 >5k 7.148780230620058E-4 0.48215417417964224 >10k+ 0.0014297560461240116 1.855065415997977 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TGTCACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 14609 0.890470158979004 No Hit TGTCACGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 12277 0.7483265207601637 No Hit TGTCACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 6988 0.4259432863950496 No Hit TGTCACGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG 4312 0.26283163293294987 No Hit TGTCACAGGAGTCTAGAACACACAAAACTCGCAGGCAATCCCGGGGCCAGCC 3446 0.21004587362869787 No Hit TGTCACGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 3441 0.20974110596527845 No Hit TGTCACGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 3020 0.18407966870535916 No Hit TGTCACGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 2977 0.18145866679995173 No Hit TGTCACGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 2938 0.17908147902527988 No Hit TGTCACGGGGACTGTCGAGTCGCGTCCACCCGCGAGCACAGCTTCTTTGCAG 2876 0.17530235999887847 No Hit TGTCACGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 2809 0.17121847330905757 No Hit TGTCACGGGGACAGCATGCTCTCTCCCTATAGGCACGGCCTCCGCCGTGTGG 2638 0.16079541922011173 No Hit TGTCACGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 2509 0.15293241350388945 No Hit TGTCACGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 2408 0.14677610670281618 No Hit TGTCACGGGGAAGTGTTCCTGGTCTGTGTGTGTGGCTGTCCGTGTTGTCGCT 2145 0.1307453276069521 No Hit TGTCACGGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAACG 2101 0.1280633721688608 No Hit TGTCACGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 1971 0.1201394129199546 No Hit TGTCACGGCACGACGCTACTCAGACTACCCAGATGCTTACACCACATGAAAC 1971 0.1201394129199546 No Hit TGTCACGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 1957 0.11928606346238008 No Hit TGTCACGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 1949 0.11879843520090894 No Hit TGTCACGGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCTT 1938 0.1181279463413861 No Hit TGTCACGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 1641 0.10002474713426965 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 3.6572119610336256E-4 0.0 0.0 0.0 0.0 8 4.2667472878725633E-4 0.0 0.0 0.0 0.0 9 4.2667472878725633E-4 0.0 0.0 0.0 0.0 10 0.002255280709304069 0.0 0.0 0.0 0.0 11 0.0037181654937175194 0.0 0.0 0.0 0.0 12 0.0054248644088665445 0.0 0.0 0.0 0.0 13 0.008777308706480701 0.0 0.0 0.0 0.0 14 0.013897405451927778 0.0 0.0 0.0 0.0 15 0.019870851654949367 0.0 0.0 0.0 0.0 16 0.03151297639757308 0.0 0.0 0.0 0.0 17 0.03773023673133024 0.0 0.0 0.0 0.0 18 0.04358177586898404 0.0 0.0 0.0 0.0 19 0.052298131042780846 0.0 0.0 0.0 0.0 20 0.058088716647750754 0.0 0.0 0.0 0.0 21 0.0644278840468757 0.0 0.0 0.0 0.0 22 0.07064514438063287 0.0 0.0 0.0 0.0 23 0.07649668351828667 0.0 0.0 0.0 0.0 24 0.08247012972130825 0.0 0.0 0.0 0.0 25 0.08722450527065197 0.0 0.0 0.0 0.0 26 0.09167411315657621 0.0 0.0 0.0 0.0 27 0.09612372104250046 0.0 0.0 0.0 0.0 28 0.1025238419743093 0.0 0.0 0.0 0.0 29 0.10685154279486576 0.0 0.0 0.0 0.0 30 0.11221545367104842 0.0 0.0 0.0 0.002560048372723538 31 0.11812794634138611 0.0 0.0 0.0 0.002560048372723538 32 0.12471092787124663 0.0 0.0 0.0 0.002560048372723538 33 0.1287948145610675 0.0 0.0 0.0 0.002560048372723538 34 0.1338539577738307 0.0 0.0 0.0 0.002560048372723538 35 0.14226554528420804 0.0 0.0 0.0 0.002560048372723538 36 0.15543150834392908 0.0 0.0 0.0 0.002560048372723538 37 0.16396500291967422 0.0 0.0 0.0 0.002560048372723538 38 0.17164514803784484 0.0 0.0 0.0 0.002560048372723538 39 0.1776795477735503 0.0 0.0 0.0 0.002560048372723538 40 0.18353108691120412 0.0 0.0 0.0 0.002560048372723538 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTAT 145 0.0 46.000004 42 CGTATAC 140 0.0 46.000004 44 ATTACGT 40 5.6134013E-9 46.000004 24 CAATTGG 20 6.312246E-4 46.000004 40 CGATTAG 150 0.0 46.000004 30 TATGCGT 35 1.01992555E-7 46.000004 15 TAGTTCG 20 6.312246E-4 46.000004 29 TACGCTA 20 6.312246E-4 46.000004 34 CCCGTAA 35 1.01992555E-7 46.000004 41 CGTAGTA 20 6.312246E-4 46.000004 12 GCGATAA 35 1.01992555E-7 46.000004 36 ATACGCA 20 6.312246E-4 46.000004 14 TATCGTT 20 6.312246E-4 46.000004 21 CGTTTAT 20 6.312246E-4 46.000004 15 CCGTTCA 40 5.6134013E-9 46.000004 33 GTTATCG 35 1.01992555E-7 46.000004 29 GTACGTT 35 1.01992555E-7 46.000004 19 TACGTAT 20 6.312246E-4 46.000004 28 GTACGAA 20 6.312246E-4 46.000004 21 ACGGTAC 35 1.01992555E-7 46.000004 5 >>END_MODULE