##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527106_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3635303 Sequences flagged as poor quality 0 Sequence length 52 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.55862083573226 34.0 31.0 34.0 31.0 34.0 2 32.969985170424586 34.0 31.0 34.0 31.0 34.0 3 32.91304026101813 34.0 31.0 34.0 31.0 34.0 4 36.43880991488192 37.0 37.0 37.0 35.0 37.0 5 36.40315869131129 37.0 37.0 37.0 35.0 37.0 6 36.408127740658756 37.0 37.0 37.0 35.0 37.0 7 36.54827451797003 37.0 37.0 37.0 35.0 37.0 8 36.6626289472982 37.0 37.0 37.0 35.0 37.0 9 38.676005823998715 39.0 39.0 39.0 39.0 39.0 10 38.17522528383466 39.0 39.0 39.0 37.0 39.0 11 37.88201368634196 39.0 38.0 39.0 35.0 39.0 12 37.11929679589294 39.0 35.0 39.0 35.0 39.0 13 36.936800041152004 39.0 35.0 39.0 34.0 39.0 14 37.625133860918886 40.0 36.0 40.0 33.0 40.0 15 37.685793178725405 40.0 36.0 40.0 33.0 40.0 16 37.74716963070203 40.0 35.0 40.0 34.0 40.0 17 37.548298174870155 40.0 35.0 40.0 33.0 40.0 18 37.56284661828739 40.0 35.0 40.0 33.0 40.0 19 37.55332636646794 40.0 35.0 40.0 33.0 40.0 20 37.5749688540405 40.0 35.0 40.0 33.0 40.0 21 33.38147356630245 39.0 33.0 40.0 10.0 40.0 22 34.14584946564289 39.0 34.0 40.0 17.0 40.0 23 36.20892976458909 39.0 34.0 40.0 30.0 40.0 24 37.023943258649965 39.0 35.0 40.0 32.0 40.0 25 37.31190302431462 39.0 35.0 40.0 33.0 40.0 26 37.393120463411165 39.0 35.0 40.0 34.0 40.0 27 37.38289490587167 40.0 35.0 40.0 34.0 40.0 28 37.299882568248094 40.0 35.0 40.0 34.0 40.0 29 37.26838560637174 39.0 35.0 40.0 34.0 40.0 30 37.16170701589386 39.0 35.0 40.0 33.0 40.0 31 37.04625254070981 39.0 35.0 40.0 33.0 40.0 32 37.007052782120226 39.0 35.0 40.0 33.0 40.0 33 36.69152530064206 39.0 35.0 40.0 32.0 40.0 34 36.3238277524597 39.0 35.0 40.0 30.0 40.0 35 36.358065063627436 39.0 35.0 40.0 31.0 40.0 36 36.42519509377898 39.0 35.0 40.0 31.0 40.0 37 36.542306102132336 38.0 35.0 40.0 32.0 40.0 38 36.49856256823709 38.0 35.0 40.0 32.0 40.0 39 36.36707751733487 38.0 35.0 40.0 31.0 40.0 40 31.50473784441077 36.0 31.0 40.0 9.0 40.0 41 32.43401774212494 36.0 31.0 40.0 15.0 40.0 42 34.30635218027218 36.0 32.0 40.0 24.0 40.0 43 35.2566891948209 37.0 34.0 40.0 29.0 40.0 44 35.95734908479431 38.0 35.0 40.0 31.0 40.0 45 36.17281393050318 38.0 35.0 40.0 31.0 40.0 46 36.14488778514473 38.0 35.0 40.0 31.0 40.0 47 36.09648659272693 38.0 35.0 40.0 31.0 40.0 48 35.97275000185679 37.0 35.0 40.0 31.0 40.0 49 35.87156338825127 37.0 35.0 40.0 31.0 40.0 50 35.80860577508945 37.0 35.0 40.0 31.0 40.0 51 35.67399278684611 37.0 35.0 40.0 31.0 40.0 52 35.325094496937396 36.0 34.0 40.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 0.0 14 11.0 15 21.0 16 64.0 17 186.0 18 431.0 19 910.0 20 1635.0 21 2831.0 22 4677.0 23 6987.0 24 10168.0 25 14392.0 26 19837.0 27 27004.0 28 36354.0 29 48997.0 30 67008.0 31 95806.0 32 158809.0 33 154261.0 34 331016.0 35 445374.0 36 411429.0 37 370601.0 38 843495.0 39 582998.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 0.0 0.0 100.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 100.0 0.0 7 99.2582186409221 0.5031492560592611 0.18270829144090603 0.05592381157774194 8 99.18691784426223 0.5179485726499277 0.16702871810135222 0.12810486498649493 9 97.67879046120778 1.1717867809093219 0.45443254661303334 0.6949902112698721 10 57.881282523079925 27.259708475469584 5.70940028932939 9.149608712121108 11 40.94800350892346 17.29621987493202 21.18467153907116 20.571105077073355 12 37.588943755169794 11.992948043120478 26.434110169083567 23.983998032626168 13 27.75710855463767 12.730878278922003 27.11787710680513 32.394136059635194 14 23.82005021314592 15.465093281082758 32.94459911594714 27.770257389824177 15 28.886505471483392 18.027658217210504 30.27491793668918 22.810918374616918 16 36.23233056501755 17.418245466746512 26.242599310153793 20.106824658082147 17 32.35496463430971 18.584778215185914 25.052767265892278 24.00748988461209 18 33.08978646346673 18.791225930823373 26.822220871272627 21.296766734437266 19 32.04494921056099 24.161782387877984 22.637947923460576 21.15532047810045 20 34.161691611400755 22.97838722109271 22.595448027303362 20.26447314020317 21 36.24558943229766 22.518645625962954 22.92741485372746 18.30835008801192 22 28.188104265311587 20.31979177526605 29.586722207199784 21.90538175222258 23 32.49093679398939 19.110896670786452 26.79652837741448 21.60163815780968 24 35.72612791836059 18.336958432350755 22.77625826512948 23.160655384159174 25 29.314860411910644 18.67382168694054 22.14090544859672 29.8704124525521 26 24.79091839112173 19.213171501797788 27.316540051819615 28.67937005526087 27 22.569507961234596 17.465696807116217 26.691007599641626 33.27378763200757 28 24.190748336521054 24.633022336790084 22.344354789683283 28.831874537005582 29 31.71276231994967 22.752683889073346 21.5524263039422 23.98212748703478 30 30.896681789661002 18.952587996103766 26.38583358801178 23.764896626223454 31 34.33986107898021 18.184453950606045 24.221337258544885 23.25434771186886 32 37.27240892987462 17.271517669916374 24.692687239550594 20.76338616065841 33 35.950263293046 18.141899038402027 25.41999937831867 20.487838290233302 34 28.13751701027397 20.25649581341638 31.74695479303926 19.85903238327039 35 25.02019776618345 28.186976436352072 28.70613536203172 18.086690435432757 36 25.611565253295254 32.35823808909464 23.2042831092759 18.82591354833421 37 31.000277005795667 28.733643385434448 19.713624971563583 20.552454637206306 38 30.23013487458955 28.40987394998436 20.30947626649003 21.050514908936062 39 31.42629376423368 25.326389574679194 19.948873587703694 23.298443073383428 40 28.327624960010212 27.4445073766891 18.733073969350013 25.494793693950683 41 23.044791589586893 26.45240300464638 20.83432935301404 29.668476052752684 42 21.84915535238741 24.20381464763735 21.864944957820573 32.08208504215467 43 22.878615620211026 20.312887261391964 24.045120860627023 32.763376257769984 44 24.6008654574323 19.19784953276247 23.900593705669102 32.30069130413614 45 28.444699107612216 21.428750230723544 22.477273558765255 27.64927710289899 46 25.881473978922802 25.39416934434351 21.96895279430628 26.75540388242741 47 23.608651053295972 22.534930375817368 25.597316097172644 28.25910247371402 48 25.906753852429908 21.797440268390282 27.93260974394707 24.363196135232744 49 29.47374675508479 20.068671029622564 24.368917804100512 26.088664411192138 50 24.734059306748296 20.379896806401007 26.173141551061907 28.712902335788794 51 23.755268818032498 20.686748807458414 28.16637292682343 27.391609447685656 52 22.506074459267907 20.945434259537652 27.411992893027076 29.13649838816737 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.5 6 1.0 7 0.5 8 0.0 9 59.0 10 118.0 11 418.5 12 719.0 13 2438.0 14 5432.0 15 6707.0 16 6749.5 17 6792.0 18 7842.0 19 8892.0 20 9387.0 21 9882.0 22 10427.5 23 10973.0 24 11197.5 25 11422.0 26 13681.5 27 15941.0 28 19197.0 29 22453.0 30 23546.5 31 24640.0 32 24953.0 33 25266.0 34 28446.5 35 31627.0 36 39291.0 37 46955.0 38 50298.0 39 56727.0 40 59813.0 41 66836.0 42 73859.0 43 76841.5 44 79824.0 45 90505.0 46 101186.0 47 107978.5 48 114771.0 49 130527.0 50 146283.0 51 154672.5 52 163062.0 53 180477.5 54 197893.0 55 218814.5 56 239736.0 57 282838.5 58 325941.0 59 349005.5 60 372070.0 61 378352.0 62 384634.0 63 416477.5 64 351788.5 65 255256.0 66 201232.0 67 147208.0 68 116175.0 69 85142.0 70 69841.5 71 54541.0 72 48152.5 73 41764.0 74 36784.5 75 31805.0 76 24924.5 77 18044.0 78 12911.5 79 7779.0 80 5909.0 81 4039.0 82 2738.0 83 1437.0 84 993.5 85 550.0 86 320.5 87 91.0 88 68.0 89 26.5 90 8.0 91 7.5 92 7.0 93 7.5 94 8.0 95 4.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 3635303.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.314867202444949 #Duplication Level Percentage of deduplicated Percentage of total 1 67.49203898125322 4.936953023701053 2 10.610198775285305 1.552243900655121 3 4.705700770925705 1.0326472870129304 4 2.478351508563421 0.7251524866448213 5 1.4152225190775953 0.5176082394481112 6 0.8812774000691979 0.3867856290013279 7 0.5546317596603993 0.283994036772193 8 0.41351024317290136 0.24198180125283936 9 0.30859930043623474 0.2031626611312622 >10 4.645932481288411 9.354523246536164 >50 3.314653461760264 17.579014413378797 >100 2.943373510031095 38.14638067401676 >500 0.1501856003173131 7.410989009599294 >1k 0.08147899137449538 10.643575327541631 >5k 0.0026425618824160663 1.2617650479097025 >10k+ 0.0022021349020133886 5.723223215398003 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CCATCTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 79252 2.18006587071284 No Hit CCATCTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 45393 1.2486717063199408 No Hit CCATCTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 26729 0.735261957531463 No Hit CCATCTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 14667 0.4034601792477821 No Hit CCATCTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 11607 0.31928562763544055 No Hit CCATCTGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 8811 0.24237319420141867 No Hit CCATCTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 7876 0.2166531923198699 No Hit CCATCTGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCT 7086 0.19492185383171637 No Hit CCATCTGGGATTGTTAATTATTCTTTTGGATTCTTTTGAACTTGTAATACTA 5216 0.14348185006861877 No Hit CCATCTGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCT 5144 0.14150127238362248 No Hit CCATCTGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTC 5032 0.13842037376251717 No Hit CCATCTGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACCGTCGGCTC 4788 0.13170841605225206 No Hit CCATCTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 4448 0.1223556880953252 No Hit CCATCTGGGGGGGCTGGTGAGGTGGCTCAGTGGGTAAGAGCACCCGACTGCT 4122 0.11338807246603652 No Hit CCATCTGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 4062 0.11173759106187298 No Hit CCATCTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 4000 0.11003209361090396 No Hit CCATCTGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTT 3908 0.10750135545785316 No Hit CCATCTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 3878 0.10667611475577139 No Hit CCATCTGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTC 3858 0.10612595428771687 No Hit CCATCTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 3729 0.10257741926876522 No Hit CCATCTGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 3714 0.10216479891772433 No Hit CCATCTGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 3707 0.10197224275390523 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 5.501604680545198E-5 0.0 0.0 0.0 0.0 8 1.3754011701362995E-4 0.0 0.0 0.0 0.0 9 1.9255616381908192E-4 0.0 0.0 0.0 0.0 10 0.003135914667910763 0.0 0.0 0.0 0.0 11 0.006436877476237881 0.0 0.0 0.0 0.0 12 0.009710332261162274 0.0 0.0 0.0 0.0 13 0.013588963560946639 0.0 0.0 0.0 0.0 14 0.023574376056136173 0.0 0.0 0.0 0.0 15 0.03234943552160576 0.0 0.0 0.0 0.0 16 0.044507981865610655 0.0 0.0 0.0 0.0 17 0.050449714920599464 0.0 0.0 0.0 0.0 18 0.05584128750753376 0.0 0.0 0.0 0.0 19 0.06574417593251512 0.0 0.0 0.0 0.0 20 0.07385904283631928 0.0 0.0 0.0 0.0 21 0.08032342833595989 0.0 0.0 0.0 0.0 22 0.0868978459292114 0.0 0.0 0.0 0.0 23 0.09264702282038113 0.0 2.750802340272599E-5 0.0 0.0 24 0.0994965206476599 0.0 2.750802340272599E-5 0.0 0.0 25 0.10571333393667598 0.0 2.750802340272599E-5 0.0 0.0 26 0.11179260710867843 0.0 2.750802340272599E-5 0.0 0.0 27 0.11842204074873539 0.0 2.750802340272599E-5 0.0 0.0 28 0.1287100415013549 0.0 2.750802340272599E-5 0.0 0.0 29 0.13423915420530283 0.0 2.750802340272599E-5 0.0 0.0 30 0.13924561446459896 0.0 2.750802340272599E-5 0.0 0.0 31 0.14551744380042048 0.0 2.750802340272599E-5 0.0 0.0 32 0.15151419290221477 0.0 2.750802340272599E-5 0.0 0.0 33 0.15663068525512178 0.0 2.750802340272599E-5 0.0 0.0 34 0.1644704719248987 0.0 2.750802340272599E-5 0.0 0.0 35 0.17701413059654175 0.0 2.750802340272599E-5 0.0 0.0 36 0.1901904738064475 0.0 2.750802340272599E-5 0.0 0.0 37 0.19915808943573618 0.0 2.750802340272599E-5 0.0 0.0 38 0.2063651915672504 0.0 2.750802340272599E-5 0.0 0.0 39 0.2130496412541128 0.0 2.750802340272599E-5 0.0 0.0 40 0.22017421931541883 0.0 2.750802340272599E-5 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGAAT 25 3.4186247E-5 46.0 13 CCATCTG 390065 0.0 42.547035 1 ATCTGGG 379790 0.0 42.54022 3 CATCTGG 387540 0.0 42.539375 2 TCTGGGA 103285 0.0 42.405865 4 CTGGGAT 33470 0.0 42.2686 5 CTGGGGG 108890 0.0 42.20011 5 TCTGGGG 224000 0.0 42.192677 4 TGGGGGG 73460 0.0 41.838963 6 CTGGGGC 51465 0.0 41.72311 5 TGGGATT 12040 0.0 41.47259 6 TCGAATA 50 8.731149E-10 41.4 40 TGGGATC 10930 0.0 41.265324 6 TGGGGGC 19180 0.0 41.251305 6 GAACCCG 1285 0.0 41.167316 39 TCTGGGC 35825 0.0 41.043686 4 TCTGGGT 20850 0.0 41.002876 4 CTGGGAC 18845 0.0 40.89838 5 TGGGGCT 34645 0.0 40.788567 6 CTGGGGT 28230 0.0 40.753098 5 >>END_MODULE