##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527090_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7933529 Sequences flagged as poor quality 0 Sequence length 50 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.275256824548066 33.0 31.0 34.0 31.0 34.0 2 32.662471139892475 34.0 31.0 34.0 31.0 34.0 3 32.958928996162996 34.0 31.0 34.0 31.0 34.0 4 35.87165131683517 37.0 35.0 37.0 35.0 37.0 5 36.267953517280894 37.0 35.0 37.0 35.0 37.0 6 36.27224303333359 37.0 37.0 37.0 35.0 37.0 7 36.59055371197358 37.0 37.0 37.0 35.0 37.0 8 36.63060600144021 37.0 37.0 37.0 35.0 37.0 9 38.51194594486262 39.0 39.0 39.0 37.0 39.0 10 37.935779903243564 39.0 38.0 39.0 35.0 39.0 11 36.662926422781084 38.0 35.0 39.0 33.0 39.0 12 36.52480113200569 39.0 35.0 39.0 33.0 39.0 13 36.26531673357468 38.0 35.0 39.0 33.0 39.0 14 36.98859057551816 39.0 35.0 40.0 33.0 40.0 15 37.10288662208205 39.0 35.0 40.0 33.0 40.0 16 36.969171222541696 39.0 35.0 40.0 33.0 40.0 17 36.88982355771309 39.0 35.0 40.0 32.0 40.0 18 36.817106863792894 39.0 35.0 40.0 32.0 40.0 19 36.73220366371636 39.0 35.0 40.0 31.0 40.0 20 36.47097351002309 39.0 35.0 40.0 31.0 40.0 21 36.70964825363341 39.0 35.0 40.0 31.0 40.0 22 36.59847830643841 39.0 35.0 40.0 31.0 40.0 23 36.59908648471569 38.0 35.0 40.0 31.0 40.0 24 36.5983860398065 38.0 35.0 40.0 32.0 40.0 25 36.48366407937754 38.0 35.0 40.0 32.0 40.0 26 36.361877923431045 38.0 35.0 40.0 31.0 40.0 27 36.22236296104798 38.0 35.0 40.0 31.0 40.0 28 35.99074434592727 38.0 34.0 40.0 31.0 40.0 29 36.27907958740681 38.0 35.0 40.0 31.0 40.0 30 36.26527236492108 38.0 35.0 40.0 31.0 40.0 31 36.13347187613482 38.0 35.0 40.0 31.0 40.0 32 35.42233172652423 37.0 35.0 40.0 29.0 40.0 33 35.56069209553529 37.0 35.0 40.0 30.0 40.0 34 35.225483640382485 37.0 34.0 40.0 28.0 40.0 35 35.252434572306974 37.0 34.0 40.0 29.0 40.0 36 35.077882742976044 36.0 34.0 40.0 29.0 40.0 37 34.92816828425282 36.0 34.0 40.0 29.0 40.0 38 34.706624378634025 35.0 34.0 40.0 28.0 40.0 39 34.57379799078065 35.0 34.0 40.0 27.0 40.0 40 34.445782198565105 35.0 34.0 40.0 27.0 40.0 41 34.27664107612136 35.0 34.0 39.0 26.0 40.0 42 34.1483631054982 35.0 34.0 39.0 26.0 40.0 43 34.091424383776754 35.0 33.0 39.0 26.0 40.0 44 33.91167663217718 35.0 33.0 39.0 26.0 40.0 45 33.78126934432331 35.0 33.0 39.0 25.0 40.0 46 33.4951936269471 35.0 33.0 38.0 23.0 40.0 47 33.367165103953106 35.0 33.0 38.0 23.0 40.0 48 33.246924666185755 35.0 33.0 37.0 23.0 40.0 49 33.0221840747037 35.0 33.0 37.0 23.0 40.0 50 32.555364327778975 35.0 32.0 37.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 5.0 11 8.0 12 19.0 13 32.0 14 98.0 15 234.0 16 595.0 17 1448.0 18 3140.0 19 5861.0 20 9375.0 21 14050.0 22 20920.0 23 29878.0 24 41044.0 25 56061.0 26 75520.0 27 100095.0 28 132532.0 29 163687.0 30 192238.0 31 231424.0 32 305244.0 33 465794.0 34 935887.0 35 769475.0 36 1037081.0 37 1264681.0 38 1603132.0 39 473971.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 100.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 0.0 100.0 6 100.0 0.0 0.0 0.0 7 99.34053307172634 0.4121873128591324 0.1719663468804362 0.07531326853409119 8 98.26950906715032 1.2239193932485783 0.23609921889741628 0.2704723207036869 9 91.32739037066607 4.254600947447221 2.6052844831095974 1.812724198777114 10 51.435924668580654 28.75234967944278 8.65299666768723 11.158728984289338 11 35.43188661691411 27.305692082300325 19.144431185667816 18.11799011511775 12 35.99332655114767 17.244293176466613 24.830160701498666 21.932219570887053 13 25.01052179931529 17.130459849582703 28.771130728834542 29.087887622267466 14 23.473034509611043 20.864636657911 30.257896580449884 25.40443225202807 15 26.38121068190461 20.188922231203794 27.965915294442105 25.463951792449492 16 31.733015660496104 22.550834565550844 24.927053269736582 20.789096504216474 17 33.13365338426317 19.76527721774257 24.70132774456361 22.39974165343065 18 30.658474935933306 20.706611143666333 25.0376849949121 23.597228925488267 19 30.036973457839505 23.00282761933561 23.411561235863637 23.54863768696125 20 27.880795545084663 24.043285150908254 24.406490478575172 23.66942882543191 21 27.2122153962001 23.896616499416588 27.981141809653685 20.910026294729622 22 27.239882781042336 22.210532034356966 28.171536273454095 22.378048911146603 23 28.16039369113039 23.808698499747084 26.37701330643652 21.653894502686004 24 31.569406250358444 21.720636554048014 23.301849656061005 23.408107539532534 25 28.43153406258426 20.284781211488607 23.178058591580115 28.105626134347023 26 27.23340394923873 20.3095873223631 23.686760330743102 28.770248397655067 27 27.96091121618135 19.745626441902463 23.93304417239793 28.360418169518255 28 28.351519229336652 24.721041544059396 20.620230921195347 26.3072083054086 29 31.70587767436156 24.395158825284437 20.056496925895146 23.842466574458857 30 29.840919469759296 23.875642226807265 23.695898760816277 22.587539542617165 31 30.91759039388398 23.873007837999964 22.35433941188089 22.855062356235166 32 32.56506656747584 24.200907313756588 21.559006086698616 21.675020032068957 33 32.8210812615672 24.378583603841367 21.68420888106667 21.116126253524754 34 26.804780066979024 25.693269665996056 26.872782591454573 20.629167675570354 35 25.406171704924756 30.50007127975457 24.740137711729545 19.353619303591127 36 26.08441968259018 31.920095080007897 21.437698154251407 20.55778708315051 37 28.13072215403763 29.88953591774858 20.825574596122358 21.15416733209143 38 29.3384066535838 29.254938124005093 20.195791809672595 21.21086341273852 39 28.849544761227946 27.61512562694357 20.670939754553114 22.86438985727537 40 27.512018926255895 26.29512036824974 21.260740333841348 24.932120371653017 41 23.51055879420117 28.428269437220184 22.202868357826635 25.858303410752015 42 23.084934837951685 27.447331446068958 23.00117639955687 26.466557316422488 43 23.842365736609775 24.88641561655601 23.114555956119904 28.156662690714306 44 24.21401623413742 24.763822001532986 22.95484140790309 28.0673203564265 45 26.955545256089692 25.284762934628464 21.779223344365413 25.980468464916434 46 26.043000536079212 28.68742270936427 21.419232223138028 23.85034453141849 47 24.571536828062264 26.742096739042616 23.300979929612662 25.385386503282458 48 25.046621749287105 26.16086737692646 25.39526861249262 23.39724226129381 49 27.783171902440895 26.05343725345934 23.015066813268092 23.148324030831677 50 24.073070130581232 26.760877788434378 22.918779272124677 26.247272808859712 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 122.5 6 245.0 7 739.0 8 1233.0 9 11893.5 10 22554.0 11 28150.5 12 33747.0 13 25390.0 14 17033.0 15 19237.5 16 21442.0 17 19815.5 18 18189.0 19 19731.0 20 21273.0 21 23231.5 22 25190.0 23 27194.0 24 29198.0 25 33082.5 26 36967.0 27 46942.5 28 56918.0 29 64492.5 30 72067.0 31 84024.0 32 95981.0 33 122207.0 34 148433.0 35 182999.0 36 217565.0 37 212819.0 38 208073.0 39 201577.0 40 195081.0 41 199830.5 42 204580.0 43 216599.5 44 228619.0 45 239744.0 46 250869.0 47 266826.5 48 282784.0 49 297223.0 50 311662.0 51 333632.5 52 355603.0 53 383739.5 54 411876.0 55 465935.5 56 519995.0 57 577714.0 58 635433.0 59 676903.5 60 718374.0 61 730283.0 62 742192.0 63 725356.0 64 708520.0 65 578940.5 66 449361.0 67 367119.5 68 284878.0 69 244272.5 70 203667.0 71 182894.0 72 162121.0 73 130267.5 74 98414.0 75 88877.0 76 79340.0 77 59288.0 78 39236.0 79 26752.5 80 14269.0 81 10690.5 82 7112.0 83 4761.5 84 2411.0 85 1539.0 86 667.0 87 459.0 88 251.0 89 160.0 90 69.0 91 43.0 92 17.0 93 18.5 94 20.0 95 10.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 7933529.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.033530222664032 #Duplication Level Percentage of deduplicated Percentage of total 1 67.0810912089194 5.388979735961365 2 10.607523496331792 1.7043172119080057 3 4.812230812945507 1.1597760502269847 4 2.657485594126129 0.8539596334682615 5 1.5383715259413426 0.617927707366778 6 0.9762006676848998 0.47054025403388694 7 0.6814970202815969 0.38323788363613837 8 0.5375742642429 0.3454895278977374 9 0.40619172991333446 0.29368381846094627 >10 5.004653114425911 10.355486174843914 >50 2.9338394176335645 17.058912982709113 >100 2.567022336188059 36.7100094643395 >500 0.12691317098377397 6.789186299493193 >1k 0.062299824818854974 9.135198343324072 >5k 0.004461791167398101 2.651083750385886 >10k+ 0.0026440243954951714 6.082211161944318 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TAGTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 103252 1.3014636991936375 No Hit TAGTCGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 50599 0.63778679072075 No Hit TAGTCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 47713 0.6014095366639487 No Hit TAGTCGGGGGAGTGCAGTGCTTAGTCGGGGAAAAAAAAAAAAAAAAAAAA 38575 0.486227503548547 No Hit TAGTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 31656 0.3990153688226261 No Hit TAGTCGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 26534 0.334453935947042 No Hit TAGTCGGGGGAGTGCAGTGCTTAGTCGGGAAAAAAAAAAAAAAAAAAAAA 22953 0.2893163937511289 No Hit TAGTCGGGGAGTGCAGTGCTTAGTCGGGGAAAAAAAAAAAAAAAAAAAAA 20616 0.2598591370876693 No Hit TAGTCGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 20028 0.2524475551800466 No Hit TAGTCGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 19278 0.24299400682848707 No Hit TAGTCGGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTAGTCGGGGA 18066 0.22771707269236677 No Hit TAGTCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 13220 0.1666345456101566 No Hit TAGTCGGGGGTGCAGTGCTTAGTCGGGGAAAAAAAAAAAAAAAAAAAAAA 12624 0.1591221258534506 No Hit TAGTCGGGGAGTGCAGTGCTTAGTCGGGAAAAAAAAAAAAAAAAAAAAAA 11772 0.14838289492607892 No Hit TAGTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC 10800 0.13613109626245773 No Hit TAGTCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 10466 0.13192111606322987 No Hit TAGTCGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 9900 0.12478683824058624 No Hit TAGTCGGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTAT 9673 0.12192556427284755 No Hit TAGTCGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGAC 9515 0.11993401675345235 No Hit TAGTCGGGGGGGGCTGGAGAGATGGCTCAGGGGTTAAGAGCACTGACTGC 9119 0.1149425432238289 No Hit TAGTCGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 8882 0.11195522194473606 No Hit TAGTCGGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGA 8596 0.10835026884000803 No Hit TAGTCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 8368 0.10547639014113393 No Hit TAGTCGGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 8240 0.10386298455580109 No Hit TAGTCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 8102 0.10212353165911413 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.002697412462978329 0.0 0.0 0.0 0.0 8 0.003806628802894651 0.0 0.0 0.0 0.0 9 0.007663676530330954 0.0 0.0 0.0 0.0 10 0.025587604204887888 0.0 0.0 0.0 0.0 11 0.05086009013139046 0.0 0.0 0.0 0.0 12 0.06119596966242891 0.0 0.0 0.0 0.0 13 0.07091421736783214 0.0 0.0 0.0 0.0 14 0.1010143153191978 0.0 0.0 0.0 0.0 15 0.11973234105528574 0.0 0.0 0.0 0.0 16 0.14220657666972666 0.0 0.0 0.0 0.0 17 0.15323571641321285 0.0 0.0 0.0 0.0 18 0.16499593056255293 0.0 0.0 0.0 0.0 19 0.17993253695801703 0.0 0.0 0.0 0.0 20 0.19316750465020044 0.0 0.0 0.0 0.0 21 0.2054949317006341 0.0 0.0 0.0 0.0 22 0.218225710147401 0.0 0.0 0.0 0.0 23 0.23370431998168784 0.0 0.0 0.0 0.0 24 0.2482879939053604 0.0 0.0 0.0 0.0 25 0.25968267085177354 0.0 0.0 0.0 0.0 26 0.27223698306264466 0.0 0.0 0.0 0.0 27 0.2873248462317337 0.0 0.0 0.0 0.0 28 0.3250886207134303 0.0 0.0 0.0 0.0 29 0.3386261019528636 0.0 0.0 0.0 0.0 30 0.35862981026476365 0.0 0.0 0.0 0.0 31 0.37437311945289414 0.0 0.0 0.0 0.0 32 0.39146513487251383 0.0 0.0 0.0 0.0 33 0.4064269507302488 0.0 0.0 0.0 0.0 34 0.42556093259380534 0.0 0.0 0.0 0.0 35 0.4799629521742468 0.0 0.0 0.0 0.0 36 0.5012271335996881 0.0 0.0 0.0 0.0 37 0.521256051373859 0.0 0.0 0.0 0.0 38 0.5399488676476761 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGGGG 162865 0.0 41.40104 5 CGGGGAT 50605 0.0 41.13072 5 TCGGGGG 402050 0.0 41.07305 4 CGGGGGC 78325 0.0 40.724926 5 CGGGGGT 62010 0.0 39.990967 5 GTCGGGG 783380 0.0 39.974804 3 TCGGGGC 86010 0.0 39.856293 4 CGGGGGA 103550 0.0 39.604248 5 AGTCGGG 862335 0.0 39.541756 2 CGGGGAC 35205 0.0 39.519386 5 TAGTCGG 879060 0.0 39.4589 1 CGGGGAG 77665 0.0 39.422394 5 TCGGGGT 65535 0.0 38.336765 4 CGGGGCT 31680 0.0 38.083332 5 GTCGGGT 22595 0.0 37.83669 3 CGGGGCA 36685 0.0 37.769115 5 TCGGGGA 234790 0.0 37.742664 4 CGGGGTC 12455 0.0 37.535126 5 CGGGGTA 16675 0.0 37.49565 5 TCGGGAT 6265 0.0 37.398247 4 >>END_MODULE