##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527107_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3742302 Sequences flagged as poor quality 0 Sequence length 52 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.585648886701286 34.0 31.0 34.0 31.0 34.0 2 32.97380729828859 34.0 31.0 34.0 31.0 34.0 3 32.94220482473087 34.0 31.0 34.0 31.0 34.0 4 36.44204529725287 37.0 37.0 37.0 35.0 37.0 5 36.38754301496779 37.0 37.0 37.0 35.0 37.0 6 36.41401148277183 37.0 37.0 37.0 35.0 37.0 7 36.545948456324474 37.0 37.0 37.0 35.0 37.0 8 36.63871034459539 37.0 37.0 37.0 35.0 37.0 9 38.72828168330616 39.0 39.0 39.0 39.0 39.0 10 38.174058106480985 39.0 39.0 39.0 37.0 39.0 11 37.94130430948651 39.0 38.0 39.0 35.0 39.0 12 37.14440630392737 39.0 35.0 39.0 35.0 39.0 13 37.024233747035915 39.0 35.0 39.0 34.0 39.0 14 37.69201951098548 40.0 36.0 40.0 34.0 40.0 15 37.574468068050095 40.0 35.0 40.0 33.0 40.0 16 32.54002322634571 39.0 34.0 40.0 3.0 40.0 17 34.02897307593027 39.0 33.0 40.0 17.0 40.0 18 36.055279076889036 39.0 34.0 40.0 30.0 40.0 19 36.97815328639965 39.0 35.0 40.0 32.0 40.0 20 37.30780118761126 39.0 35.0 40.0 33.0 40.0 21 37.54780560200646 40.0 35.0 40.0 33.0 40.0 22 37.6125053509845 40.0 35.0 40.0 34.0 40.0 23 37.614085661713034 40.0 35.0 40.0 34.0 40.0 24 37.60725270167934 40.0 35.0 40.0 34.0 40.0 25 37.5734686831795 40.0 35.0 40.0 34.0 40.0 26 37.48874489552153 40.0 35.0 40.0 34.0 40.0 27 37.398627101714396 40.0 35.0 40.0 34.0 40.0 28 37.306583755132536 40.0 35.0 40.0 34.0 40.0 29 37.099382412215796 39.0 35.0 40.0 33.0 40.0 30 37.071756368139184 39.0 35.0 40.0 33.0 40.0 31 37.05570314742103 39.0 35.0 40.0 33.0 40.0 32 36.9872530330262 39.0 35.0 40.0 33.0 40.0 33 36.64843029771515 39.0 35.0 40.0 32.0 40.0 34 36.297859445870486 39.0 35.0 40.0 30.0 40.0 35 36.33508947166744 39.0 35.0 40.0 31.0 40.0 36 36.47304573495138 39.0 35.0 40.0 31.0 40.0 37 36.377637614495036 38.0 35.0 40.0 31.0 40.0 38 36.39887133641272 38.0 35.0 40.0 31.0 40.0 39 36.051755309966964 38.0 35.0 40.0 31.0 40.0 40 36.0572190592849 38.0 35.0 40.0 30.0 40.0 41 36.05660660203265 38.0 35.0 40.0 31.0 40.0 42 36.02648957780532 38.0 35.0 40.0 31.0 40.0 43 35.98018839740887 38.0 35.0 40.0 31.0 40.0 44 36.227257981851814 38.0 35.0 40.0 31.0 40.0 45 36.266536479418285 38.0 35.0 40.0 32.0 40.0 46 36.154136945655374 38.0 35.0 40.0 31.0 40.0 47 35.85997629266692 38.0 35.0 40.0 31.0 40.0 48 35.843601077625486 37.0 35.0 40.0 31.0 40.0 49 35.808454796005236 37.0 35.0 40.0 31.0 40.0 50 35.35516588452776 37.0 35.0 40.0 30.0 40.0 51 35.47161559916864 36.0 35.0 40.0 30.0 40.0 52 35.18482821536049 36.0 34.0 40.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 5.0 15 25.0 16 62.0 17 176.0 18 405.0 19 818.0 20 1536.0 21 2751.0 22 4337.0 23 6583.0 24 9817.0 25 13918.0 26 19074.0 27 25862.0 28 34810.0 29 46499.0 30 62610.0 31 84230.0 32 118460.0 33 203986.0 34 322286.0 35 392855.0 36 331229.0 37 598045.0 38 891820.0 39 570103.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 0.0 0.0 100.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 100.0 0.0 7 99.25142332179499 0.5088846383856782 0.1844052136893281 0.055286826130013025 8 99.16177262016801 0.5265475635050298 0.18314930222093245 0.1285305141060235 9 97.7341219388494 1.1654323996299603 0.409774518464838 0.6906711430557982 10 57.88736451521016 27.239089736744926 5.7137558647057345 9.159789883339185 11 40.86025125711394 17.323481643116992 21.169296331509322 20.646970768259752 12 37.57887524844334 11.978242269063266 26.399713331526957 24.04316915096644 13 27.64635243227297 12.725135491470224 27.17950074579764 32.449011330459165 14 23.857828684055963 15.434350300964486 32.959499260081095 27.748321754898452 15 28.9123913569776 18.128681223482232 30.230376917736727 22.728550501803436 16 33.74463097847261 25.822020777585564 23.023449203190978 17.409899040750854 17 32.36224655305745 18.579847377362917 25.075849036234914 23.982057033344717 18 33.047760442636644 18.780873376868033 26.829769484130356 21.341596696364963 19 32.044073407223685 24.145405688797965 22.649267750170885 21.16125315380747 20 34.117823735230346 23.003862328588127 22.589571873141185 20.288742063040345 21 32.128406526250416 23.708802763646545 24.03940141656125 20.123389293541784 22 28.003405390585794 20.369387612223704 29.695011252432323 21.93219574475817 23 32.509989840477864 19.05963227981066 26.813148698314563 21.617229181396905 24 35.66198024638311 18.33817794501887 22.785173403963658 23.214668404634367 25 29.329647901211608 18.657019128867738 22.13354240251054 29.879790567410115 26 24.779587537296564 19.237330391828344 27.29445672743675 28.688625343438346 27 22.614022064493994 17.470289677316263 26.718126971046164 33.197561287143586 28 24.22492893411595 24.65832527679487 22.30570915976316 28.811036629326015 29 31.85475143374319 22.73955976829235 21.512079997819527 23.89360880014494 30 30.916799339016464 18.954429653192072 26.398457420058563 23.730313587732898 31 34.279969922256406 18.194122227441824 24.208842578712247 23.317065271589517 32 37.3186610808 17.214992269464087 24.6687733913511 20.797573258384812 33 35.91861373026549 18.06134299155974 25.516380024915147 20.503663253259624 34 28.092975927650947 20.26958273276716 31.75264850351468 19.884792836067213 35 24.96840180188558 28.18465746484383 28.792224678820684 18.05471605444991 36 25.531157025809247 32.40676460638399 23.234869874211114 18.827208493595656 37 31.124585883234435 28.703429065853047 19.714843965024738 20.457141085887777 38 30.226422132687315 28.461973405673834 20.26677697310372 21.04482748853513 39 31.6128415077137 25.290155631480303 19.987697411913842 23.109305448892155 40 27.88262411745498 22.985344314809442 20.14797309249761 28.984058475237966 41 22.98438234006769 26.476029994372446 20.788755156585438 29.750832508974423 42 21.88436422287672 24.17554756403946 21.847087701633914 32.0930005114499 43 22.854408863849045 20.241070870282517 24.099631724003036 32.80488854186541 44 24.62473632539544 19.138487487113547 23.930698270743516 32.3060779167475 45 28.462641443688934 21.424914397608745 22.49428293066674 27.618161228035575 46 25.897161693524467 25.407329499329556 21.95918448056838 26.7363243265776 47 23.819964289359866 22.517183273824507 25.586470573459863 28.076381863355763 48 25.92572699905032 21.78824691326355 27.932753690108385 24.353272397577747 49 29.471833112346356 20.037185668072752 24.357734891518643 26.13324632806225 50 24.74100166154415 20.482847188708984 26.075661451160276 28.70048969858659 51 23.671927065212802 20.69210341656018 28.203469415349165 27.432500102877853 52 22.52669613515959 20.91474712623407 27.421864937677398 29.13669180092895 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.5 6 1.0 7 1.5 8 2.0 9 51.0 10 100.0 11 465.5 12 831.0 13 2729.5 14 5929.0 15 7230.0 16 7201.5 17 7173.0 18 8125.5 19 9078.0 20 9868.0 21 10658.0 22 10902.0 23 11146.0 24 11340.5 25 11535.0 26 14065.0 27 16595.0 28 20537.5 29 24480.0 30 25157.0 31 25834.0 32 26022.0 33 26210.0 34 29559.5 35 32909.0 36 40967.5 37 49026.0 38 52535.5 39 58659.5 40 61274.0 41 69013.0 42 76752.0 43 79385.0 44 82018.0 45 93044.0 46 104070.0 47 111065.0 48 118060.0 49 134997.0 50 151934.0 51 159620.0 52 167306.0 53 185070.0 54 202834.0 55 227436.5 56 252039.0 57 296235.5 58 340432.0 59 361737.0 60 383042.0 61 393701.0 62 404360.0 63 427799.0 64 354340.5 65 257443.0 66 202772.5 67 148102.0 68 116516.5 69 84931.0 70 70428.0 71 55925.0 72 49326.0 73 42727.0 74 37668.5 75 32610.0 76 25305.0 77 18000.0 78 12840.5 79 7681.0 80 5819.5 81 3958.0 82 2649.0 83 1340.0 84 945.0 85 550.0 86 333.0 87 116.0 88 78.0 89 28.5 90 17.0 91 13.5 92 10.0 93 11.0 94 12.0 95 6.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 3742302.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.293486153177795 #Duplication Level Percentage of deduplicated Percentage of total 1 67.68026698603167 4.9362509010599815 2 10.608777690514978 1.54749946375825 3 4.730300996711164 1.03501154459628 4 2.5059905168184042 0.7310962853763958 5 1.469858573704769 0.5360196577222698 6 0.8842830602897919 0.3869703753427968 7 0.6014252432889089 0.30705406788694706 8 0.41464206980527896 0.2419348955719826 9 0.32757912789726734 0.21502744500498994 >10 4.3848112664331795 8.734967267300796 >50 3.178738155446381 16.894846491516695 >100 2.9737398932870174 38.72443216053065 >500 0.15185054774231574 7.480004597174235 >1k 0.08267418710414967 10.975029654000302 >5k 0.002530842462371929 1.2922603340666772 >10k+ 0.002530842462371929 5.961594859090795 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CCATCTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 83746 2.2378204645162256 No Hit CCATCTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 46262 1.2361909861897837 No Hit CCATCTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 26667 0.7125827899512118 No Hit CCATCTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 14805 0.39561211254463163 No Hit CCATCTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 12183 0.3255482855205165 No Hit CCATCTGGGGGGCTGATGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 10119 0.27039506699352434 No Hit CCATCTGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 9350 0.24984621764892304 No Hit CCATCTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 8441 0.22555635541973898 No Hit CCATCTGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCT 7370 0.1969376068526805 No Hit CCATCTGGGATTGTTAATTATTCTTTTGGATTCTTTTGAACTTGTAATACTA 6173 0.16495194668949753 No Hit CCATCTGGGGGGGCTAGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 5531 0.14779673046162495 No Hit CCATCTGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCT 5140 0.13734861590539726 No Hit CCATCTGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTC 4943 0.13208447634637718 No Hit CCATCTGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACCGTCGGCTC 4854 0.12970626101260668 No Hit CCATCTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 4743 0.1267401722255446 No Hit CCATCTGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTT 4148 0.11084086746606767 No Hit CCATCTGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 4067 0.10867642429713048 No Hit CCATCTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 4039 0.10792822172021393 No Hit CCATCTGGGGGGGCTGGTGAGGTGGCTCAGTGGGTAAGAGCACCCGACTGCT 4022 0.10747395586994314 No Hit CCATCTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 4008 0.10709985458148487 No Hit CCATCTGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTC 3999 0.10685936089604742 No Hit CCATCTGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 3972 0.10613787983973502 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 8.016456181248868E-5 0.0 0.0 0.0 0.0 8 1.0688608241665157E-4 0.0 0.0 0.0 0.0 9 2.1377216483330313E-4 0.0 0.0 0.0 0.0 10 0.0028057596634371035 0.0 0.0 0.0 0.0 11 0.005691683888686696 0.0 0.0 0.0 0.0 12 0.008764658758165428 0.0 0.0 0.0 0.0 13 0.01247895012214407 0.0 0.0 0.0 0.0 14 0.02225902666326769 0.0 0.0 0.0 0.0 15 0.030008267638474927 0.0 0.0 0.0 0.0 16 0.04251393928122316 0.0 0.0 0.0 0.0 17 0.04879349662320144 0.0 0.0 0.0 0.0 18 0.05493944636215891 0.0 0.0 0.0 0.0 19 0.06629609261892813 0.0 0.0 0.0 0.0 20 0.0750340298564894 0.0 0.0 0.0 0.0 21 0.08232900498142587 0.0 0.0 0.0 0.0 22 0.08855511928219582 0.0 0.0 0.0 0.0 23 0.09446057533571582 0.0 0.0 0.0 0.0 24 0.10060652507467328 0.0 0.0 0.0 0.0 25 0.10640509504577664 0.0 0.0 0.0 0.0 26 0.11193644981083836 0.0 0.0 0.0 0.0 27 0.11875043756489989 0.0 0.0 0.0 0.0 28 0.12804952673514858 0.0 0.0 0.0 0.0 29 0.13403514735048105 0.0 0.0 0.0 0.0 30 0.13996732492460523 0.0 0.0 0.0 0.0 31 0.14640721139020849 0.0 0.0 0.0 0.0 32 0.1519385661552702 0.0 0.0 0.0 0.0 33 0.15757680700274856 0.0 0.0 0.0 0.0 34 0.1659139214312474 0.0 0.0 0.0 0.0 35 0.17967550454239128 0.0 0.0 0.0 0.0 36 0.19351725221534766 0.0 0.0 0.0 0.0 37 0.20241551857653392 0.0 0.0 0.0 0.0 38 0.20979065826328286 0.0 0.0 0.0 0.0 39 0.21705891186761517 0.0 0.0 0.0 2.6721520604162892E-5 40 0.22392634266288503 0.0 0.0 0.0 2.6721520604162892E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTAAT 20 6.313288E-4 46.000004 19 CGATAAA 25 3.418645E-5 46.0 34 TACGTAT 25 3.418645E-5 46.0 37 ACGGTAC 45 3.110472E-10 45.999996 37 CATTACG 75 0.0 42.93333 45 CATCTGG 395745 0.0 42.872658 2 CCATCTG 398710 0.0 42.852074 1 ATCTGGG 388715 0.0 42.7948 3 TCTGGGA 106815 0.0 42.77442 4 CTGGGAT 34940 0.0 42.70206 5 TCGAATA 65 0.0 42.46154 40 TCTGGGG 229640 0.0 42.37733 4 CTGGGGG 111005 0.0 42.22071 5 CTAGTGA 1590 0.0 42.09434 14 TGGGGGG 74960 0.0 41.774944 6 TGGGATT 12520 0.0 41.646168 6 CGTATAC 105 0.0 41.619045 11 TGGGATC 11285 0.0 41.618076 6 CTGGGGC 53325 0.0 41.509987 5 ACGTCTA 50 8.731149E-10 41.399998 23 >>END_MODULE