SRR1527097_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1527097_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1362965
Sequences flagged as poor quality	0
Sequence length	52
%GC	52

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATGGCGGGGCCTTGGGTTTACGTGGCTCTGCATGTTTGTATCGGTGTCTGTT	2296	0.16845626997024868	No Hit
ATGGCGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG	2288	0.16786931432575303	No Hit
ATGGCGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1585	0.11629058706569867	No Hit
ATGGCGGGATCTACATGAATCATTGTTTTTGGGTCTCTGTACACTTAATCAA	1416	0.10389114907572829	No Hit
ATGGCGGGATCCCAACCTTGAAGTTGTCATGTCATCCTTTTCTGTCTTCCAC	1373	0.10073626248656423	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGACTA	35	1.01976184E-7	46.000004	30
ATAATCG	20	6.31187E-4	46.0	37
TATTACG	20	6.31187E-4	46.0	38
TACGTAA	20	6.31187E-4	46.0	46
CGTTAGC	65	0.0	45.999996	23
CGTAACC	65	0.0	45.999996	31
CGCAATC	65	0.0	45.999996	46
CGGGGAT	19235	0.0	45.461914	5
GCGGGGA	53695	0.0	45.297516	4
GCGGGGT	7775	0.0	45.11254	4
TGGCGGG	134970	0.0	44.950287	2
ATGGCGG	137465	0.0	44.88568	1
GGCGGGA	8390	0.0	44.7938	3
CGGGGAG	14065	0.0	44.77355	5
CGGGGAC	10780	0.0	44.762524	5
GGCGGGG	125170	0.0	44.62188	3
GCGGGAT	3880	0.0	44.51804	4
CGGGGGA	15630	0.0	44.278313	5
CGGGATA	485	0.0	44.103092	5
ATATTCG	305	0.0	43.737705	13