##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527083_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5175148 Sequences flagged as poor quality 0 Sequence length 52 %GC 35 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.701260137874318 33.0 31.0 34.0 28.0 34.0 2 32.01740124147174 33.0 31.0 34.0 30.0 34.0 3 32.091028894246115 34.0 31.0 34.0 30.0 34.0 4 35.69421396257653 37.0 35.0 37.0 35.0 37.0 5 35.94803414317813 37.0 35.0 37.0 35.0 37.0 6 36.17911062640141 37.0 35.0 37.0 35.0 37.0 7 36.332691934607475 37.0 35.0 37.0 35.0 37.0 8 36.4559154636737 37.0 37.0 37.0 35.0 37.0 9 38.47809685829275 39.0 39.0 39.0 37.0 39.0 10 37.64287398157502 39.0 37.0 39.0 35.0 39.0 11 37.236400388935735 39.0 37.0 39.0 34.0 39.0 12 36.18556976534777 38.0 35.0 39.0 31.0 39.0 13 35.80587337792078 38.0 35.0 39.0 31.0 39.0 14 36.688919621235954 39.0 35.0 40.0 31.0 40.0 15 36.950993478833844 40.0 35.0 40.0 32.0 40.0 16 31.981661973725195 38.0 32.0 40.0 6.0 40.0 17 33.76160952305132 38.0 32.0 40.0 17.0 40.0 18 35.741563333067965 38.0 34.0 40.0 27.0 40.0 19 36.228619548658315 38.0 35.0 40.0 30.0 40.0 20 36.777500856014164 39.0 35.0 40.0 31.0 40.0 21 36.99117030083004 39.0 35.0 40.0 32.0 40.0 22 37.1211146038722 40.0 35.0 40.0 32.0 40.0 23 37.15643958395006 40.0 35.0 40.0 32.0 40.0 24 36.81554769061677 39.0 35.0 40.0 32.0 40.0 25 36.384057808588274 38.0 35.0 40.0 31.0 40.0 26 35.80550507927503 37.0 35.0 40.0 30.0 40.0 27 35.60364263978538 37.0 35.0 40.0 30.0 40.0 28 35.4233169756691 36.0 35.0 40.0 30.0 40.0 29 35.19831065700923 36.0 35.0 40.0 30.0 40.0 30 34.87641686769151 35.0 35.0 40.0 26.0 40.0 31 34.6539053569096 35.0 35.0 40.0 25.0 40.0 32 34.23860399741225 35.0 34.0 40.0 23.0 40.0 33 33.80945433831071 35.0 33.0 40.0 21.0 40.0 34 33.568168678460985 35.0 33.0 40.0 20.0 40.0 35 33.35191090187179 35.0 33.0 40.0 19.0 40.0 36 32.91190319581199 35.0 33.0 40.0 16.0 40.0 37 31.943214377637123 35.0 31.0 40.0 12.0 40.0 38 31.316282935289966 35.0 30.0 40.0 10.0 40.0 39 30.234197553383982 35.0 24.0 39.0 9.0 40.0 40 29.53088375443562 35.0 21.0 39.0 8.0 40.0 41 28.867974983517378 35.0 18.0 39.0 8.0 40.0 42 28.42401608611 35.0 15.0 39.0 8.0 40.0 43 27.916718517035648 35.0 15.0 38.0 8.0 40.0 44 27.63078292640133 35.0 12.0 38.0 8.0 40.0 45 27.44982288429239 35.0 10.0 38.0 8.0 40.0 46 27.110343510948866 34.0 10.0 37.0 8.0 40.0 47 26.689336420910088 34.0 10.0 37.0 8.0 40.0 48 26.520288308662863 33.0 10.0 36.0 8.0 40.0 49 26.349986319231835 33.0 10.0 35.0 8.0 40.0 50 25.787768388459614 33.0 10.0 35.0 8.0 40.0 51 25.67519015881285 33.0 10.0 35.0 8.0 40.0 52 25.25009410358892 33.0 9.0 35.0 8.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 4.0 11 15.0 12 25.0 13 41.0 14 167.0 15 586.0 16 2122.0 17 4913.0 18 8974.0 19 14634.0 20 22739.0 21 32627.0 22 45826.0 23 67470.0 24 96331.0 25 133099.0 26 187627.0 27 261273.0 28 329153.0 29 335594.0 30 261762.0 31 196688.0 32 195570.0 33 233312.0 34 324026.0 35 408272.0 36 620099.0 37 643661.0 38 658047.0 39 90491.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 100.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 99.35704254255144 0.538573969285516 0.06146684114154803 0.04291664702149581 8 98.5653357160027 0.9857302631731499 0.27831088115740843 0.17062313966673032 9 96.46381127650841 2.013430340542918 0.754529145833124 0.7682292371155376 10 61.46119879083651 26.100065157556845 4.590458089314548 7.848277962292093 11 46.25177869309245 34.19967892705677 8.937193680258034 10.611348699592746 12 37.84653115234578 38.971368548300454 10.162820464264984 13.019279835088774 13 24.81457535127498 45.609420252329016 12.26326280910227 17.312741587293733 14 21.61279252303509 56.168326007294866 9.208548238620422 13.010333231049623 15 26.41275186719298 53.363420717629715 8.436454377729873 11.78737303744743 16 21.667438303213743 55.89357058001047 14.877101099330877 7.561890017444911 17 28.338184724378895 53.03873435117218 9.349819560715945 9.27326136373298 18 25.411910925059534 51.50967663147025 12.221273671786777 10.857138771683438 19 19.869267506938932 52.10805565367406 18.247323554804616 9.775353284582392 20 20.619854736521546 55.856450868651486 10.48134275580138 13.04235163902559 21 18.088680748840417 50.56487273407446 18.548416393115712 12.7980301239694 22 17.132089748930852 55.49476072954822 11.961706215938172 15.41144330558276 23 17.98107029982524 58.61550239722612 12.178840102737158 11.224587200211472 24 15.450128189570616 55.853243230918224 18.797800565317164 9.89882801419399 25 18.048546630936933 56.26505754038339 12.631194315602182 13.055201513077499 26 19.729580680591162 56.21837288518125 12.946721523712945 11.105324910514637 27 15.565641794205693 55.84534007529833 16.398564833314914 12.190453297181065 28 19.757328679295743 60.143149529250174 12.685376340927835 7.414145450526245 29 24.33426058539775 56.082318805182 11.91268346335216 7.6707371460680935 30 20.547335071383465 57.68977041816002 13.16480224333681 8.598092267119704 31 26.085456879687307 53.84406397652782 11.402282601386473 8.668196542398402 32 22.438334130734038 54.65333551813397 14.84587493922879 8.062455411903196 33 27.129388376912118 52.75910949793127 10.903765457528944 9.20773666762767 34 24.91287205699238 50.83365731762647 11.94690470687988 12.306565918501269 35 25.781059788048573 52.877676155348595 12.088910307492656 9.25235374911017 36 27.689778147407573 50.46640212028719 12.122416595622001 9.721403136683241 37 23.862177468161295 51.242553836141504 14.60758223726162 10.287686458435585 38 25.845656974447877 50.99562370003717 12.844328316794032 10.31439100872091 39 23.595247904021296 49.51773359911639 12.689511488367097 14.197507008495217 40 24.068374469677003 49.4151664841276 15.778157455593542 10.738301590601854 41 23.782720803347075 50.459928875464044 13.408737296015497 12.348613025173387 42 24.76702115572347 50.74898341071599 13.72671854022339 10.757276893337158 43 26.07098386364989 48.071572059388444 15.176358241348847 10.681085835612818 44 25.121407155891966 52.83721354442423 11.953319982346398 10.088059317337397 45 24.836816261100168 52.67397183616778 12.442194889885275 10.047017012846782 46 23.629816963688768 54.15659610121295 12.418079637529207 9.795507297569074 47 26.817745115695242 50.496836032515404 11.924064780369566 10.761354071419793 48 25.36907157051354 51.755060918064565 11.747973198061196 11.1278943133607 49 25.150932881533052 52.52027574863559 11.317608694475984 11.011182675355371 50 21.935894393744874 54.35100600021487 11.722911112880249 11.990188493160002 51 20.46061291387222 54.47836467672036 13.372525771243643 11.688496638163778 52 23.474517057289958 51.44815182097208 13.003106384590355 12.074224737147613 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1452.0 1 1028.5 2 605.0 3 1733.5 4 2862.0 5 28275.0 6 53688.0 7 59472.5 8 65257.0 9 105714.0 10 146171.0 11 113159.5 12 80148.0 13 63735.0 14 48609.5 15 49897.0 16 57775.5 17 65654.0 18 83664.0 19 101674.0 20 122179.0 21 142684.0 22 167384.0 23 192084.0 24 217163.0 25 242242.0 26 256593.5 27 270945.0 28 272143.5 29 273342.0 30 258551.5 31 243761.0 32 247130.0 33 250499.0 34 266470.5 35 282442.0 36 257092.5 37 231743.0 38 217759.5 39 219815.5 40 235855.0 41 275899.0 42 315943.0 43 361915.0 44 407887.0 45 381469.0 46 355051.0 47 340049.5 48 325048.0 49 296732.5 50 268417.0 51 208554.0 52 148691.0 53 107893.0 54 67095.0 55 52869.5 56 38644.0 57 30753.5 58 22863.0 59 18264.0 60 13665.0 61 11874.0 62 10083.0 63 8007.0 64 5058.5 65 4186.0 66 3406.5 67 2627.0 68 2120.0 69 1613.0 70 1379.5 71 1146.0 72 1331.0 73 1516.0 74 920.0 75 324.0 76 239.0 77 154.0 78 116.5 79 79.0 80 57.5 81 36.0 82 31.0 83 26.0 84 20.5 85 15.0 86 9.0 87 3.0 88 2.5 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 5175148.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.68378509553435 #Duplication Level Percentage of deduplicated Percentage of total 1 78.1279026502254 24.753876775345702 2 9.514796172742795 6.02929514329991 3 3.9444073845517242 3.749212677041267 4 2.158516419586716 2.735598814534711 5 1.2744001718216769 2.018891058485503 6 0.906448848488847 1.7231838309369123 7 0.6039346590082524 1.33944551634336 8 0.4515724117237305 1.1446018598501468 9 0.34528763288705633 0.9846017240885327 >10 2.2340894338899147 13.473610454872839 >50 0.23564359080172578 5.244735740847533 >100 0.16840411685479442 10.28575380367224 >500 0.018841592340726916 4.004751350590175 >1k 0.012732543612908152 7.637932866918934 >5k 0.0018005617230375164 3.9391250697125693 >10k+ 0.0012218097406326003 10.935383313459782 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AATAAAGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 101600 1.9632288777055265 No Hit AATAAAGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTAATAAAGGGAAG 67637 1.306957791352054 No Hit AATAAAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 42264 0.816672296135299 No Hit AATAAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 39955 0.7720552146527984 No Hit AATAAAGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 31114 0.6012195206784424 No Hit AATAAAGGGAACGCAGAGTGCAGTGCTAATAAAGGGGGAAAAAAAAAAAAAA 27260 0.5267482205339828 No Hit AATAAAGGGGAGTGCAGTGCTAATAAAGGGGGAAAAAAAAAAAAAAAAAAAA 23621 0.45643139094765983 No Hit AATAAAGGGAACGCAGAGTGCAGTGCTAATAAAGGGAACGCAGAGTGCAGTG 23545 0.45496283391315573 No Hit AATAAAGGGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA 23222 0.4487214665165131 Illumina Single End Adapter 2 (97% over 34bp) AATAAAGGGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 21455 0.414577515464292 No Hit AATAAAGGGGCAGAGTGCAGTGCTAATAAAGGGGGAAAAAAAAAAAAAAAAA 18874 0.36470454564777666 No Hit AATAAAGGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA 18758 0.3624630638582703 Illumina Single End Adapter 2 (97% over 34bp) AATAAAGGGGAGTGCAGTGCTAATAAAGGGGAGTGCAGTGCTAATAAAGGGG 16914 0.32683123265267006 No Hit AATAAAGGGACGCAGAGTGCAGTGCTAATAAAGGGGGAAAAAAAAAAAAAAA 16853 0.3256525224012917 No Hit AATAAAGGGCGCAGAGTGCAGTGCTAATAAAGGGGGAAAAAAAAAAAAAAAA 15203 0.293769376257452 No Hit AATAAAGGGGCAGAGTGCAGTGCTAATAAAGGGGCAGAGTGCAGTGCTAATA 14346 0.27720946338153035 No Hit AATAAAGGGAGAGTGCAGTGCTAATAAAGGGAGAGTGCAGTGCTAATAAAGG 12063 0.23309478298978117 No Hit AATAAAGGGGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAA 11751 0.22706596990076422 Illumina Single End Adapter 2 (97% over 34bp) AATAAAGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 10284 0.19871895451105942 Illumina Single End Adapter 2 (97% over 34bp) AATAAAGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 9417 0.18196581044638724 No Hit AATAAAGGGCAGAGTGCAGTGCTAATAAAGGGGGAAAAAAAAAAAAAAAAAA 8997 0.1738501005188644 No Hit AATAAAGGGAACGCAGAGTGCAGTGCTAATAAAGGGGAAAAAAAAAAAAAAA 8857 0.17114486387635677 No Hit AATAAAGGGGTGCAGTGCTAATAAAGGGGGAAAAAAAAAAAAAAAAAAAAAA 8711 0.1683236885205988 No Hit AATAAAGGGGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 8511 0.16445906474558794 No Hit AATAAAGGGAACGCAGAGTGCAGTGCTAATAAAGGGGGGAAAAAAAAAAAAA 8283 0.16005339364207555 No Hit AATAAAGGGGAGTGCAGTGCTAATAAAGGGGGGAAAAAAAAAAAAAAAAAAA 8274 0.15987948557220005 No Hit AATAAAGGGGAGTGCAGTGCTAATAAAGGGGAAAAAAAAAAAAAAAAAAAAA 7841 0.15151257509930152 No Hit AATAAAGGAGAGTGCAGTGCTAATAAAGGGGAGTGCAGTGCTAATAAAGGGG 7819 0.1510874664840503 No Hit AATAAAGGGAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA 7364 0.14229544739590055 Illumina Single End Adapter 2 (100% over 34bp) AATAAAGGGAACGCAGAGTGCAGTGCTAATAAAGGGGGTAAAAAAAAAAAAA 7278 0.1406336591726459 No Hit AATAAAGGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 7159 0.1383342080265144 No Hit AATAAAGGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 7119 0.13756128327151224 No Hit AATAAAGGGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 7026 0.13576423321613218 No Hit AATAAAGGGAGTGCAGTGCTAATAAAGGGGGAAAAAAAAAAAAAAAAAAAAA 6557 0.12670169046373167 No Hit AATAAAGGGGAGTGCAGTGCTAATAAAGGGGGTAAAAAAAAAAAAAAAAAAA 6358 0.12285638980759585 No Hit AATAAAGGGAGAGTGCAGTGCTAATAAAGGGGGAAAAAAAAAAAAAAAAAAA 6331 0.12233466559796936 No Hit AATAAAGGGCAACGCAGAGTGCAGTGCTAATAAAGGGGGAAAAAAAAAAAAA 6177 0.11935890529121099 No Hit AATAAAGGGGCAGAGTGCAGTGCTAATAAAGGGGGGAAAAAAAAAAAAAAAA 5949 0.1149532341876986 No Hit AATAAAGGGCGCAGAGTGCAGTGCTAATAAAGGGCGCAGAGTGCAGTGCTAA 5919 0.11437354062144697 No Hit AATAAAGGGGCAGAGTGCAGTGCTAATAAAGGGGAAAAAAAAAAAAAAAAAA 5898 0.11396775512507082 No Hit AATAAAGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAA 5741 0.11093402546168728 Illumina Single End Adapter 2 (97% over 34bp) AATAAAGGGAAGCAGAGGTATCAACGCAGAGTGCAGTGCTAATAAAGGGAAG 5654 0.10925291411955755 No Hit AATAAAGGGACGCAGAGTGCAGTGCTAATAAAGGGGAAAAAAAAAAAAAAAA 5589 0.10799691139267902 No Hit AATAAAGGGACGCAGAGTGCAGTGCTAATAAAGGGGGGAAAAAAAAAAAAAA 5236 0.1011758504297848 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.37309077923955025 0.0 0.0 0.0 0.0 7 0.37562210781218236 0.0 0.0 0.0 0.0 8 0.3877570264657165 0.0 0.0 0.0 0.0 9 0.43722421078585577 0.0 0.0 0.0 0.0 10 0.7149167521392625 0.0 0.0 0.0 0.0 11 1.0193138437779943 0.0 0.0 0.0 0.0 12 1.3431113467672808 0.0 0.0 0.0 0.0 13 1.6271225479928304 0.0 0.0 0.0 0.0 14 2.0094497780546567 0.0 0.0 0.0 0.0 15 2.2642444235411237 0.0 0.0 0.0 0.0 16 2.5128170247498236 0.0 0.0 0.0 0.0 17 2.7219897865722875 0.0 0.0 0.0 0.0 18 2.9043034131584258 0.0 0.0 0.0 0.0 19 3.0850325439968094 0.0 0.0 0.0 1.9323118875054394E-5 20 3.26116277254293 0.0 0.0 0.0 1.9323118875054394E-5 21 3.417738004787496 0.0 0.0 0.0 1.9323118875054394E-5 22 3.5960710688853728 0.0 0.0 0.0 1.9323118875054394E-5 23 3.811040766370353 0.0 0.0 0.0 1.9323118875054394E-5 24 3.9944558107323695 0.0 0.0 0.0 1.9323118875054394E-5 25 4.180846615401144 0.0 0.0 0.0 1.9323118875054394E-5 26 4.3802998484294555 0.0 0.0 0.0 1.9323118875054394E-5 27 4.596216378739314 0.0 0.0 0.0 1.9323118875054394E-5 28 4.845774459010641 0.0 0.0 0.0 1.9323118875054394E-5 29 4.9998570089203245 0.0 0.0 0.0 1.9323118875054394E-5 30 5.184102947393968 0.0 0.0 0.0 1.9323118875054394E-5 31 5.298070702519039 0.0 0.0 0.0 1.9323118875054394E-5 32 5.40664730747797 0.0 0.0 0.0 1.9323118875054394E-5 33 5.514972711891525 0.0 0.0 0.0 1.9323118875054394E-5 34 5.62704680136684 0.0 0.0 0.0 1.9323118875054394E-5 35 5.830654504953288 0.0 0.0 0.0 1.9323118875054394E-5 36 5.923134951889299 0.0 0.0 0.0 1.9323118875054394E-5 37 6.018320635467816 0.0 0.0 0.0 1.9323118875054394E-5 38 6.119052054163475 0.0 0.0 0.0 1.9323118875054394E-5 39 6.227821890311156 0.0 0.0 0.0 1.9323118875054394E-5 40 6.341750999198477 0.0 0.0 0.0 3.864623775010879E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATATTA 20 6.3135143E-4 46.0 14 CGTGATT 25 3.4188262E-5 46.0 18 ACACAAT 20 6.3135143E-4 46.0 44 CCTCGAG 20 6.3135143E-4 46.0 46 ACTACGA 40 5.6188583E-9 46.0 34 TTGCGTA 40 5.6188583E-9 46.0 35 ACTAAAT 25 3.4188262E-5 46.0 18 GCGTCGC 25 3.4188262E-5 46.0 27 CGGTAAT 190 0.0 44.78947 37 AGAGGTA 2540 0.0 42.559055 14 CGCGCAC 65 0.0 42.461536 43 TTATCCG 190 0.0 42.36842 33 GAAGCAG 30740 0.0 41.95966 9 TACCGAC 55 4.7293724E-11 41.81818 35 GGAAGCA 32515 0.0 41.791172 8 GGGAAGC 33895 0.0 41.73182 7 GAGGTAT 2560 0.0 41.6875 15 CTAACCG 50 8.731149E-10 41.4 20 TAACCGG 50 8.731149E-10 41.4 21 AAGCAGT 25395 0.0 41.163616 10 >>END_MODULE