##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527105_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2007 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.409068261086198 31.0 30.0 31.0 28.0 33.0 2 30.82311908320877 31.0 30.0 31.0 30.0 34.0 3 29.94369706028899 31.0 30.0 31.0 28.0 33.0 4 34.970104633781766 35.0 35.0 35.0 33.0 37.0 5 35.27703039362232 35.0 35.0 37.0 35.0 37.0 6 35.01993024414549 35.0 35.0 37.0 35.0 37.0 7 35.482311908320874 35.0 35.0 37.0 35.0 37.0 8 35.36173393124066 35.0 35.0 37.0 35.0 37.0 9 35.85002491280518 37.0 35.0 39.0 31.0 39.0 10 30.135525660189337 35.0 23.0 39.0 9.0 39.0 11 26.920279023418036 28.0 20.0 37.0 12.0 39.0 12 27.241654210264077 28.0 20.0 37.0 13.0 39.0 13 29.002491280518186 32.0 22.0 37.0 15.0 39.0 14 30.258594917787743 34.0 22.0 39.0 15.0 40.0 15 31.105132037867463 35.0 24.0 40.0 16.0 40.0 16 31.858495266567015 35.0 26.0 40.0 18.0 40.0 17 31.705530642750375 34.0 27.0 39.0 18.0 40.0 18 31.39810662680618 34.0 27.0 39.0 15.0 40.0 19 31.10911808669656 33.0 25.0 39.0 18.0 40.0 20 31.491280518186347 33.0 28.0 37.0 18.0 40.0 21 31.19880418535127 33.0 26.0 38.0 15.0 40.0 22 30.426008968609864 33.0 25.0 36.0 15.0 40.0 23 30.05281514698555 33.0 25.0 35.0 15.0 40.0 24 30.192825112107624 33.0 25.0 35.0 15.0 40.0 25 30.225710014947683 33.0 25.0 37.0 15.0 40.0 26 29.13153961136024 33.0 25.0 35.0 6.0 40.0 27 29.288490284005977 33.0 25.0 35.0 9.0 40.0 28 29.689088191330345 33.0 25.0 37.0 9.0 40.0 29 28.997508719481814 33.0 25.0 35.0 9.0 40.0 30 27.244145490782262 33.0 18.0 35.0 7.0 40.0 31 27.57498754359741 33.0 18.0 35.0 8.0 40.0 32 26.575984055804685 33.0 15.0 35.0 7.0 40.0 33 26.69706028898854 33.0 15.0 35.0 6.0 40.0 34 27.04534130543099 33.0 15.0 35.0 9.0 40.0 35 27.216243148978574 33.0 18.0 35.0 9.0 40.0 36 27.10911808669656 33.0 18.0 35.0 9.0 40.0 37 27.33582461385152 33.0 18.0 35.0 9.0 40.0 38 28.022421524663677 33.0 21.0 35.0 10.0 40.0 39 26.132536123567515 33.0 15.0 35.0 6.0 40.0 40 25.61484803188839 33.0 11.0 35.0 8.0 40.0 41 25.338315894369707 33.0 10.0 35.0 6.0 40.0 42 25.27902341803687 33.0 9.0 35.0 8.0 40.0 43 25.64623816641754 33.0 10.0 35.0 8.0 40.0 44 26.900348779272544 33.0 18.0 35.0 9.0 40.0 45 25.97608370702541 33.0 15.0 35.0 8.0 40.0 46 26.360737419033384 33.0 17.0 35.0 8.0 40.0 47 27.29197807673144 33.0 20.0 35.0 9.0 40.0 48 27.1604384653712 33.0 20.0 35.0 8.0 40.0 49 25.699551569506728 31.0 15.0 35.0 8.0 40.0 50 25.886397608370704 31.0 15.0 35.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 2.0 14 16.0 15 41.0 16 59.0 17 65.0 18 48.0 19 44.0 20 42.0 21 53.0 22 39.0 23 69.0 24 88.0 25 117.0 26 82.0 27 71.0 28 53.0 29 51.0 30 71.0 31 125.0 32 217.0 33 91.0 34 109.0 35 59.0 36 65.0 37 44.0 38 114.0 39 171.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 100.0 0.0 0.0 0.0 3 0.0 0.0 100.0 0.0 4 100.0 0.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 81.21574489287494 1.345291479820628 0.04982561036372695 17.38913801694071 8 75.88440458395615 6.527154957648232 17.289486796213254 0.29895366218236175 9 67.71300448430493 3.9362232187344297 18.883906327852515 9.466865969108122 10 64.77329347284504 28.94867962132536 1.4947683109118086 4.783258594917788 11 50.32386646736422 18.883906327852515 18.385650224215247 12.406576980568012 12 42.99950174389636 29.048330842052817 23.966118584952667 3.9860488290981566 13 35.22670652715495 40.109616342800194 10.563029397110114 14.100647732934728 14 20.777279521674142 43.04932735426009 25.26158445440957 10.911808669656203 15 23.766816143497756 45.73991031390135 26.307922272047833 4.185351270553064 16 36.12356751370204 47.633283507722965 12.157448928749377 4.08570004982561 17 23.218734429496763 44.94270054808172 17.937219730941703 13.901345291479823 18 29.99501743896363 46.238166417538615 12.007972097658197 11.758844045839561 19 29.9451918285999 37.86746387643249 18.784255107125063 13.403089187842552 20 20.528151469855505 40.00996512207274 20.179372197309416 19.282511210762333 21 21.325361235675135 50.17438963627304 17.83756851021425 10.662680617837568 22 26.258096661684107 48.28101644245142 21.026407573492776 4.434479322371699 23 28.749377179870457 41.205779770802195 20.677628300946687 9.367214748380666 24 26.806178375685104 41.803687095166914 19.681116093672145 11.709018435475835 25 35.176880916791234 41.30543099152965 11.310413552566018 12.207274539113104 26 18.33582461385152 41.45490782262083 17.887394120577977 22.321873442949677 27 27.60338814150473 58.594917787742894 10.612855007473842 3.188839063278525 28 34.97757847533632 41.75386148480319 20.57797708021923 2.690582959641256 29 26.307922272047833 48.67962132536123 12.057797708021925 12.954658694569007 30 35.02740408570005 43.09915296462382 10.81215744892875 11.061285500747383 31 17.937219730941703 56.502242152466366 11.509715994020926 14.050822122571002 32 24.763328350772294 51.32037867463877 19.880418535127056 4.0358744394618835 33 29.14798206278027 41.85351270553064 19.48181365221724 9.51669157947185 34 18.734429496761333 41.4050822122571 35.72496263079223 4.135525660189337 35 27.404085700049823 41.9531639262581 27.50373692077728 3.1390134529147984 36 20.42850024912805 41.15595416043846 26.15844544095665 12.25710014947683 37 36.57199800697558 48.729446935724965 11.160936721474839 3.537618335824614 38 27.60338814150473 39.511709018435475 12.406576980568012 20.47832585949178 39 28.300946686596912 39.36223218734429 29.546586945690084 2.7902341803687096 40 20.229197807673145 56.95067264573991 18.236173393124066 4.58395615346288 41 19.48181365221724 40.50822122571002 25.809666168410562 14.200298953662182 42 21.574489287493773 48.92874937717987 19.681116093672145 9.81564524165421 43 20.62780269058296 47.43398106626806 18.98355754857997 12.954658694569007 44 30.642750373692078 54.26008968609865 11.858495266567015 3.2386646736422517 45 20.12954658694569 43.04932735426009 19.282511210762333 17.538614848031887 46 29.546586945690084 47.08520179372198 11.260587942202292 12.10762331838565 47 30.194319880418536 39.56153462879921 18.63477827603388 11.609367214748382 48 29.895366218236173 38.714499252615845 12.207274539113104 19.182859990034878 49 20.92675635276532 47.53363228699551 14.848031888390633 16.69157947184853 50 20.62780269058296 36.87095166915795 12.556053811659194 29.9451918285999 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 2.0 12 4.0 13 4.0 14 4.0 15 48.0 16 92.0 17 140.5 18 189.0 19 195.5 20 202.0 21 144.0 22 86.0 23 81.0 24 76.0 25 56.5 26 37.0 27 34.5 28 32.0 29 43.5 30 55.0 31 45.0 32 35.0 33 37.0 34 39.0 35 48.5 36 58.0 37 38.0 38 18.0 39 92.0 40 166.0 41 93.5 42 21.0 43 17.5 44 14.0 45 22.5 46 31.0 47 26.0 48 21.0 49 16.5 50 12.0 51 13.0 52 14.0 53 16.0 54 18.0 55 111.5 56 205.0 57 120.0 58 35.0 59 27.5 60 20.0 61 22.0 62 24.0 63 17.0 64 10.0 65 11.0 66 12.0 67 13.5 68 15.0 69 25.0 70 35.0 71 50.0 72 65.0 73 53.0 74 41.0 75 24.5 76 8.0 77 7.0 78 6.0 79 4.5 80 3.0 81 1.5 82 0.0 83 0.5 84 1.0 85 2.0 86 3.0 87 3.0 88 3.0 89 3.5 90 4.0 91 2.5 92 1.0 93 1.5 94 2.0 95 9.0 96 16.0 97 145.0 98 274.0 99 137.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2007.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.97757847533632 #Duplication Level Percentage of deduplicated Percentage of total 1 85.75498575498575 29.99501743896363 2 6.695156695156696 4.683607374190333 3 1.7094017094017095 1.7937219730941705 4 1.1396011396011396 1.5944195316392624 5 0.5698005698005698 0.9965122072745392 6 0.14245014245014245 0.29895366218236175 7 0.7122507122507122 1.7438963627304436 8 0.14245014245014245 0.3986048829098156 9 0.2849002849002849 0.8968609865470852 >10 1.8518518518518516 15.794718485301445 >50 0.4273504273504274 10.114598903836573 >100 0.5698005698005698 31.689088191330345 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAGGAC 177 8.819133034379671 No Hit CGTGGCGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 163 8.121574489287493 No Hit CGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 159 7.922272047832586 No Hit CGTGGCCTTGCTATTGACTCTACTGTAGACATTTTTACTTTTTATGTCCC 137 6.826108619830593 No Hit CGTGGCGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 89 4.434479322371699 No Hit CGTGGCGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 58 2.8898854010961634 No Hit CGTGGCGGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 56 2.7902341803687096 No Hit CGTGGCGGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 50 2.4912805181863478 No Hit CGTGGCGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 50 2.4912805181863478 No Hit CGTGGCGAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 39 1.9431988041853512 No Hit CGTGGCGGCAGTCCAGTGCCCGTGGCGGGGAGCTGTGGGATCAAACCCCC 25 1.2456402590931739 No Hit CGTGGCGGCAGTCCAGTGCCCGTGGCGGGGAGCTGTGGGATCAACCCCCC 25 1.2456402590931739 No Hit CGTGGCGGGGGGGGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 19 0.9466865969108121 No Hit CGTGGCGGGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18 0.8968609865470852 No Hit CGTGGCGGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17 0.8470353761833582 No Hit CGTGGCGGGACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17 0.8470353761833582 No Hit CGTGGCGGCGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15 0.7473841554559043 No Hit CGTGGCGGCAGTCCAGTGCCCGTGGCGGGGAGCTGTGGGATCAACCCCTC 15 0.7473841554559043 No Hit CGTGGCGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGG 15 0.7473841554559043 No Hit CGTGGCGGGGGGGCGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 12 0.5979073243647235 No Hit CGTGGCGAGCTCTGTTTTGTGATTGAAGCCGATCAGATTACCTTTGAAAC 9 0.4484304932735426 No Hit CGTGGCGGGGGGTTGCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 9 0.4484304932735426 No Hit CGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGG 8 0.3986048829098156 No Hit CGTGGCGGCAGTCCAGTGCCCGTGGCGGGGAGCTGTGGGATCAAACCCTC 7 0.3487792725460887 No Hit CGTGGCGGGGGCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7 0.3487792725460887 No Hit CGTGGCGGGAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 7 0.3487792725460887 No Hit CGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGG 7 0.3487792725460887 No Hit CGTGGCGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGG 7 0.3487792725460887 No Hit CGTGGCGAGAGAAGTCCTGGGTTCAAATCCCAGCAACCACATGGTGAGTC 6 0.29895366218236175 No Hit CGTGGCGGGGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 5 0.2491280518186348 No Hit CGTGGCACGGGCCATGGCAATAAAGGGTTGTTCGAGGGTGTCTTCCAGGG 5 0.2491280518186348 No Hit CGTGGCGGCAGTCCAGTGCCCGTGGCGGGGAGCTGTGGGATTAAACCCCC 5 0.2491280518186348 No Hit CGTGGCGGGGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5 0.2491280518186348 No Hit CGTGGCGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGG 4 0.1993024414549078 No Hit CGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGG 4 0.1993024414549078 No Hit CGTGGCGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 4 0.1993024414549078 Illumina Single End Adapter 2 (97% over 34bp) CGTGGCGGCAGTCCAGTGCCCGTGGCGGGGAGGTGTGGGATCAAACCCCC 4 0.1993024414549078 No Hit CGTGGCGGGGGGGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4 0.1993024414549078 No Hit CGTGGCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4 0.1993024414549078 No Hit CGTGGCGGCAGTCCAGTGCCCGTGGCGGGGAGCTGTGGGATTAACCCCCC 4 0.1993024414549078 No Hit CGTGGCGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGCGGGGGGGGG 4 0.1993024414549078 No Hit CGTGGCGGCAGTCCAGTGCCCGTGGCGGGGAGGTGTGGGATCAACCCCCC 3 0.14947683109118087 No Hit CGTGGCGGGGGGGGGGGGGGGGGGGCGGCGGGGGGGGGGGGGGGGGGGGG 3 0.14947683109118087 No Hit CGTGGCGAGAAGCAGTGGTAGAGACGGGGCTTCACTATGTTGGCCAGGCT 3 0.14947683109118087 No Hit CGTGGCGGCAGTCCAGTGCCCGTGGCGGGGAGCTGGGGGATCAACCCCCC 3 0.14947683109118087 No Hit CGTGGCGGCAGTCCAGTGCCCGTGGCGGGGAGCTGTGGTATCAACCCCCC 3 0.14947683109118087 No Hit CGTGGCGGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAAAA 3 0.14947683109118087 No Hit CGTGGCGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGGATCGGAAGAG 3 0.14947683109118087 Illumina Single End Adapter 2 (97% over 34bp) CGTGGCGAGGCTAAGCAATGCACTCTGATACCTGTTTCGGTCAGTTGTTC 3 0.14947683109118087 No Hit CGTGGCGGGGGGCTCGTGGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAA 3 0.14947683109118087 No Hit CGTGGCGGCAGTCCAGTGCCCGTGGCGGGAAGCTGTGGGATCAAACCCCC 3 0.14947683109118087 No Hit CGTGGCGGGGCTCATCGTCTCTTTCCGCTGCCATGAAAGGAGTGCTTTTT 3 0.14947683109118087 No Hit CGTGGCCTTGCTATTGACTCTACTGTAGACATTTTTACTTTTTATGTCGC 3 0.14947683109118087 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.04982561036372696 0.0 0.0 0.0 0.0 8 0.09965122072745392 0.0 0.0 0.0 0.0 9 0.09965122072745392 0.0 0.0 0.0 0.0 10 0.09965122072745392 0.0 0.0 0.0 0.0 11 0.09965122072745392 0.0 0.0 0.0 0.0 12 0.09965122072745392 0.0 0.0 0.0 0.0 13 0.09965122072745392 0.0 0.0 0.0 0.0 14 0.14947683109118087 0.0 0.0 0.0 0.0 15 0.14947683109118087 0.0 0.0 0.0 0.0 16 0.14947683109118087 0.0 0.0 0.0 0.0 17 0.14947683109118087 0.0 0.0 0.0 0.0 18 0.19930244145490783 0.0 0.0 0.0 0.0 19 0.19930244145490783 0.0 0.0 0.0 0.0 20 0.2491280518186348 0.0 0.0 0.0 0.0 21 0.2491280518186348 0.0 0.0 0.0 0.0 22 0.29895366218236175 0.0 0.0 0.0 0.0 23 0.29895366218236175 0.0 0.0 0.0 0.0 24 0.29895366218236175 0.0 0.0 0.0 0.0 25 0.29895366218236175 0.0 0.0 0.0 0.0 26 0.39860488290981566 0.0 0.0 0.0 0.0 27 0.4982561036372696 0.0 0.0 0.0 0.0 28 0.5480817140009965 0.0 0.0 0.0 0.0 29 0.5480817140009965 0.0 0.0 0.0 0.0 30 0.5480817140009965 0.0 0.0 0.0 0.0 31 0.5480817140009965 0.0 0.0 0.0 0.0 32 0.5979073243647235 0.0 0.0 0.0 0.0 33 0.5979073243647235 0.0 0.0 0.0 0.0 34 0.5979073243647235 0.0 0.0 0.0 0.0 35 0.5979073243647235 0.0 0.0 0.0 0.0 36 0.5979073243647235 0.0 0.0 0.0 0.0 37 0.5979073243647235 0.0 0.0 0.0 0.0 38 0.5979073243647235 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTAGACA 20 6.117847E-4 44.000004 25 ACTGTAG 20 6.117847E-4 44.000004 22 GCCTTGC 20 6.117847E-4 44.000004 5 TTACTTT 20 6.117847E-4 44.000004 35 TGACTCT 20 6.117847E-4 44.000004 15 TATGTCC 20 6.117847E-4 44.000004 43 TTTTTAT 20 6.117847E-4 44.000004 39 TTTTTAC 20 6.117847E-4 44.000004 32 CATTTTT 20 6.117847E-4 44.000004 30 CCTTGCT 20 6.117847E-4 44.000004 6 ACTCTAC 20 6.117847E-4 44.000004 17 TCTACTG 20 6.117847E-4 44.000004 19 ACATTTT 20 6.117847E-4 44.000004 29 TATTGAC 20 6.117847E-4 44.000004 12 TTTTATG 20 6.117847E-4 44.000004 40 GCTATTG 20 6.117847E-4 44.000004 10 CTCTACT 20 6.117847E-4 44.000004 18 GACATTT 20 6.117847E-4 44.000004 28 TTTTACT 20 6.117847E-4 44.000004 33 GGCCTTG 20 6.117847E-4 44.000004 4 >>END_MODULE