##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527088_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8297135 Sequences flagged as poor quality 0 Sequence length 52 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.273330131424885 33.0 31.0 34.0 31.0 34.0 2 32.594184378101595 34.0 31.0 34.0 31.0 34.0 3 32.88303830177525 34.0 31.0 34.0 31.0 34.0 4 35.810314162659765 37.0 35.0 37.0 35.0 37.0 5 36.21568577587324 37.0 35.0 37.0 35.0 37.0 6 36.262215330954604 37.0 37.0 37.0 35.0 37.0 7 36.61666695793186 37.0 37.0 37.0 35.0 37.0 8 36.64605637970215 37.0 37.0 37.0 35.0 37.0 9 38.45723035722572 39.0 39.0 39.0 37.0 39.0 10 37.89576835859607 39.0 38.0 39.0 35.0 39.0 11 36.654358643073785 39.0 35.0 39.0 33.0 39.0 12 36.5992834876135 39.0 35.0 39.0 33.0 39.0 13 36.39299288248293 39.0 35.0 39.0 33.0 39.0 14 37.135690813756796 40.0 35.0 40.0 33.0 40.0 15 37.333918997340646 40.0 35.0 40.0 33.0 40.0 16 37.40547429926113 40.0 35.0 40.0 33.0 40.0 17 37.30749023608752 40.0 35.0 40.0 33.0 40.0 18 37.276266205141894 40.0 35.0 40.0 33.0 40.0 19 37.20045907412619 40.0 35.0 40.0 33.0 40.0 20 37.170685302818384 40.0 35.0 40.0 33.0 40.0 21 32.90141826064057 38.0 33.0 40.0 10.0 40.0 22 33.50288949137263 38.0 33.0 40.0 16.0 40.0 23 35.4625867844744 38.0 33.0 40.0 27.0 40.0 24 36.323077905807246 38.0 35.0 40.0 31.0 40.0 25 36.64649195173997 38.0 35.0 40.0 32.0 40.0 26 36.73287357624047 38.0 35.0 40.0 32.0 40.0 27 36.685396947259505 38.0 35.0 40.0 32.0 40.0 28 36.538173477953535 38.0 35.0 40.0 32.0 40.0 29 36.42132663865298 38.0 35.0 40.0 32.0 40.0 30 36.199204665224805 38.0 35.0 40.0 31.0 40.0 31 35.92057619889275 38.0 35.0 40.0 31.0 40.0 32 35.84785374710668 37.0 35.0 40.0 31.0 40.0 33 35.51113848334395 37.0 34.0 40.0 30.0 40.0 34 35.05059360851668 37.0 34.0 40.0 27.0 40.0 35 35.03439307664634 36.0 34.0 40.0 28.0 40.0 36 34.930457923126475 36.0 34.0 40.0 29.0 40.0 37 34.80429304814252 35.0 34.0 39.0 29.0 40.0 38 34.687527682748325 35.0 34.0 39.0 29.0 40.0 39 34.45247498082169 35.0 34.0 39.0 28.0 40.0 40 29.780704544399963 35.0 27.0 38.0 8.0 40.0 41 30.496101967727416 35.0 27.0 38.0 11.0 40.0 42 32.15071624120856 35.0 29.0 38.0 21.0 40.0 43 33.0451235275791 35.0 31.0 37.0 24.0 40.0 44 33.78654077582202 35.0 33.0 38.0 26.0 40.0 45 34.03892415876083 35.0 33.0 39.0 27.0 40.0 46 34.06426157944881 35.0 34.0 38.0 27.0 40.0 47 34.006211300647756 35.0 34.0 38.0 27.0 40.0 48 33.86717186113038 35.0 33.0 38.0 26.0 40.0 49 33.75109914446372 35.0 33.0 37.0 27.0 40.0 50 33.62482615987326 35.0 33.0 37.0 27.0 40.0 51 33.44003622937315 35.0 33.0 37.0 26.0 40.0 52 33.061595719486306 35.0 33.0 36.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 7.0 12 8.0 13 36.0 14 49.0 15 202.0 16 566.0 17 1394.0 18 2943.0 19 5310.0 20 9190.0 21 15168.0 22 23339.0 23 33836.0 24 47553.0 25 63594.0 26 85628.0 27 111638.0 28 141424.0 29 171861.0 30 220759.0 31 316177.0 32 432158.0 33 539638.0 34 1065370.0 35 941904.0 36 1126466.0 37 1139891.0 38 1329583.0 39 471443.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 100.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 0.0 100.0 6 100.0 0.0 0.0 0.0 7 99.35552452744231 0.4056219405855154 0.16534623095803552 0.07350730101414524 8 98.28123804180599 1.2170827641107442 0.2322729472281697 0.2694062468550891 9 91.34070977512117 4.229230933328191 2.6266295534542947 1.8034297380963429 10 51.57790008237784 28.495751846872448 8.67423514261248 11.252112928137242 11 35.53962904062667 27.224662488919364 19.116670995470123 18.119037474983834 12 36.35782712948506 17.07966665602042 24.658704480522495 21.903801733972028 13 25.27749638881373 16.9218893027533 28.639427947116687 29.16118636131629 14 23.548104255264015 20.803723212892162 30.18423829430279 25.463934237541032 15 26.540546827308464 19.997794419398986 27.919842210594382 25.54181654269817 16 31.620396679094654 22.343218472400412 25.031158345621712 21.00522650288322 17 33.45246280794515 19.583615308175652 24.578194762408952 22.385727121470243 18 30.96654447589439 20.490542819901087 24.900968828396792 23.641943875807733 19 30.07779191250956 22.869894246628505 23.426749112796163 23.625564728065772 20 27.867052904406158 23.927825689228875 24.423093031510273 23.782028374854693 21 32.15854629338922 22.540792695309886 26.261558959809623 19.03910205149127 22 27.21015145589411 22.040053584761488 28.146161295435114 22.60363366390929 23 28.204651364597538 23.80598845264058 26.368957477490724 21.620402705271157 24 31.825816983814292 21.607615158726475 23.182074294319666 23.384493563139568 25 28.654396969556363 20.026695961919387 23.062527004803464 28.256380063720794 26 27.442737764300567 19.96547000862346 23.706592697358786 28.885199529717188 27 28.148005305445796 19.527137981966064 23.854053236448486 28.470803476139654 28 28.405202518700733 24.651448964009866 20.591927213429695 26.351421303859706 29 31.874990584099212 24.244356636357008 19.940461376125615 23.94019140341817 30 30.02379737102024 23.801878600263827 23.591757877869888 22.582566150846045 31 31.162347002911243 23.702784153807308 22.254886777182726 22.87998206609872 32 32.68964528117236 23.8325036292648 21.695175503351457 21.782675586211386 33 33.19336132291448 24.163738447066365 21.58389612800081 21.059004102018346 34 26.85353438265136 25.556050371604172 26.744882420257117 20.84553282548735 35 25.539490438567046 30.439458921663924 24.668973085287874 19.352077554481156 36 26.354277711523316 31.770918515849147 21.419188671752355 20.455615100875182 37 28.226924112961882 29.858439087709193 20.788223886920004 21.12641291240892 38 29.35049267006021 29.298667552112867 20.047438061451334 21.303401716375593 39 28.86133587075539 27.508085622326263 20.576825615106902 23.05375289181145 40 28.045777247206416 30.10921239680926 19.709188774197358 22.135821581786967 41 23.519528126274913 28.39122178920796 22.17409985494993 25.915150229567196 42 23.11979978631178 27.456176137907846 22.891865686167577 26.532158389612796 43 23.92436666391471 24.864498408185476 22.990875766153014 28.220259161746796 44 24.266569122956298 24.686521311271903 22.958165680081137 28.088743885690665 45 26.87336050335447 25.22899772029743 21.693777430402182 26.20386434594592 46 25.813054747210934 28.745524810672602 21.374534703846567 24.066885738269896 47 24.689221038346368 26.677811075750846 23.275070250152613 25.35789763575017 48 25.097759648360547 26.116364263085995 25.375445861734203 23.41043022681926 49 27.868667919709633 25.960177820416323 23.018668492196404 23.15248576767764 50 24.04074418458902 26.813725460655995 22.9063405621338 26.239189792621186 51 22.82913318874527 27.412052473534537 24.994097360112857 24.764716977607332 52 23.320820982182404 26.53264048373324 23.873337001266098 26.27320153281826 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 120.5 6 241.0 7 639.0 8 1037.0 9 10769.5 10 20502.0 11 25864.5 12 31227.0 13 24736.5 14 19736.0 15 21226.0 16 19397.0 17 17568.0 18 18985.5 19 20403.0 20 20715.5 21 21028.0 22 22973.0 23 24918.0 24 28039.5 25 31161.0 26 38582.5 27 46004.0 28 51509.0 29 57014.0 30 71789.5 31 86565.0 32 106953.0 33 127341.0 34 156882.5 35 186424.0 36 200537.5 37 214651.0 38 196947.0 39 182081.0 40 184919.0 41 198890.0 42 212861.0 43 222299.0 44 231737.0 45 244568.0 46 257399.0 47 271400.0 48 285401.0 49 297885.5 50 310370.0 51 331158.5 52 351947.0 53 393254.0 54 434561.0 55 483992.5 56 533424.0 57 613309.0 58 693194.0 59 703619.0 60 714044.0 61 735567.0 62 757090.0 63 732996.5 64 586101.5 65 463300.0 66 401436.5 67 339573.0 68 283893.0 69 228213.0 70 200667.0 71 173121.0 72 151984.5 73 130848.0 74 113284.5 75 95721.0 76 74454.5 77 53188.0 78 36642.0 79 20096.0 80 13958.5 81 7821.0 82 5699.5 83 3578.0 84 2143.0 85 708.0 86 450.5 87 193.0 88 118.5 89 40.5 90 37.0 91 30.5 92 24.0 93 22.5 94 21.0 95 10.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 8297135.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.50676149226042 #Duplication Level Percentage of deduplicated Percentage of total 1 71.53638025432848 7.516156853518771 2 9.932473509420827 2.0871626038335895 3 4.12688157150092 1.3008048113569513 4 2.238275172356432 0.9406809355998847 5 1.3126082100767762 0.6895630698029773 6 0.8027052040824748 0.5060299276734472 7 0.597829120517078 0.4396873587680525 8 0.45056371117453836 0.37871723603028684 9 0.34678162229653126 0.32791966158319125 >10 4.347493333017507 11.885109427940806 >50 2.3568712582391025 17.781219228613967 >100 1.8192690997930232 33.75293049907891 >500 0.0833057901331998 5.924927897036128 >1k 0.04329795411325043 8.320938805022712 >5k 0.0032901180937120393 2.5515276132396085 >10k+ 0.0019740708562272233 5.596624070900835 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TAGTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 92581 1.1158188941122449 No Hit TAGTCGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 52982 0.6385577672292906 No Hit TAGTCGGGGGAGTGCAGTGCTTAGTCGGGGAAAAAAAAAAAAAAAAAAAAAA 35050 0.42243497303587324 No Hit TAGTCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 34171 0.41184095473919613 No Hit TAGTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 29147 0.3512899332118858 No Hit TAGTCGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 23601 0.2844475834128286 No Hit TAGTCGGGGGAGTGCAGTGCTTAGTCGGGAAAAAAAAAAAAAAAAAAAAAAA 20379 0.2456149020113569 No Hit TAGTCGGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTAGTCGGGGAAG 18545 0.223510886589166 No Hit TAGTCGGGGAGTGCAGTGCTTAGTCGGGGAAAAAAAAAAAAAAAAAAAAAAA 18380 0.22152224834234951 No Hit TAGTCGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 17920 0.21597816595728525 No Hit TAGTCGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 16991 0.2047815300100577 No Hit TAGTCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 11949 0.1440135661285492 No Hit TAGTCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 11343 0.13670984020387758 No Hit TAGTCGGGGGTGCAGTGCTTAGTCGGGGAAAAAAAAAAAAAAAAAAAAAAAA 11169 0.134612730779962 No Hit TAGTCGGGGAGTGCAGTGCTTAGTCGGGAAAAAAAAAAAAAAAAAAAAAAAA 10541 0.1270438530890482 No Hit TAGTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 9916 0.11951113245716745 No Hit TAGTCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 9849 0.11870362480542983 No Hit TAGTCGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 9299 0.11207483064937475 No Hit TAGTCGGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 9170 0.11052007711095456 No Hit TAGTCGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 8383 0.10103487529129031 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0023863658961798258 0.0 0.0 0.0 0.0 8 0.0038205959044899235 0.0 0.0 0.0 0.0 9 0.007966605340277096 0.0 0.0 0.0 0.0 10 0.024876056614723033 0.0 0.0 0.0 0.0 11 0.04735369498025523 0.0 0.0 0.0 0.0 12 0.056658111504754353 0.0 0.0 0.0 0.0 13 0.0650827062594498 0.0 0.0 0.0 0.0 14 0.09363473054253064 0.0 0.0 0.0 0.0 15 0.11142400358678026 0.0 0.0 0.0 0.0 16 0.13286513959336566 0.0 0.0 0.0 0.0 17 0.1431096396527235 0.0 0.0 0.0 0.0 18 0.15369160559638959 0.0 0.0 0.0 0.0 19 0.16739513096990707 0.0 0.0 0.0 0.0 20 0.1794595363339273 0.0 0.0 0.0 0.0 21 0.19087311463535306 0.0 0.0 0.0 0.0 22 0.20321472411862648 0.0 0.0 0.0 0.0 23 0.21805117067517885 0.0 0.0 0.0 0.0 24 0.2309471883969587 0.0 0.0 0.0 0.0 25 0.24239692375741748 0.0 0.0 0.0 0.0 26 0.25429259617928357 0.0 0.0 0.0 0.0 27 0.26851437273227446 0.0 0.0 0.0 0.0 28 0.3056838294182269 0.0 0.0 0.0 0.0 29 0.31741076889793884 0.0 0.0 0.0 0.0 30 0.3348866807639022 0.0 0.0 0.0 0.0 31 0.3491807714349592 0.0 0.0 4.941464734513781E-4 0.0 32 0.3636676997541923 0.0 0.0 4.941464734513781E-4 0.0 33 0.3778412668951391 0.0 0.0 4.941464734513781E-4 0.0 34 0.3956184875863777 0.0 0.0 4.941464734513781E-4 0.0 35 0.4435868525701944 0.0 0.0 4.941464734513781E-4 0.0 36 0.4615207538505761 0.0 0.0 4.941464734513781E-4 0.0 37 0.4789725610105175 0.0 0.0 4.941464734513781E-4 0.0 38 0.49632794934637076 0.0 0.0 4.941464734513781E-4 0.0 39 0.51494883474838 0.0 0.0 4.941464734513781E-4 0.0 40 0.5387642842981343 0.0 0.0 4.941464734513781E-4 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGGGG 169930 0.0 43.305183 5 TCGGGGG 422665 0.0 42.76548 4 CGGGGAT 51985 0.0 42.65519 5 CGGGGGC 81700 0.0 42.464138 5 TCGGGGC 90860 0.0 41.706802 4 CGGGGGT 65545 0.0 41.67686 5 GTCGGGG 823040 0.0 41.59752 3 AGTCGGG 904980 0.0 41.221996 2 TAGTCGG 920920 0.0 41.177322 1 CGGGGAC 36615 0.0 41.175747 5 CGGGGGA 110595 0.0 40.829964 5 CGGGGAG 81345 0.0 40.800293 5 TCGGGGT 69060 0.0 39.875328 4 TCGGGAT 6765 0.0 39.744274 4 CGGGGCA 39035 0.0 39.62469 5 CGGGGCT 33940 0.0 39.47407 5 GTCGGGT 24365 0.0 39.297764 3 TCGGGGA 246530 0.0 39.01221 4 CGGGGTG 31690 0.0 38.54623 5 CGGGGTC 13705 0.0 37.810287 5 >>END_MODULE