##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527102_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1909366 Sequences flagged as poor quality 0 Sequence length 50 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.42419001909534 33.0 31.0 34.0 31.0 34.0 2 32.878778610282154 34.0 31.0 34.0 31.0 34.0 3 33.01727536784461 34.0 31.0 34.0 31.0 34.0 4 36.49815907479237 37.0 37.0 37.0 35.0 37.0 5 36.44594750299314 37.0 37.0 37.0 35.0 37.0 6 36.402818527196985 37.0 37.0 37.0 35.0 37.0 7 36.54207469914097 37.0 37.0 37.0 35.0 37.0 8 36.6727206832006 37.0 37.0 37.0 35.0 37.0 9 38.755161137257076 39.0 39.0 39.0 39.0 39.0 10 38.24765498076325 39.0 39.0 39.0 37.0 39.0 11 37.94505034655482 39.0 38.0 39.0 35.0 39.0 12 37.38820634702828 39.0 37.0 39.0 35.0 39.0 13 37.24155819261472 39.0 37.0 39.0 35.0 39.0 14 38.009212482049016 40.0 38.0 40.0 34.0 40.0 15 38.01001117648476 40.0 38.0 40.0 34.0 40.0 16 37.87495587540576 40.0 37.0 40.0 34.0 40.0 17 37.85391119355849 40.0 37.0 40.0 33.0 40.0 18 37.862646553882286 40.0 37.0 40.0 34.0 40.0 19 37.83055736825732 40.0 37.0 40.0 34.0 40.0 20 37.6228203497915 40.0 37.0 40.0 33.0 40.0 21 37.83838404999356 40.0 37.0 40.0 34.0 40.0 22 37.677547939996835 40.0 37.0 40.0 34.0 40.0 23 37.766611534928344 40.0 37.0 40.0 34.0 40.0 24 37.826016593989834 40.0 37.0 40.0 34.0 40.0 25 37.785847239345415 40.0 37.0 40.0 34.0 40.0 26 37.671647552119396 40.0 36.0 40.0 34.0 40.0 27 37.52358269708375 40.0 36.0 40.0 34.0 40.0 28 37.388655187114466 40.0 36.0 40.0 33.0 40.0 29 37.5725958250016 40.0 36.0 40.0 34.0 40.0 30 37.58413892360082 40.0 36.0 40.0 34.0 40.0 31 37.546546864247084 40.0 36.0 40.0 34.0 40.0 32 36.86864069015579 40.0 35.0 40.0 32.0 40.0 33 37.09835254215274 40.0 35.0 40.0 33.0 40.0 34 36.9887067225456 40.0 35.0 40.0 32.0 40.0 35 37.00278574144507 40.0 35.0 40.0 32.0 40.0 36 36.91384312908054 40.0 35.0 40.0 32.0 40.0 37 36.92575179405101 40.0 35.0 40.0 32.0 40.0 38 36.749018260511605 40.0 35.0 40.0 32.0 40.0 39 36.764953916640394 39.0 35.0 40.0 32.0 40.0 40 36.645608018577896 39.0 35.0 40.0 32.0 40.0 41 36.52385294385676 39.0 35.0 40.0 31.0 40.0 42 36.39709620889866 39.0 35.0 40.0 31.0 40.0 43 36.33435758256929 39.0 35.0 40.0 31.0 40.0 44 36.19348778599807 39.0 35.0 40.0 31.0 40.0 45 36.08311607098901 39.0 35.0 40.0 30.0 40.0 46 35.7679067292494 38.0 35.0 40.0 30.0 40.0 47 35.69882096989262 38.0 35.0 40.0 29.0 40.0 48 35.60857530719621 38.0 35.0 40.0 29.0 40.0 49 35.343189833693486 38.0 35.0 40.0 28.0 40.0 50 34.99785740397598 37.0 34.0 40.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 5.0 13 5.0 14 6.0 15 24.0 16 38.0 17 99.0 18 237.0 19 460.0 20 791.0 21 1348.0 22 2136.0 23 3148.0 24 4606.0 25 6280.0 26 8828.0 27 12099.0 28 16065.0 29 21458.0 30 29395.0 31 38808.0 32 48607.0 33 65366.0 34 129249.0 35 160837.0 36 140476.0 37 247841.0 38 582244.0 39 388908.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 100.0 0.0 7 99.26389178397437 0.46303327910940073 0.2144167226189217 0.05865821429731125 8 99.33134873041627 0.4313473687077281 0.1727274917433326 0.06457640913266498 9 97.83016980505572 1.0948136711348164 0.46135733012947755 0.6136591936799964 10 56.01126237714509 27.61146893785686 9.28313377320011 7.094134911797948 11 36.8988449569124 23.16187676956644 22.046218482993833 17.893059790527328 12 35.54075017571277 15.559038968956187 26.09541596529948 22.80479489003156 13 26.200634137195276 15.773508064980732 29.365087678318353 28.660770119505635 14 24.515519811288144 17.167635749248703 34.04119482592651 24.27564961353664 15 26.322821292512806 19.295200605855555 29.475281323748305 24.90669677788334 16 30.445132049067595 19.067638158425364 29.01868997353048 21.468539818976563 17 29.904324262608633 19.33542338137371 25.235863632221378 25.524388723796278 18 29.39080302047905 19.229681475421685 27.12272031658676 24.256795187512502 19 27.142988824562707 22.112051853861438 24.693170403160003 26.051788918415852 20 27.898160960234968 22.275509252809574 26.588930566481228 23.23739922047423 21 28.47489690295103 21.88558924794932 27.00440879328531 22.63510505581434 22 28.086286233231345 18.821745019027258 29.90291018065683 23.189058567084572 23 30.376103900457007 18.92251145144514 27.318020746153437 23.383363901944413 24 30.95137338781564 19.508255619928292 24.72092830813998 24.81944268411609 25 27.38254478188048 19.9585621614714 25.480447436478915 27.178445620169207 26 26.466691037758082 19.9847488642827 26.52100225938872 27.027557838570498 27 26.38959738468162 18.657187778561052 25.798877742664317 29.154337094093012 28 26.93061466476307 21.935658223724523 24.719566599593794 26.414160511918617 29 29.947532322247277 21.280047932140825 24.1837866600746 24.588633085537293 30 27.235794499325955 20.295166039407846 27.57297448472425 24.89606497654195 31 30.448536320433067 20.213411153230968 24.732083843537595 24.605968682798373 32 32.17989636350496 19.808407607551406 25.244086256904126 22.767609772039517 33 33.27271984522611 19.43833712342212 25.024484567128564 22.264458464223203 34 27.608169413302637 21.808338474655987 29.245676313498826 21.337815798542554 35 25.5909553223426 25.283732924960432 28.940286985313453 20.18502476738352 36 26.275842347669332 27.27664575571158 24.655461551111728 21.79205034550736 37 28.428860679408768 25.73545354845535 23.63737491921402 22.19831085292186 38 28.166469917239546 26.92134457196787 22.78782590660984 22.12435960418275 39 29.85745006457641 23.212678973020363 22.60404762628014 24.32582333612309 40 26.61516964269815 23.222053812626807 23.095991025293213 27.066785519381824 41 24.478806053946702 24.86045106071858 23.0264391426264 27.634303742708312 42 23.113955103421763 22.675432578143738 24.729255679633972 29.48135663880052 43 24.43041302715142 20.698703129729974 25.22303214784384 29.647851695274767 44 25.241205719594884 20.51571045048461 25.158246245088684 29.084837584831824 45 27.611992671913082 21.839972011652034 23.922181498989715 26.62585381744516 46 26.82696769503594 24.358556714637214 23.648530454611635 25.165945135715205 47 25.05035702950613 22.34757505894627 26.121550294705152 26.480517616842448 48 25.568068144085526 22.244556570086615 27.312469165157438 24.87490612067042 49 28.392146922067322 21.358974654414084 25.685908306736373 24.56297011678222 50 24.706473248188143 21.167497483457858 26.86059142144565 27.26543784690835 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.5 6 1.0 7 44.5 8 88.0 9 338.0 10 588.0 11 2019.5 12 3451.0 13 4733.5 14 6016.0 15 6200.0 16 6384.0 17 6533.5 18 6683.0 19 7467.0 20 8251.0 21 8211.0 22 8171.0 23 8805.0 24 9439.0 25 10002.5 26 10566.0 27 12227.0 28 13888.0 29 15437.0 30 16986.0 31 19126.5 32 21267.0 33 26112.0 34 30957.0 35 33135.0 36 35313.0 37 39505.5 38 43698.0 39 45923.5 40 48149.0 41 51545.0 42 54941.0 43 62376.0 44 69811.0 45 72738.0 46 75665.0 47 79209.0 48 82753.0 49 88394.0 50 94035.0 51 101413.0 52 108791.0 53 119956.0 54 131121.0 55 145624.0 56 160127.0 57 169518.0 58 178909.0 59 178453.0 60 177997.0 61 182646.0 62 187295.0 63 149314.0 64 111333.0 65 89171.0 66 67009.0 67 57112.5 68 47216.0 69 40162.0 70 33108.0 71 28516.5 72 23925.0 73 23514.5 74 23104.0 75 15653.5 76 8203.0 77 5502.0 78 2801.0 79 1799.5 80 798.0 81 563.5 82 329.0 83 234.0 84 139.0 85 97.5 86 56.0 87 29.0 88 2.0 89 1.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1909366.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.479280288532582 #Duplication Level Percentage of deduplicated Percentage of total 1 65.89812135375358 4.928705200924572 2 10.860847236106977 1.6246264129955699 3 4.865468817483681 1.0917061506322685 4 2.5929499236116027 0.7757359701128129 5 1.54713012149082 0.5785709910730654 6 0.9635595434615535 0.4324039140143671 7 0.6512093132499671 0.3409403886209523 8 0.47141587579662864 0.2820681174037639 9 0.371033067001797 0.2497554273978296 >10 4.797076604260549 9.64157122655585 >50 3.5216914931377117 19.131511687649517 >100 3.2692536030208386 44.43290935236132 >500 0.13390183736634143 6.6321581482178065 >1k 0.054146098169995986 7.081843294469133 >5k 7.317040293242701E-4 0.327700457071065 >10k+ 0.0014634080586485403 2.4477932605000996 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source ATCTCTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 29563 1.5483149904209041 No Hit ATCTCTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 15165 0.794242696266719 No Hit ATCTCTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 5988 0.3136119528681248 No Hit ATCTCTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 4976 0.2606100663780543 No Hit ATCTCTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 4334 0.22698633996834552 No Hit ATCTCTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 3965 0.2076605532936064 No Hit ATCTCTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 3387 0.17738872484374396 No Hit ATCTCTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 3342 0.17503192159072697 No Hit ATCTCTGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC 3330 0.17440344072325578 No Hit ATCTCTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 3122 0.1635097723537551 No Hit ATCTCTGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTC 2979 0.15602037534972343 No Hit ATCTCTGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 2943 0.15413493274730983 No Hit ATCTCTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 2770 0.14507433357460015 No Hit ATCTCTGGGGAGAGCAGCGCCTTGGAGGTCCCGTGGATCTGTGTCTTGCT 2720 0.14245566329347017 No Hit ATCTCTGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTT 2646 0.13858003127739785 No Hit ATCTCTGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCC 2629 0.13768968338181364 No Hit ATCTCTGGGGCTCTTCCGGTCTCTTTGGCCTCGCCGGTAGAAGCAAGATG 2445 0.12805297674725538 No Hit ATCTCTGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCAT 2313 0.12113968720507226 No Hit ATCTCTGGGGCTCTCAGCTCCTGAAGGCAAATCCCAATTCCAGAGCAAGG 2270 0.1188876307633005 No Hit ATCTCTGGGTGATCCAGTTGTAAAGGAAAACCATGTGAGACCGAGGATCA 2234 0.11700218816088691 No Hit ATCTCTGGGATGGTGCCTCCGTTTTCCCTTCCTAGTGACCCCAGGTTTAG 2074 0.10862244326127102 No Hit ATCTCTGGGGCTCTTTCCTTTTGCGGCCATCGGTGGATCGCAGCCGCCAA 1947 0.10197102074720091 No Hit ATCTCTGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTT 1914 0.10024269836165513 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 2.0949362249039733E-4 0.0 0.0 0.0 0.0 9 3.14240433735596E-4 0.0 0.0 0.0 0.0 10 0.004818353317279139 0.0 0.0 0.0 0.0 11 0.009270092795200082 0.0 0.0 0.0 0.0 12 0.01424556632934702 0.0 0.0 0.0 0.0 13 0.021315976088397928 0.0 0.0 0.0 0.0 14 0.03315236575910538 0.0 0.0 0.0 0.0 15 0.043731793694870444 0.0 0.0 0.0 0.0 16 0.059181948353537246 0.0 0.0 0.0 0.0 17 0.06599049108447516 0.0 0.0 0.0 0.0 18 0.07190868591982888 0.0 0.0 0.0 0.0 19 0.08955852361464486 0.0 0.0 0.0 0.0 20 0.09652418656245057 0.0 0.0 0.0 0.0 21 0.10485155805644386 0.0 0.0 0.0 0.0 22 0.1106126326749298 0.0 0.0 0.0 0.0 23 0.11663557432152871 0.0 0.0 0.0 0.0 24 0.1255390532773706 0.0 0.0 0.0 0.0 25 0.13056690021714015 0.0 0.0 0.0 0.0 26 0.13821341743803964 0.0 0.0 0.0 0.0 27 0.14528382719709054 0.0 0.0 0.0 0.0 28 0.15575850832161042 0.0 0.0 0.0 0.0 29 0.15994838077141837 0.0 0.0 0.0 0.0 30 0.16921847356661845 0.0 0.0 0.0 0.0 31 0.17696973759876314 0.0 0.0 0.0 0.0 32 0.18252131859475867 0.0 0.0 0.0 0.0 33 0.18959172835380958 0.0 0.0 0.0 0.0 34 0.1972382455747091 0.0 0.0 0.0 0.0 35 0.20991260973537812 0.0 0.0 0.0 0.0 36 0.22494377714906413 0.0 0.0 0.0 0.0 37 0.2344233635667546 0.0 0.0 0.0 0.0 38 0.2432220957113513 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGATT 20 7.85779E-4 44.000004 38 TAACGTG 20 7.85779E-4 44.000004 26 TTATCGC 20 7.85779E-4 44.000004 44 ACGGGTA 20 7.85779E-4 44.000004 43 TAGTTCG 20 7.85779E-4 44.000004 10 CGTACGG 20 7.85779E-4 44.000004 23 TCGTACG 20 7.85779E-4 44.000004 36 CATAACG 20 7.85779E-4 44.000004 34 ATTGCGA 20 7.85779E-4 44.000004 10 TACGTAA 20 7.85779E-4 44.000004 25 ATTTCGG 20 7.85779E-4 44.000004 41 CCGATAT 30 2.5286008E-6 44.0 31 CGTTACG 25 4.4439497E-5 44.0 44 CGTTAAT 45 4.802132E-10 44.0 32 TACGAAC 25 4.4439497E-5 44.0 43 AACGCGT 25 4.4439497E-5 44.0 21 TCCCGTA 30 2.5286008E-6 44.0 26 CGCGTTA 25 4.4439497E-5 44.0 23 GCGCTAA 25 4.4439497E-5 44.0 33 CGTCATA 45 4.802132E-10 44.0 12 >>END_MODULE