##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527098_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1322481 Sequences flagged as poor quality 0 Sequence length 52 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.724749164638283 31.0 30.0 31.0 30.0 31.0 2 30.895389801441382 31.0 30.0 31.0 30.0 31.0 3 30.92113383859579 31.0 30.0 31.0 30.0 31.0 4 35.16008547570816 35.0 35.0 35.0 35.0 37.0 5 35.10509186899471 35.0 35.0 35.0 35.0 37.0 6 35.15661548256648 35.0 35.0 35.0 35.0 37.0 7 35.197080336125815 35.0 35.0 35.0 35.0 37.0 8 35.08234220378213 35.0 35.0 35.0 35.0 37.0 9 36.595911774913965 37.0 35.0 39.0 35.0 39.0 10 32.28624002915732 35.0 30.0 37.0 25.0 39.0 11 29.796477983426605 32.0 26.0 35.0 20.0 37.0 12 29.199862228644495 32.0 25.0 35.0 18.0 37.0 13 29.259454011059518 32.0 25.0 35.0 18.0 37.0 14 29.719057589485217 31.0 26.0 35.0 20.0 38.0 15 29.50356564668982 31.0 26.0 35.0 19.0 38.0 16 26.25872810270998 28.0 22.0 33.0 9.0 37.0 17 26.912694397877928 29.0 22.0 33.0 12.0 37.0 18 27.430399378138514 29.0 23.0 33.0 14.0 37.0 19 27.998483910165817 29.0 23.0 34.0 18.0 37.0 20 28.18835431284079 29.0 23.0 34.0 18.0 37.0 21 28.080086594816862 29.0 23.0 34.0 18.0 37.0 22 28.214410641816404 29.0 23.0 34.0 18.0 37.0 23 28.313139470434734 30.0 24.0 34.0 18.0 37.0 24 28.04486264831026 29.0 23.0 34.0 18.0 36.0 25 28.098228254318965 29.0 23.0 33.0 18.0 36.0 26 27.150488362403696 29.0 22.0 33.0 15.0 36.0 27 26.996697873164152 29.0 22.0 33.0 14.0 36.0 28 26.639261358008167 28.0 22.0 33.0 13.0 36.0 29 26.325581237083934 28.0 22.0 33.0 12.0 35.0 30 25.854027392454032 28.0 21.0 32.0 11.0 35.0 31 25.65901513896986 28.0 21.0 32.0 11.0 35.0 32 25.516301557451488 28.0 21.0 32.0 10.0 35.0 33 25.00605226086424 26.0 20.0 32.0 9.0 34.0 34 24.98105001130451 26.0 20.0 31.0 9.0 34.0 35 24.917548153810905 26.0 20.0 31.0 9.0 34.0 36 24.62094653911852 26.0 20.0 31.0 9.0 34.0 37 24.369721757817313 26.0 18.0 31.0 9.0 34.0 38 24.2599795384584 26.0 18.0 31.0 9.0 34.0 39 23.909188109318773 26.0 18.0 31.0 8.0 34.0 40 23.902664008027337 26.0 18.0 31.0 8.0 34.0 41 23.744950589082187 26.0 18.0 31.0 8.0 34.0 42 23.597175309134876 26.0 18.0 31.0 8.0 34.0 43 23.652324683681655 26.0 18.0 31.0 8.0 34.0 44 24.919972385236537 26.0 20.0 31.0 10.0 34.0 45 25.613941523545517 28.0 20.0 32.0 11.0 34.0 46 25.965666803530638 29.0 22.0 32.0 12.0 34.0 47 25.771214860553762 29.0 21.0 32.0 10.0 34.0 48 25.939651306899684 29.0 22.0 32.0 11.0 34.0 49 26.013121549572357 29.0 22.0 32.0 11.0 34.0 50 25.694090123033902 29.0 20.0 32.0 10.0 34.0 51 25.854363881220223 29.0 21.0 32.0 10.0 34.0 52 25.463695130591667 28.0 20.0 32.0 10.0 34.0 >>END_MODULE >>Per sequence quality scores warn #Quality Count 12 11.0 13 44.0 14 166.0 15 481.0 16 1402.0 17 3494.0 18 7153.0 19 13423.0 20 23189.0 21 37230.0 22 54982.0 23 74209.0 24 96100.0 25 116985.0 26 134299.0 27 143545.0 28 139810.0 29 121566.0 30 97408.0 31 74227.0 32 56599.0 33 42172.0 34 28647.0 35 20096.0 36 11642.0 37 10417.0 38 11177.0 39 2007.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 0.0 100.0 0.0 3 100.0 0.0 0.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 100.0 0.0 0.0 0.0 7 98.36700867536094 1.3669761607161086 0.12446303576384085 0.1415521281591191 8 98.04042553352373 1.473140256835448 0.2685104738744829 0.21792373576633617 9 91.53379141174807 6.317595489084531 0.45543187387947354 1.6931812252879246 10 38.63783298209955 41.118095458460274 9.10992294029177 11.134148619148403 11 31.140182732303906 24.052519469088782 26.795545644890172 18.011752153717143 12 20.06592155199205 12.789824579710407 33.77954012193748 33.36471374636006 13 21.867006028820075 26.287334184763335 30.390909207769333 21.454750578647257 14 29.568742386469065 27.486292808743567 19.599827899228796 23.345136905558565 15 30.285803727993066 25.303199062973302 20.70192312781809 23.709074081215533 16 31.429260609415184 32.205906927963426 20.309176464539 16.05565599808239 17 29.262575416962513 27.444326232286137 22.223306043716317 21.069792307035033 18 24.49547479321064 27.639036023958003 24.87060305592292 22.99488612690844 19 26.79131117951789 27.477218954374393 24.40360201772275 21.32786784838497 20 26.65830359755641 26.91259836625252 25.64762745173655 20.781470584454524 21 25.06130522858173 26.0058178529597 26.888930729439593 22.043946189018975 22 26.021923944464987 24.930641725665623 25.710766355055387 23.336667974814006 23 22.5152573080445 26.5404947216633 28.04274692793318 22.901501042359023 24 22.416352295420502 28.51655335691023 26.38714658282425 22.679947764845014 25 24.457969528484718 31.323852667826607 24.81071561708637 19.407462186602302 26 23.498636275303767 30.742445449121764 23.66378042482274 22.09513785075173 27 23.515725367699044 26.87494187062045 25.64407352544195 23.965259236238552 28 24.174335963994945 26.912220288987136 25.46546982527537 23.447973921742545 29 24.63740499863514 26.132549352315838 25.428569484174062 23.801476164874956 30 25.128224904554397 25.629555358451274 26.0706959116993 23.171523825295033 31 26.052472587507875 26.477280202891386 25.152195003179628 22.318052206421115 32 25.06818623481169 27.646446338359493 26.07553530069619 21.209832126132625 33 26.029409874319555 25.95666780846001 26.030619721568776 21.983302595651658 34 23.4808666438308 28.18656751968459 26.542082646177906 21.790483190306702 35 23.463626320529368 28.487592638381948 26.96227771892375 21.086503322164933 36 24.23694555914225 27.784066462958634 25.79205296711257 22.18693501078654 37 24.38121984361212 27.849927522588224 24.880054987557475 22.888797646242175 38 25.09540779791921 28.525778442185555 24.929809955681783 21.449003804213447 39 24.791811753817257 27.01914053963724 25.640822060959668 22.548225645585834 40 23.747335500472218 28.0202135229164 25.058885534083288 23.173565442528098 41 22.827624744703325 28.483811865728125 26.291644265588694 22.396919123979853 42 22.06957982761189 28.04252008157395 25.340931174058458 24.546968916755706 43 22.914582515741248 27.830116273882194 26.108654869143678 23.14664634123288 44 22.81393834769649 27.750568817245767 25.167696171060307 24.26779666399744 45 22.479113121473958 28.132956163453386 26.09693447391683 23.290996241155828 46 24.072255102341735 27.21437963948064 24.754760181809797 23.958605076367828 47 22.32213544088724 28.47579662770202 25.670690164924864 23.53137776648587 48 23.843745203144696 28.082898733516775 25.213519135624633 22.859836927713893 49 23.130162172462214 27.901346030680212 25.622523121315165 23.34596867554241 50 22.73741550918312 28.526307750357095 25.77224171840654 22.96403502205325 51 22.7207801095063 28.231483098812006 26.26956455329037 22.778172238391324 52 22.97628472545163 28.147549945897143 25.268567185464292 23.607598143186934 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.5 8 1.0 9 1.0 10 1.0 11 150.5 12 300.0 13 1339.5 14 5606.0 15 8833.0 16 10904.0 17 12975.0 18 11873.0 19 10771.0 20 9223.0 21 7675.0 22 6862.0 23 6049.0 24 5875.0 25 5701.0 26 7436.5 27 9172.0 28 10146.0 29 11120.0 30 12499.0 31 13878.0 32 17122.0 33 20366.0 34 22931.5 35 25497.0 36 27144.5 37 28792.0 38 32582.5 39 41403.0 40 46433.0 41 44716.0 42 42999.0 43 45425.5 44 47852.0 45 52884.0 46 57916.0 47 61841.5 48 65767.0 49 67512.5 50 69258.0 51 71469.5 52 73681.0 53 78588.5 54 83496.0 55 85191.0 56 86886.0 57 86920.5 58 86955.0 59 89024.5 60 91094.0 61 87697.5 62 84301.0 63 79650.0 64 68714.5 65 62430.0 66 55813.0 67 49196.0 68 44446.0 69 39696.0 70 31425.5 71 23155.0 72 17873.5 73 12592.0 74 10649.5 75 8707.0 76 7207.0 77 5707.0 78 4880.5 79 4054.0 80 3208.5 81 2363.0 82 1856.5 83 1350.0 84 1013.5 85 677.0 86 549.5 87 422.0 88 288.5 89 146.0 90 137.0 91 128.5 92 120.0 93 117.5 94 115.0 95 100.0 96 85.0 97 42.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1322481.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.58082870368189 #Duplication Level Percentage of deduplicated Percentage of total 1 71.48744706708717 13.997834554841601 2 10.207338825621113 3.9973630612985698 3 4.256126118206345 2.5001542938559496 4 2.2476545043205576 1.7604375133663943 5 1.499691292916604 1.4682599157501623 6 1.0389230080099134 1.2205784073693624 7 0.782672522387228 1.072776361436006 8 0.585887286529216 0.9177726877754854 9 0.5108150219777655 0.9001963300152712 >10 5.25936367536054 23.7812586044927 >50 1.313659604264464 18.18382790017997 >100 0.7854915408239058 26.16956488425436 >500 0.01943658465728868 2.466600815971632 >1k 0.0054929478379294105 1.5633746693925457 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATGGCGGGGCCTTGGGTTTACGTGGCTCTGCATGTTTGTATCGGTGTCTGTT 2377 0.17973793196272764 No Hit ATGGCGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 2336 0.17663769838659307 No Hit ATGGCGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1531 0.1157672586600488 No Hit ATGGCGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1478 0.11175963964699681 No Hit ATGGCGGGGAACCAGAGCTGAACTAAGGCTGCTCCATCAACACTCCAGGCCC 1459 0.11032294603854423 No Hit ATGGCGGGATCCCAACCTTGAAGTTGTCATGTCATCCTTTTCTGTCTTCCAC 1406 0.10631532702549225 No Hit ATGGCGGGATCTACATGAATCATTGTTTTTGGGTCTCTGTACACTTAATCAA 1376 0.10404686343319866 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 6.049236246116202E-4 0.0 0.0 0.0 0.0 8 6.805390776880726E-4 0.0 0.0 0.0 0.0 9 0.0013610781553761453 0.0 0.0 0.0 0.0 10 0.004763773543816508 0.0 0.0 0.0 0.0 11 0.007259083495339442 0.0 0.0 0.0 0.0 12 0.00869577710379204 0.0 0.0 0.0 0.0 13 0.013383935194532095 0.0 0.0 0.0 0.0 14 0.020869865049100895 0.0 0.0 0.0 0.0 15 0.028582641262899052 0.0 0.0 0.0 0.0 16 0.03432941569670944 0.0 0.0 0.0 0.0 17 0.037202802913614635 0.0 0.0 0.0 0.0 18 0.040076190130519836 0.0 0.0 0.0 0.0 19 0.045596118205100865 0.0 0.0 0.0 0.0 20 0.04854512087508252 0.0 0.0 0.0 0.0 21 0.05202343171659933 0.0 0.0 0.0 0.0 22 0.05580420437042196 0.0 0.0 0.0 0.0 23 0.0586019761342507 0.0 0.0 0.0 0.0 24 0.061172901538850084 0.0 0.0 0.0 0.0 25 0.0643487505680611 0.0 0.0 0.0 0.0 26 0.06699529142573693 0.0 0.0 0.0 0.0 27 0.06994429409571858 0.0 0.0 0.0 0.0 28 0.07334698948415894 0.0 0.0 0.0 0.0 29 0.07591791488875832 0.0 0.0 0.0 0.0 30 0.07848884029335772 0.0 0.0 0.0 0.0 31 0.08151345841641582 0.0 0.0 0.0 0.0 32 0.08544546197639134 0.0 0.0 0.0 0.0 33 0.08801638738099073 0.0 0.0 0.0 0.0 34 0.09255331456557787 0.0 0.0 0.0 0.0 35 0.09565354814171244 0.0 0.0 0.0 0.0 36 0.09875378171784699 0.0 0.0 0.0 0.0 37 0.10298824709012833 0.0 0.0 0.0 0.0 38 0.1069958661031803 0.0 0.0 0.0 0.0 39 0.11070102330392648 0.0 0.0 0.0 0.0 40 0.11538918139466654 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATATTCG 145 0.0 46.000004 13 CGAGTTA 25 3.4174373E-5 46.0 24 CGACGGA 25 3.4174373E-5 46.0 32 CGATTAC 30 1.8616174E-6 46.0 12 TAACGGC 30 1.8616174E-6 46.0 32 TAGCCGG 20 6.311802E-4 46.0 9 ATCGTAC 30 1.8616174E-6 46.0 40 AACGGAT 25 3.4174373E-5 46.0 35 GCGATTA 20 6.311802E-4 46.0 39 TACTCGC 25 3.4174373E-5 46.0 43 TTGCCGA 20 6.311802E-4 46.0 13 CGCGTTT 40 5.6134013E-9 46.0 38 ATCGCGA 30 1.8616174E-6 46.0 23 GTATCCG 55 1.8189894E-12 45.999996 29 CGGGGAT 18175 0.0 45.557083 5 GCGGGGA 51635 0.0 45.42539 4 GCGGGGT 7460 0.0 45.229225 4 CGGGGAC 11045 0.0 44.97963 5 TGGCGGG 130325 0.0 44.97817 2 GGCGGGA 8310 0.0 44.97593 3 >>END_MODULE