##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527089_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8498638 Sequences flagged as poor quality 0 Sequence length 52 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.273628433167765 33.0 31.0 34.0 31.0 34.0 2 32.581831465230074 34.0 31.0 34.0 31.0 34.0 3 32.91270813040866 34.0 31.0 34.0 31.0 34.0 4 35.80099717154678 37.0 35.0 37.0 35.0 37.0 5 36.2095564018611 37.0 35.0 37.0 35.0 37.0 6 36.287959317716556 37.0 37.0 37.0 35.0 37.0 7 36.61782335004738 37.0 37.0 37.0 35.0 37.0 8 36.62145663811072 37.0 37.0 37.0 35.0 37.0 9 38.515097124974616 39.0 39.0 39.0 37.0 39.0 10 37.90703216209468 39.0 38.0 39.0 35.0 39.0 11 36.738393610835054 39.0 35.0 39.0 33.0 39.0 12 36.644819322813845 39.0 35.0 39.0 33.0 39.0 13 36.494304969808105 39.0 35.0 39.0 33.0 39.0 14 37.212325080795296 40.0 35.0 40.0 33.0 40.0 15 37.213704948957705 40.0 35.0 40.0 33.0 40.0 16 32.238329012248784 38.0 33.0 40.0 3.0 40.0 17 33.6405965285261 38.0 33.0 40.0 16.0 40.0 18 35.561452435084306 38.0 33.0 40.0 27.0 40.0 19 36.52812615386136 38.0 35.0 40.0 31.0 40.0 20 36.87669647771796 39.0 35.0 40.0 31.0 40.0 21 37.126351069430186 39.0 35.0 40.0 33.0 40.0 22 37.19965869825259 39.0 35.0 40.0 33.0 40.0 23 37.11100343372667 39.0 35.0 40.0 33.0 40.0 24 37.051002760677655 39.0 35.0 40.0 33.0 40.0 25 36.96751102941436 39.0 35.0 40.0 33.0 40.0 26 36.86492870975326 39.0 35.0 40.0 33.0 40.0 27 36.7212953416771 39.0 35.0 40.0 32.0 40.0 28 36.55801670808899 38.0 35.0 40.0 32.0 40.0 29 36.28874956198864 38.0 35.0 40.0 31.0 40.0 30 36.11692508846712 38.0 35.0 40.0 31.0 40.0 31 35.93277652254397 38.0 35.0 40.0 31.0 40.0 32 35.83578074510292 37.0 35.0 40.0 31.0 40.0 33 35.47938293171212 37.0 34.0 40.0 30.0 40.0 34 35.02582849157712 37.0 34.0 40.0 27.0 40.0 35 35.00681638634332 36.0 34.0 40.0 28.0 40.0 36 34.966109628389866 36.0 34.0 40.0 29.0 40.0 37 34.63195126089616 35.0 34.0 39.0 28.0 40.0 38 34.57933412389138 35.0 34.0 39.0 28.0 40.0 39 34.15283319515433 35.0 33.0 39.0 26.0 40.0 40 34.066481711540135 35.0 33.0 39.0 26.0 40.0 41 33.98187709607116 35.0 33.0 39.0 26.0 40.0 42 33.9054271990406 35.0 33.0 39.0 26.0 40.0 43 33.82866501667679 35.0 33.0 38.0 26.0 40.0 44 34.09579076082544 35.0 33.0 39.0 27.0 40.0 45 34.16428750112665 35.0 34.0 39.0 27.0 40.0 46 34.091717284581364 35.0 34.0 38.0 27.0 40.0 47 33.79246556918885 35.0 33.0 38.0 26.0 40.0 48 33.744458817989425 35.0 33.0 38.0 26.0 40.0 49 33.694530464763886 35.0 33.0 37.0 27.0 40.0 50 33.2005077754812 35.0 33.0 37.0 24.0 40.0 51 33.248938712297196 35.0 33.0 37.0 24.0 40.0 52 32.93140547932504 35.0 33.0 36.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 6.0 12 7.0 13 15.0 14 71.0 15 182.0 16 497.0 17 1220.0 18 2641.0 19 4955.0 20 8621.0 21 14248.0 22 21937.0 23 32490.0 24 45581.0 25 61255.0 26 82951.0 27 107885.0 28 134000.0 29 160333.0 30 201131.0 31 268918.0 32 385175.0 33 588590.0 34 1008336.0 35 958055.0 36 1205818.0 37 1395648.0 38 1354073.0 39 453999.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 100.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 0.0 100.0 6 100.0 0.0 0.0 0.0 7 99.35682635264615 0.40385294678982675 0.16549710671286386 0.07382359385115592 8 98.27411168707269 1.2071934349951134 0.2450980968950554 0.2735967810371497 9 91.40369315647989 4.2043560391676875 2.5888383526866305 1.8031124516657844 10 51.66427844085134 28.413035123981047 8.668236016171061 11.25445041899655 11 35.510042903345216 27.147255830875487 19.14765636564353 18.195044900135763 12 36.33313949835256 17.028246173092676 24.687591117541423 21.95102321101334 13 25.18436483587135 16.860113349927364 28.675924306930124 29.279597507271166 14 23.542042854396197 20.731698420382184 30.255424457424823 25.470834267796793 15 26.583942038712554 20.09598479191607 27.891751595961612 25.42832157340976 16 29.94982254803652 29.84096981186868 22.064676716433855 18.144530923660945 17 33.437746142381876 19.549544291685326 24.627781533935202 22.384928031997596 18 30.94917091421002 20.463055374284682 24.935301397706315 23.652472313798985 19 30.061663998395975 22.866299282308532 23.424847604992706 23.647189114302787 20 27.913060892816 23.882520940414217 24.440869231046197 23.763548935723584 21 27.348229210374654 23.729614086398314 27.942736236088656 20.979420467138382 22 27.02303592646257 22.06214689930316 28.263975945322063 22.650841228912206 23 28.26618806448751 23.702327361160695 26.406690107285424 21.62479446706637 24 31.7451102164841 21.556101107024446 23.204553482569796 23.49423519392166 25 28.607066214609915 20.008770817159174 23.102019405933046 28.28214356229786 26 27.38176399559553 19.957209614058158 23.761607448158166 28.89941894218815 27 28.096031387617636 19.517256765142836 23.882391507909855 28.504320339329663 28 28.362074017036615 24.62035681482139 20.626716892753873 26.390852275388127 29 31.9877608623876 24.196700694864283 19.957750877258214 23.857787565489904 30 30.044920138968152 23.71147000260512 23.644659297172087 22.59895056125464 31 31.150873822370123 23.644188633519867 22.262390750141375 22.94254679396863 32 32.734868810743556 23.777857110751157 21.68008567961125 21.807188398894034 33 33.24572713886625 24.099579250228096 21.618122809796112 21.03657080110954 34 26.870034939716227 25.486648566511484 26.824380565450607 20.818935928321693 35 25.548552603370094 30.388669337369116 24.716713431022715 19.34606462823808 36 26.258219258191723 31.812109187378024 21.43761153257734 20.492060021852915 37 28.354261000409714 29.809305914665384 20.782471261865727 21.05396182305918 38 29.30963761487429 29.308719820752454 20.07995869455788 21.301683869815374 39 29.117548011810833 27.44657438050662 20.597335714263863 22.838541893418686 40 27.479026639327387 26.233768281458747 21.296400670319173 24.990804408894697 41 23.494588191660828 28.32858629818096 22.18947318382075 25.987352326337465 42 23.098960092193597 27.369232575855097 22.941217169151106 26.590590162800204 43 23.91672642133951 24.731233404693786 23.031643423334422 28.320396750632277 44 24.241307842503705 24.56723065507673 22.983012101468496 28.208449400951068 45 26.941234583706237 25.136215944248946 21.729952493564262 26.19259697848055 46 25.831927421782176 28.686996669348662 21.41276049173997 24.06831541712919 47 24.835556003208985 26.576634985511795 23.33005594543502 25.257753065844195 48 25.11503607989892 26.027288137228577 25.449089607064096 23.408586175808406 49 27.874760638116364 25.858696417002346 23.077744928069652 23.188798016811635 50 24.12286533442182 26.701066688568215 22.861121982134076 26.31494599487588 51 22.772896080524905 27.300633348543613 25.087949386713493 24.83852118421799 52 23.339657483940368 26.41823313335619 23.911149057060673 26.330960325642767 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 127.5 6 255.0 7 711.5 8 1168.0 9 11563.0 10 21958.0 11 27827.5 12 33697.0 13 25703.0 14 19289.0 15 20869.0 16 19320.5 17 17772.0 18 19263.5 19 20755.0 20 21184.5 21 21614.0 22 23506.5 23 25399.0 24 28761.5 25 32124.0 26 40220.5 27 48317.0 28 54298.5 29 60280.0 30 76816.0 31 93352.0 32 114643.5 33 135935.0 34 165868.5 35 195802.0 36 208174.5 37 220547.0 38 199635.0 39 182727.0 40 186731.0 41 202384.0 42 218037.0 43 227305.5 44 236574.0 45 250612.0 46 264650.0 47 279043.5 48 293437.0 49 306354.5 50 319272.0 51 338872.0 52 358472.0 53 402189.5 54 445907.0 55 502697.0 56 559487.0 57 632920.0 58 706353.0 59 719340.5 60 732328.0 61 758730.5 62 785133.0 63 750001.5 64 590222.5 65 465575.0 66 403468.5 67 341362.0 68 286128.5 69 230895.0 70 203350.5 71 175806.0 72 154892.0 73 133978.0 74 115901.0 75 97824.0 76 75514.5 77 53205.0 78 36585.5 79 19966.0 80 13902.5 81 7839.0 82 5716.5 83 3594.0 84 2145.5 85 697.0 86 449.5 87 202.0 88 131.5 89 49.5 90 38.0 91 37.5 92 37.0 93 34.5 94 32.0 95 16.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 8498638.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.418031153374175 #Duplication Level Percentage of deduplicated Percentage of total 1 71.90500704417914 7.491086034698477 2 9.858094045527425 2.054038617583943 3 4.124586462113556 1.2891021077125318 4 2.275191687269802 0.9481207151149899 5 1.2860029973952831 0.6698809645098313 6 0.810260873719803 0.5064793814863852 7 0.5708030135625963 0.41626505044144935 8 0.4178631510062405 0.34826490600240884 9 0.3374962153573224 0.3164441477164618 >10 4.109868303988332 11.103765502809743 >50 2.2962143090416647 17.218678793725832 >100 1.8704088180966831 34.486411285200695 >500 0.08775001395207678 6.1445032061197935 >1k 0.044960705838217575 8.556853522949435 >5k 0.0033209612266865253 2.506443236847143 >10k+ 0.0021713977251411895 5.943662527080925 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TAGTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 99006 1.164963138799417 No Hit TAGTCGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 54027 0.6357136284661142 No Hit TAGTCGGGGGAGTGCAGTGCTTAGTCGGGGAAAAAAAAAAAAAAAAAAAAAA 38558 0.4536962275602279 No Hit TAGTCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 35038 0.412277826164616 No Hit TAGTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 30955 0.3642348338639674 No Hit TAGTCGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 26055 0.3065785364666668 No Hit TAGTCGGGGGAGTGCAGTGCTTAGTCGGGAAAAAAAAAAAAAAAAAAAAAAA 22236 0.261641924270689 No Hit TAGTCGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 19327 0.2274129101627814 No Hit TAGTCGGGGAGTGCAGTGCTTAGTCGGGGAAAAAAAAAAAAAAAAAAAAAAA 18857 0.22188261224916275 No Hit TAGTCGGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTAGTCGGGGAAG 18127 0.21329300059609552 No Hit TAGTCGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 17079 0.20096161290785652 No Hit TAGTCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 12287 0.14457610737155766 No Hit TAGTCGGGGGGGCTGATGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 11747 0.138222148066549 No Hit TAGTCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 11441 0.13462157112704412 No Hit TAGTCGGGGGTGCAGTGCTTAGTCGGGGAAAAAAAAAAAAAAAAAAAAAAAA 10987 0.12927953867431463 No Hit TAGTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 10502 0.12357274189111243 No Hit TAGTCGGGGAGTGCAGTGCTTAGTCGGGAAAAAAAAAAAAAAAAAAAAAAAA 10432 0.12274908049972241 No Hit TAGTCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 9673 0.11381823769879362 No Hit TAGTCGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 9493 0.11170025126379074 No Hit TAGTCGGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 9457 0.11127665397679017 No Hit TAGTCGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 8591 0.10108678590616521 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.001812055061058019 0.0 0.0 0.0 0.0 8 0.002859281687253887 0.0 0.0 0.0 0.0 9 0.0065892911311200685 0.0 0.0 0.0 0.0 10 0.021356363219612366 0.0 0.0 0.0 0.0 11 0.043889385569781884 0.0 0.0 0.0 0.0 12 0.05207893311845969 0.0 0.0 0.0 0.0 13 0.05983311678883134 0.0 0.0 0.0 0.0 14 0.08996735712240009 0.0 0.0 0.0 0.0 15 0.10602875425450525 0.0 0.0 0.0 0.0 16 0.12969136937000963 0.0 0.0 0.0 0.0 17 0.14117556248424748 0.0 0.0 0.0 0.0 18 0.1527538883289299 0.0 0.0 0.0 0.0 19 0.16890941819147962 0.0 0.0 0.0 0.0 20 0.18134670520146876 0.0 0.0 0.0 0.0 21 0.19404285722018047 0.0 0.0 0.0 0.0 22 0.2062683455866693 0.0 0.0 0.0 0.0 23 0.21974109263154873 0.0 0.0 0.0 0.0 24 0.23247254442417714 0.0 0.0 0.0 0.0 25 0.24339194115574755 0.0 0.0 0.0 0.0 26 0.2556056629309308 0.0 0.0 0.0 0.0 27 0.26886661133230993 0.0 0.0 0.0 0.0 28 0.3036015888663572 0.0 0.0 3.529977391671466E-5 0.0 29 0.31561527858934574 0.0 0.0 3.529977391671466E-5 0.0 30 0.3341005935303986 0.0 0.0 3.529977391671466E-5 0.0 31 0.3491618304015302 0.0 0.0 3.529977391671466E-5 0.0 32 0.3643642663683287 0.0 0.0 3.529977391671466E-5 0.0 33 0.3792019380046544 0.0 0.0 3.529977391671466E-5 0.0 34 0.39916984345020934 0.0 0.0 3.529977391671466E-5 0.0 35 0.45330793004714404 0.0 0.0 3.529977391671466E-5 0.0 36 0.4742406959797558 0.0 0.0 3.529977391671466E-5 0.0 37 0.49360850526872657 0.0 0.0 3.529977391671466E-5 0.0 38 0.5115407904184176 0.0 0.0 3.529977391671466E-5 0.0 39 0.5311203983508886 0.0 0.0 3.529977391671466E-5 0.0 40 0.5520531642835005 0.0 0.0 3.529977391671466E-5 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGGGG 175965 0.0 43.285202 5 TCGGGGG 432670 0.0 42.75522 4 CGGGGGC 82185 0.0 42.510193 5 CGGGGAT 54145 0.0 42.457287 5 TCGGGGC 92995 0.0 41.72869 4 CGGGGGT 66330 0.0 41.669075 5 GTCGGGG 843605 0.0 41.547523 3 AGTCGGG 928355 0.0 41.121304 2 CGGGGAC 37130 0.0 41.038242 5 TAGTCGG 946695 0.0 41.01539 1 CGGGGAG 82090 0.0 40.8755 5 CGGGGGA 113315 0.0 40.811985 5 TCGGGGT 72050 0.0 39.915615 4 CGGGGCA 40005 0.0 39.537807 5 CGGGGCT 34825 0.0 39.402153 5 TCGGGAT 7025 0.0 39.288258 4 GTCGGGT 24445 0.0 39.197384 3 TCGGGGA 251780 0.0 38.90031 4 CGGGGTC 14395 0.0 38.474472 5 CGGGGTG 33090 0.0 38.31248 5 >>END_MODULE