##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527093_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2343431 Sequences flagged as poor quality 0 Sequence length 50 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.52001787123239 33.0 31.0 34.0 31.0 34.0 2 32.041138825935136 33.0 31.0 34.0 30.0 34.0 3 32.73411975859327 34.0 31.0 34.0 31.0 34.0 4 36.35792690290433 37.0 37.0 37.0 35.0 37.0 5 36.368721332098104 37.0 37.0 37.0 35.0 37.0 6 36.4887594300835 37.0 37.0 37.0 35.0 37.0 7 36.527831628070125 37.0 37.0 37.0 35.0 37.0 8 36.67448412178553 37.0 37.0 37.0 35.0 37.0 9 38.766415140876774 39.0 39.0 39.0 39.0 39.0 10 38.27649373930788 39.0 39.0 39.0 37.0 39.0 11 38.06027529720312 39.0 38.0 39.0 37.0 39.0 12 37.56777434454012 39.0 37.0 39.0 35.0 39.0 13 37.47148902613305 39.0 37.0 39.0 35.0 39.0 14 38.28473806141508 40.0 38.0 40.0 35.0 40.0 15 38.24608490712976 40.0 38.0 40.0 35.0 40.0 16 38.084654935434415 40.0 38.0 40.0 35.0 40.0 17 38.122259627016966 40.0 38.0 40.0 34.0 40.0 18 38.06400657838869 40.0 38.0 40.0 34.0 40.0 19 38.03111932888146 40.0 38.0 40.0 34.0 40.0 20 37.81016680243626 40.0 38.0 40.0 33.0 40.0 21 38.01914244541444 40.0 38.0 40.0 34.0 40.0 22 37.86023356352288 40.0 38.0 40.0 34.0 40.0 23 37.945171417464394 40.0 38.0 40.0 34.0 40.0 24 38.00466836872944 40.0 37.0 40.0 34.0 40.0 25 37.97402270431687 40.0 37.0 40.0 34.0 40.0 26 37.87466368755897 40.0 37.0 40.0 34.0 40.0 27 37.779400374920364 40.0 37.0 40.0 34.0 40.0 28 37.60998126251637 40.0 37.0 40.0 34.0 40.0 29 37.824185137091725 40.0 37.0 40.0 34.0 40.0 30 37.846802402118946 40.0 37.0 40.0 34.0 40.0 31 37.833605939325714 40.0 37.0 40.0 34.0 40.0 32 37.135323805138704 40.0 36.0 40.0 33.0 40.0 33 37.341679358171845 40.0 36.0 40.0 33.0 40.0 34 37.27566973382191 40.0 36.0 40.0 33.0 40.0 35 37.31205228572977 40.0 36.0 40.0 33.0 40.0 36 37.2000524017989 40.0 36.0 40.0 33.0 40.0 37 37.194670549292894 40.0 35.0 40.0 33.0 40.0 38 37.038414615151886 40.0 35.0 40.0 33.0 40.0 39 37.02615523990252 40.0 35.0 40.0 33.0 40.0 40 36.925208807086705 40.0 35.0 40.0 32.0 40.0 41 36.83980027574953 40.0 35.0 40.0 32.0 40.0 42 36.73017511503432 39.0 35.0 40.0 32.0 40.0 43 36.68027989729589 39.0 35.0 40.0 32.0 40.0 44 36.53447786600075 39.0 35.0 40.0 32.0 40.0 45 36.45446697598521 39.0 35.0 40.0 31.0 40.0 46 36.14227131074053 39.0 35.0 40.0 31.0 40.0 47 36.08542389342806 38.0 35.0 40.0 31.0 40.0 48 35.973982165465934 38.0 35.0 40.0 30.0 40.0 49 35.67172406612356 38.0 35.0 40.0 30.0 40.0 50 35.30658850207239 37.0 34.0 40.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 0.0 14 3.0 15 4.0 16 48.0 17 91.0 18 237.0 19 496.0 20 883.0 21 1508.0 22 2263.0 23 3335.0 24 5358.0 25 7329.0 26 9283.0 27 12929.0 28 17512.0 29 22554.0 30 30443.0 31 39309.0 32 50879.0 33 70447.0 34 141665.0 35 176709.0 36 176228.0 37 332269.0 38 762251.0 39 479396.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 100.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 100.0 0.0 7 99.76423457742088 0.1629235083089709 0.06119232868388273 0.011649585586262194 8 99.62682920896754 0.24664690362122885 0.0902522839375258 0.036271603473710126 9 97.89138233641187 1.2557655847345197 0.2744693571092983 0.5783827217443143 10 52.16931925881325 35.84073949691713 4.404055421303209 7.585885822966411 11 34.57379372381777 21.58224415397765 24.2900260344768 19.55393608772778 12 30.651766576442828 16.223392111822367 26.81615119028467 26.30869012145013 13 25.2924878095408 16.440979060189953 30.664568318845316 27.601964811423933 14 25.745968197911523 17.840721574477765 30.454321036121822 25.95898919148889 15 27.443607257905185 18.583350651245972 29.373085872807863 24.599956218040983 16 32.15383768500118 20.07180924038301 24.890043700881314 22.884309373734492 17 31.802216493679563 19.336861209056295 24.100048177223908 24.76087412004023 18 28.95852278134069 20.560153040563176 24.747987032688396 25.733337145407738 19 29.088161759403196 21.71661977672908 24.103803354995303 25.091415108872418 20 28.075458590417213 22.87300116794563 24.878522132719077 24.17301810891808 21 30.37704118448548 20.840255164329566 25.63856157915467 23.144142072030284 22 29.710497130062713 20.22956937925631 26.142054107844437 23.91787938283653 23 29.661807836458593 21.116900817647288 25.079680178336805 24.14161116755731 24 31.057069740905536 19.459203193949385 24.294976041539094 25.188751023605988 25 28.72967029965892 19.729149268743136 24.22490783812282 27.316272593475123 26 27.135213283429298 20.402990316335323 24.82650438609031 27.635292014145072 27 26.68207427485597 18.593805407541335 24.888678181691716 29.835442135910977 28 27.30479369778756 22.09183884654594 23.33262639266955 27.270741062996944 29 29.341508241548397 21.969198154330126 22.706919896510712 25.982373707610762 30 29.233120155874015 20.116060596620937 23.380206201932126 27.270613045572922 31 30.46490380984121 21.654445981127672 23.000079797527643 24.880570411503474 32 33.13282959899395 20.18326974423399 23.097373039786532 23.586527616985524 33 32.37219273791291 19.839798995575293 24.729296488780765 23.058711777731027 34 27.970569647666178 22.62763443856465 26.69056609731629 22.711229816452885 35 26.34419362037969 24.98400849011556 26.725173474277675 21.946624415227074 36 27.725501625607922 26.803776172628936 22.384913402613517 23.085808799149625 37 28.690624985331336 26.401161374070753 21.432293077969867 23.475920562628044 38 29.884686171685875 26.482879163073285 20.93916996062611 22.69326470461473 39 28.867161013061615 23.878663378610252 21.95003821320107 25.304137395127057 40 28.1821397771046 23.666837214323785 22.0839017662564 26.06712124231522 41 25.209660536196715 24.277992396618462 22.11748500382559 28.394862063359238 42 24.6760839128611 22.387815130891415 23.653267367377147 29.28283358887034 43 24.96847570933388 21.484396169547985 24.864098836278945 28.683029284839197 44 25.98459267629386 20.76937618389447 25.22813771773097 28.017893422080704 45 27.088572268609575 22.28996714646175 22.987534089973206 27.633926494955475 46 26.805312381717233 23.52388442416269 23.325500089398833 26.34530310472124 47 26.045102245382946 22.070459936733787 25.02783312160674 26.856604696276527 48 27.6343958921769 21.881079494126347 25.432922923696065 25.051601690000684 49 27.93314588737624 22.12380053007748 24.795694859374994 25.14735872317128 50 25.64086589278711 21.607378241561197 25.584708916114874 27.16704694953681 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.5 4 1.0 5 3.0 6 5.0 7 55.5 8 106.0 9 732.5 10 1359.0 11 2358.5 12 3358.0 13 3964.0 14 4570.0 15 3848.0 16 3126.0 17 3261.5 18 3397.0 19 4186.5 20 4976.0 21 4902.0 22 4828.0 23 7869.0 24 10910.0 25 10509.5 26 10109.0 27 11719.0 28 13329.0 29 16559.5 30 19790.0 31 24500.5 32 29211.0 33 30347.5 34 31484.0 35 34946.5 36 38409.0 37 40907.5 38 43406.0 39 49744.0 40 56082.0 41 58725.5 42 61369.0 43 71055.5 44 80742.0 45 85372.5 46 90003.0 47 99533.0 48 109063.0 49 113616.0 50 118169.0 51 124127.0 52 130085.0 53 143569.5 54 157054.0 55 182470.5 56 207887.0 57 219024.0 58 230161.0 59 232374.5 60 234588.0 61 231733.5 62 228879.0 63 189918.5 64 150958.0 65 121499.5 66 92041.0 67 75216.5 68 58392.0 69 50801.5 70 43211.0 71 36233.0 72 29255.0 73 28099.0 74 26943.0 75 18461.5 76 9980.0 77 6728.0 78 3476.0 79 2737.5 80 1999.0 81 1260.0 82 521.0 83 336.5 84 152.0 85 96.5 86 41.0 87 23.0 88 5.0 89 3.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2343431.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.132877666670637 #Duplication Level Percentage of deduplicated Percentage of total 1 65.84783001795977 4.696845161338295 2 11.353925864897136 1.6197232846151772 3 4.97208402815801 1.0639580136377413 4 2.679342455803829 0.7644568785746234 5 1.585749551514133 0.5655478780464069 6 0.9211778327166709 0.394238927401008 7 0.5904345288246652 0.29480480849992585 8 0.42531444246009215 0.24269727103488517 9 0.31481393217902703 0.20209763393968916 >10 4.172679293171595 7.951354282904585 >50 3.365400962552792 17.630220201339704 >100 3.5508414237546804 45.55016522100778 >500 0.15109963505339066 7.288877966851305 >1k 0.06493538035352325 8.807204931240685 >5k 0.0031218932862270795 1.4941438263610027 >10k+ 0.001248757314490832 1.4336637132071608 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATCTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 17775 0.7585032373472913 No Hit GATCTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 14416 0.6151663949141237 No Hit GATCTTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 9425 0.40218807381143284 No Hit GATCTTGGGGAGCCAGTAGACTGGTTCTTCACTTTACCTACCGTATGCTA 8291 0.3537974875300361 No Hit GATCTTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 5334 0.22761497991619978 No Hit GATCTTGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTT 5287 0.225609373606477 No Hit GATCTTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 5212 0.2224089380058555 No Hit GATCTTGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 4762 0.2032063244021266 No Hit GATCTTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 4731 0.20188347768720308 No Hit GATCTTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 4261 0.18182741458997512 No Hit GATCTTGGGGGGGCTGGAGAGATGGCTCAGGGGTTAAGAGCACTGACTGC 4250 0.18135801736855064 No Hit GATCTTGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGC 4198 0.17913904868545308 No Hit GATCTTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 4138 0.1765787002049559 No Hit GATCTTGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCC 3801 0.16219807623949672 No Hit GATCTTGGGACATGAATCATTGTTTTTGGGTCTCTGTACACTTAATCAAT 3740 0.15959505528432455 No Hit GATCTTGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 3684 0.15720539670252717 No Hit GATCTTGGGATTTCTCTTCTATATCAGGCTCTTGTTAATTAGTCTTTTTT 3525 0.15042047322920965 No Hit GATCTTGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 3507 0.1496523686850605 No Hit GATCTTGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCT 3250 0.13868554269359756 No Hit GATCTTGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCC 3078 0.13134587704950562 No Hit GATCTTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 2942 0.125542420493712 No Hit GATCTTGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTC 2905 0.12396353893073873 No Hit GATCTTGGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAA 2849 0.12157388034894136 No Hit GATCTTGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTA 2794 0.11922689424181893 No Hit GATCTTGGGGGGCTGGAGAGATGGCTCAGCGGGTAAGAGCACTGACTGCT 2756 0.11760534020417072 No Hit GATCTTGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTT 2696 0.11504499172367354 No Hit GATCTTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 2693 0.11491697429964869 No Hit GATCTTGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGA 2685 0.11457559450224904 No Hit GATCTTGGGATGTACATACTGACTGTCAATACAGCCTCCTTGCTATGTCC 2553 0.10894282784515526 No Hit GATCTTGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGT 2543 0.10851610309840572 No Hit GATCTTGGGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACCCGACTGC 2415 0.10305402634001172 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 4.267247467495309E-5 0.0 0.0 0.0 0.0 8 1.7068989869981237E-4 0.0 0.0 0.0 0.0 9 3.8405227207457783E-4 0.0 0.0 0.0 0.0 10 0.007467683068116791 0.0 0.0 0.0 0.0 11 0.013228467149235458 0.0 0.0 0.0 0.0 12 0.017581059566080675 0.0 0.0 0.0 0.0 13 0.023043136324474668 0.0 0.0 0.0 0.0 14 0.03008409464584193 0.0 0.0 0.0 0.0 15 0.03772246761265853 0.0 0.0 0.0 0.0 16 0.04617161759829925 0.0 0.0 0.0 0.0 17 0.05201774662876782 0.0 0.0 0.0 0.0 18 0.0585893077287106 0.0 0.0 0.0 0.0 19 0.06853199432797466 0.0 0.0 0.0 0.0 20 0.07702381678829033 0.0 0.0 0.0 0.0 21 0.08363805036290806 0.0 0.0 0.0 0.0 22 0.0910630609563499 0.0 0.0 0.0 0.0 23 0.09951221094199061 0.0 0.0 0.0 0.0 24 0.10710791143413226 0.0 0.0 0.0 0.0 25 0.1131674028379756 0.0 0.0 0.0 0.0 26 0.11969629146324343 0.0 0.0 0.0 0.0 27 0.12793207907550938 0.0 0.0 0.0 0.0 28 0.13868554269359756 0.0 0.0 0.0 0.0 29 0.1461105532870394 0.0 0.0 0.0 0.0 30 0.15323685655775657 0.0 0.0 0.0 0.0 31 0.16078988457522325 0.0 0.0 0.0 0.0 32 0.17060455375046246 0.0 0.0 0.0 0.0 33 0.1794804284828527 0.0 0.0 0.0 0.0 34 0.1878442335191435 0.0 0.0 0.0 0.0 35 0.20662012237612287 0.0 0.0 0.0 0.0 36 0.22010462437340805 0.0 0.0 0.0 0.0 37 0.23226627965576968 0.0 0.0 0.0 0.0 38 0.24233698367905862 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCGAT 20 7.8581594E-4 44.0 29 CGATTAT 20 7.8581594E-4 44.0 12 CGATTAC 30 2.5288482E-6 44.0 17 CGATTAA 20 7.8581594E-4 44.0 30 ATCGTAC 20 7.8581594E-4 44.0 25 TGCGATA 20 7.8581594E-4 44.0 27 GTCAATT 30 2.5288482E-6 44.0 29 CGAATAC 25 4.4442597E-5 44.0 29 CGTACAA 35 1.4469515E-7 44.0 22 ACGTAAT 40 8.3182385E-9 44.0 38 CGTTTAA 35 1.4469515E-7 44.0 30 CGATAGT 20 7.8581594E-4 44.0 37 GCGTAAT 20 7.8581594E-4 44.0 14 GCGTAAC 30 2.5288482E-6 44.0 34 TCAACCG 35 1.4469515E-7 44.0 34 TAGTACG 20 7.8581594E-4 44.0 37 CCGTATG 1005 0.0 42.905476 41 TTGGGAT 28485 0.0 42.532562 5 ACCGTAT 1005 0.0 42.467663 40 GATCTTG 244150 0.0 42.116734 1 >>END_MODULE