##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527109_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1592820 Sequences flagged as poor quality 0 Sequence length 52 %GC 57 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.33174558330508 33.0 31.0 34.0 31.0 34.0 2 32.62233083462036 34.0 31.0 34.0 31.0 34.0 3 31.72847402719705 31.0 31.0 34.0 30.0 34.0 4 36.090949385366834 37.0 35.0 37.0 35.0 37.0 5 36.06265993646489 37.0 35.0 37.0 35.0 37.0 6 36.28289009429816 37.0 37.0 37.0 35.0 37.0 7 36.32537386522018 37.0 37.0 37.0 35.0 37.0 8 36.577732574929996 37.0 37.0 37.0 35.0 37.0 9 38.62134767268115 39.0 39.0 39.0 38.0 39.0 10 38.081965947188 39.0 38.0 39.0 37.0 39.0 11 37.654233372258005 39.0 38.0 39.0 35.0 39.0 12 36.97279479162743 39.0 35.0 39.0 34.0 39.0 13 36.7365640813149 39.0 35.0 39.0 33.0 39.0 14 37.413584083575046 40.0 36.0 40.0 33.0 40.0 15 37.57137718009568 40.0 36.0 40.0 33.0 40.0 16 37.7001305860047 40.0 36.0 40.0 33.0 40.0 17 37.6054777062066 40.0 36.0 40.0 33.0 40.0 18 37.598900064037366 40.0 36.0 40.0 33.0 40.0 19 37.55668499893271 40.0 36.0 40.0 33.0 40.0 20 37.41322246079281 40.0 36.0 40.0 33.0 40.0 21 33.19103476852375 39.0 33.0 40.0 10.0 40.0 22 33.8612228625959 39.0 33.0 40.0 16.0 40.0 23 35.875631270325584 38.0 34.0 40.0 29.0 40.0 24 36.72693964164187 38.0 35.0 40.0 31.0 40.0 25 37.03444457000791 39.0 35.0 40.0 32.0 40.0 26 37.09891952637461 39.0 35.0 40.0 33.0 40.0 27 37.02983074044776 39.0 35.0 40.0 33.0 40.0 28 36.917692520184325 39.0 35.0 40.0 32.0 40.0 29 36.846574628646046 39.0 35.0 40.0 32.0 40.0 30 36.74269283409299 39.0 35.0 40.0 32.0 40.0 31 36.59128966235984 39.0 35.0 40.0 31.0 40.0 32 36.55494406147587 38.0 35.0 40.0 31.0 40.0 33 36.203825918810665 38.0 35.0 40.0 31.0 40.0 34 35.98891149031278 38.0 35.0 40.0 30.0 40.0 35 35.85683316382266 38.0 34.0 40.0 30.0 40.0 36 35.80303110207054 38.0 34.0 40.0 30.0 40.0 37 35.72942956517372 38.0 34.0 40.0 30.0 40.0 38 35.62668411998845 37.0 34.0 40.0 30.0 40.0 39 35.436193669090045 37.0 34.0 40.0 29.0 40.0 40 30.590868396931228 35.0 29.0 39.0 8.0 40.0 41 31.383538001783002 35.0 28.0 39.0 12.0 40.0 42 33.1343924611695 35.0 30.0 39.0 23.0 40.0 43 33.989001268191004 35.0 32.0 39.0 26.0 40.0 44 34.80914541505004 36.0 33.0 39.0 28.0 40.0 45 35.09702665712384 36.0 34.0 40.0 29.0 40.0 46 35.1579023367361 35.0 34.0 40.0 30.0 40.0 47 35.108258936979695 35.0 34.0 40.0 29.0 40.0 48 34.980152182920854 35.0 34.0 40.0 29.0 40.0 49 34.84091297196168 35.0 34.0 39.0 29.0 40.0 50 34.71487424818875 35.0 34.0 39.0 29.0 40.0 51 34.56744139325222 35.0 34.0 39.0 29.0 40.0 52 34.146205472055854 35.0 33.0 38.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 3.0 14 6.0 15 41.0 16 83.0 17 195.0 18 365.0 19 671.0 20 1227.0 21 1938.0 22 3272.0 23 4794.0 24 6866.0 25 9301.0 26 12573.0 27 16348.0 28 22031.0 29 28727.0 30 38148.0 31 51706.0 32 72789.0 33 87498.0 34 156528.0 35 176458.0 36 201179.0 37 226480.0 38 345679.0 39 127912.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 0.0 100.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 99.15131653294158 0.7187252796926207 0.039552491806983836 0.0904056955588202 8 99.55569367536822 0.3065004206376113 0.05248552881053729 0.08532037518363657 9 98.0994085960749 0.8791953893095265 0.3820896272020693 0.6393063874135182 10 63.46774902374405 25.28245501688829 4.168958199922151 7.080837759445512 11 39.357554525935136 23.090116899586896 18.510503383935408 19.04182519054256 12 32.98545975063096 14.678243618236838 26.5107168418277 25.825579789304502 13 26.532313757988973 14.963021559247123 29.728908476789595 28.77575620597431 14 25.12882811617132 15.423902261398023 32.98263457264474 26.46463504978591 15 27.026657123843243 18.028779146419556 29.96195426978566 24.982609459951533 16 32.80201152672618 18.738714983488407 24.367097349355234 24.09217614043018 17 32.46481083863839 19.41273966926583 23.570648284175235 24.551801207920544 18 31.301590889114905 19.78120566040105 23.031353197473663 25.885850253010386 19 31.294119862884695 21.233472708780653 21.795557564571013 25.67684986376364 20 29.95052799437476 22.83239788551123 23.898871184440175 23.31820293567384 21 35.05882648384626 19.3076430481787 23.177257945028316 22.456272522946723 22 29.680880451023974 20.151429540061024 26.286272146256323 23.88141786265868 23 28.592182418603485 20.658768724651875 25.295450835624866 25.453598021119777 24 30.660024359312416 20.66153112090506 22.710538541705905 25.967905978076615 25 28.60919626825379 21.377054532213307 23.11485290239952 26.898896297133383 26 26.67520498235833 20.29582752602303 23.27682977360907 29.752137718009568 27 25.875428485327912 18.18190379327231 25.348564181765674 30.59410353963411 28 26.814957120076343 21.31772579450283 22.88626461244836 28.98105247297246 29 29.11471478258686 21.449379088660365 22.689129970743714 26.746776158009066 30 28.94463906781683 18.84299544204618 24.307140794314485 27.905224695822504 31 29.96929973254982 19.72463931894376 25.01136349367788 25.29469745482854 32 34.481046194799156 19.497432227119198 21.404364586080035 24.617156992001608 33 33.54647731695985 19.720746851496088 22.999146168430833 23.73362966311322 34 29.541065531572936 21.17640411345915 26.845406260594416 22.4371240943735 35 27.241684559460577 26.26335681370148 24.94801672505368 21.546941901784255 36 28.83640336007835 26.404364586080035 22.32035007094336 22.438881982898256 37 29.569066184502958 26.563390715837322 20.974246933112344 22.89329616654738 38 31.204969801986415 25.7317210984292 19.78534925478083 23.277959844803554 39 30.655817983199608 22.50134980726008 21.12661819916877 25.71621401037154 40 29.5239889001896 26.134842606195303 19.544706872088497 24.7964616215266 41 24.36031692218832 23.449919011564397 22.512022701874663 29.677741364372622 42 24.344182016800392 21.851998342562247 23.032483268668148 30.77133637196921 43 26.026167426325635 20.1851433306965 25.086576009844176 28.702113233133687 44 27.363041649401694 19.281525847239486 24.20794565613189 29.147486847226933 45 26.917479690109364 20.166873846385656 23.044349016210244 29.871297447294737 46 26.419243856807423 22.320161725744278 22.6183121758893 28.642282241559 47 25.63516279303374 22.331525219422158 25.409776371466958 26.62353561607715 48 27.501349807260077 22.655102271443102 24.43169975263997 25.411848168656846 49 29.241157192903156 21.173767280672013 23.597958338041963 25.987117188382868 50 24.9799726271644 21.974359940231793 24.246933112341633 28.798734320262177 51 24.685212390602832 22.606320864881155 25.456423199105988 27.252043545410025 52 25.093230873545036 23.016473926746272 23.836277796612297 28.054017403096392 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 3.0 6 6.0 7 3.0 8 0.0 9 36.0 10 72.0 11 195.5 12 319.0 13 1551.5 14 3609.0 15 4434.0 16 4183.5 17 3933.0 18 3705.5 19 3478.0 20 3366.0 21 3254.0 22 3579.5 23 3905.0 24 3929.5 25 3954.0 26 4165.0 27 4376.0 28 5863.5 29 7351.0 30 7423.0 31 7495.0 32 8471.0 33 9447.0 34 11287.5 35 13128.0 36 16380.0 37 19632.0 38 20441.0 39 23973.0 40 26696.0 41 28816.5 42 30937.0 43 34059.5 44 37182.0 45 39172.5 46 41163.0 47 44858.0 48 48553.0 49 52196.5 50 55840.0 51 61958.0 52 68076.0 53 77948.5 54 87821.0 55 96762.5 56 105704.0 57 124396.5 58 143089.0 59 148781.0 60 154473.0 61 156365.5 62 158258.0 63 156275.0 64 135632.0 65 116972.0 66 101904.0 67 86836.0 68 71322.0 69 55808.0 70 48406.0 71 41004.0 72 35520.5 73 30037.0 74 26193.5 75 22350.0 76 17224.5 77 12099.0 78 8225.0 79 4351.0 80 2902.5 81 1454.0 82 1093.0 83 732.0 84 485.0 85 238.0 86 131.5 87 25.0 88 14.5 89 4.0 90 4.0 91 3.0 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1592820.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.59685473836106 #Duplication Level Percentage of deduplicated Percentage of total 1 73.17341773650051 7.022346607266082 2 9.202059945802453 1.7662166518711362 3 3.740289349312543 1.0768504069437446 4 2.0045205555004535 0.7694837036478669 5 1.1526801049987292 0.5531051763735789 6 0.7776862992377829 0.44780054674791564 7 0.543691362540653 0.3652408920162972 8 0.37457064543106533 0.2875760058764864 9 0.28034132913359133 0.24213555115687294 >10 3.5328927633766725 8.695325647874249 >50 2.374196462511993 16.787159874025498 >100 2.7031153678977855 46.776888171442046 >500 0.0941904138150224 6.036111665402085 >1k 0.044105035040367634 6.855030758565279 >5k 7.47542966785892E-4 0.49457978346623377 >10k+ 0.001495085933571784 1.8241485573246194 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TGTCACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 13264 0.8327369068695772 No Hit TGTCACGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 12163 0.763614218806896 No Hit TGTCACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 6894 0.43281726748785176 No Hit TGTCACGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG 4035 0.25332429276377744 No Hit TGTCACGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 3359 0.21088384123755352 No Hit TGTCACAGGAGTCTAGAACACACAAAACTCGCAGGCAATCCCGGGGCCAGCC 3313 0.20799588151831344 No Hit TGTCACGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 3053 0.19167263093130424 No Hit TGTCACGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 2950 0.1852061124295275 No Hit TGTCACGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 2881 0.18087417285066737 No Hit TGTCACGGGGACTGTCGAGTCGCGTCCACCCGCGAGCACAGCTTCTTTGCAG 2875 0.18049748245250563 No Hit TGTCACGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 2757 0.17308923795532452 No Hit TGTCACGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 2454 0.1540663728481561 No Hit TGTCACGGGGACAGCATGCTCTCTCCCTATAGGCACGGCCTCCGCCGTGTGG 2263 0.142075061840007 No Hit TGTCACGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 2205 0.13843372132444345 No Hit TGTCACGGGGAAGTGTTCCTGGTCTGTGTGTGTGGCTGTCCGTGTTGTCGCT 2154 0.13523185294006856 No Hit TGTCACGGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAACG 2129 0.1336623096143946 No Hit TGTCACGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 1939 0.1217337803392725 No Hit TGTCACGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 1915 0.12022701874662549 No Hit TGTCACGGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCTT 1913 0.12010145528057158 No Hit TGTCACGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 1901 0.11934807448424807 No Hit TGTCACGGCACGACGCTACTCAGACTACCCAGATGCTTACACCACATGAAAC 1866 0.11715071382830453 No Hit TGTCACGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 1773 0.11131201265679738 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 1.2556346605391695E-4 0.0 0.0 0.0 0.0 8 1.2556346605391695E-4 0.0 0.0 0.0 0.0 9 1.8834519908087543E-4 0.0 0.0 0.0 0.0 10 0.0022601423889705053 0.0 0.0 0.0 0.0 11 0.004771411710048844 0.0 0.0 0.0 0.0 12 0.00659208196783064 0.0 0.0 0.0 0.0 13 0.010735676347609899 0.0 0.0 0.0 0.0 14 0.015130397659496992 0.0 0.0 0.0 0.0 15 0.02059240843284238 0.0 0.0 0.0 0.0 16 0.030825830916236613 0.0 0.0 0.0 0.0 17 0.035597242626285455 0.0 0.0 0.0 0.0 18 0.040682563001469094 0.0 0.0 0.0 0.0 19 0.047462990168380605 0.0 0.0 0.0 0.0 20 0.05411785386923821 0.0 0.0 0.0 0.0 21 0.0600193367737723 0.0 0.0 0.0 0.0 22 0.06661141874160294 0.0 0.0 0.0 0.0 23 0.072575683379164 0.0 0.0 0.0 0.0 24 0.07828882108461722 0.0 0.0 0.0 0.0 25 0.08280910586255823 0.0 0.0 0.0 0.0 26 0.08764329930563403 0.0 0.0 0.0 0.0 27 0.092226365816602 0.0 0.0 0.0 0.0 28 0.09787672178902826 0.0 0.0 0.0 0.0 29 0.10252257003302319 0.0 0.0 0.0 0.0 30 0.10773345387426074 0.0 0.0 0.0 0.002511269321078339 31 0.11256764731733655 0.0 0.0 0.0 0.002511269321078339 32 0.11853191195489761 0.0 0.0 0.0 0.002511269321078339 33 0.12380557752916212 0.0 0.0 0.0 0.002511269321078339 34 0.1292675883025075 0.0 0.0 0.0 0.002511269321078339 35 0.13661305106666163 0.0 0.0 0.0 0.002511269321078339 36 0.1486043620748107 0.0 0.0 0.0 0.002511269321078339 37 0.15701711430042314 0.0 0.0 0.0 0.002511269321078339 38 0.16505317612787385 0.0 0.0 0.0 0.002511269321078339 39 0.17151969462965055 0.0 0.0 0.0 0.002511269321078339 40 0.1791790660589395 0.0 0.0 0.0 0.002511269321078339 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATATCG 25 3.4177538E-5 46.0 21 CGTATAT 55 1.8189894E-12 46.0 41 ACGCATA 25 3.4177538E-5 46.0 11 CCGATAC 25 3.4177538E-5 46.0 16 CGTGATA 30 1.8618593E-6 46.0 32 ATTACGT 25 3.4177538E-5 46.0 24 CGATTAG 100 0.0 46.0 30 TACGGGA 20 6.312192E-4 46.0 30 TACGGAA 25 3.4177538E-5 46.0 44 GTAATCG 85 0.0 46.0 9 CGTAGTA 40 5.6134013E-9 46.0 12 CGTAGGT 30 1.8618593E-6 46.0 37 TATTCCG 25 3.4177538E-5 46.0 42 TATTAGC 85 0.0 46.0 41 CGAATAG 20 6.312192E-4 46.0 37 CGAATAA 20 6.312192E-4 46.0 35 CACGTAA 20 6.312192E-4 46.0 46 CCCGGTA 85 0.0 46.0 14 CGTCATA 20 6.312192E-4 46.0 39 TCGAATA 20 6.312192E-4 46.0 36 >>END_MODULE