##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527072_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5678250 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.327078237132916 33.0 31.0 34.0 31.0 34.0 2 31.606352661471405 31.0 31.0 34.0 30.0 34.0 3 32.52903236032228 34.0 31.0 34.0 31.0 34.0 4 36.38270364989213 37.0 37.0 37.0 35.0 37.0 5 36.48472821732048 37.0 37.0 37.0 35.0 37.0 6 36.256277021969794 37.0 37.0 37.0 35.0 37.0 7 36.4539997358341 37.0 37.0 37.0 35.0 37.0 8 36.636280544181744 37.0 37.0 37.0 35.0 37.0 9 38.75434790648527 39.0 39.0 39.0 39.0 39.0 10 38.26802183771409 39.0 39.0 39.0 37.0 39.0 11 37.96763914938582 39.0 38.0 39.0 35.0 39.0 12 37.277306212301326 39.0 35.0 39.0 35.0 39.0 13 37.12804015321622 39.0 35.0 39.0 35.0 39.0 14 37.6791830229384 40.0 36.0 40.0 33.0 40.0 15 37.72700250957601 40.0 36.0 40.0 33.0 40.0 16 37.64188156562321 40.0 36.0 40.0 33.0 40.0 17 37.538972218553255 40.0 36.0 40.0 33.0 40.0 18 37.58640426187646 40.0 36.0 40.0 33.0 40.0 19 37.57638973275217 40.0 36.0 40.0 33.0 40.0 20 37.34013560516004 40.0 36.0 40.0 33.0 40.0 21 37.54701413287545 40.0 36.0 40.0 33.0 40.0 22 37.43718011711355 40.0 36.0 40.0 33.0 40.0 23 37.52942984194074 40.0 35.0 40.0 34.0 40.0 24 37.62102144146524 40.0 36.0 40.0 34.0 40.0 25 37.581721304979524 40.0 35.0 40.0 34.0 40.0 26 37.461231541408004 40.0 35.0 40.0 34.0 40.0 27 37.32083405978955 39.0 35.0 40.0 34.0 40.0 28 37.172226478228325 39.0 35.0 40.0 33.0 40.0 29 37.37893136089464 40.0 35.0 40.0 34.0 40.0 30 37.40488865407476 40.0 35.0 40.0 34.0 40.0 31 37.367863514286974 40.0 35.0 40.0 34.0 40.0 32 36.67420613745432 40.0 35.0 40.0 32.0 40.0 33 36.87687438911637 39.0 35.0 40.0 32.0 40.0 34 36.653937921014396 39.0 35.0 40.0 31.0 40.0 35 36.71726852463347 39.0 35.0 40.0 31.0 40.0 36 36.6231904195835 39.0 35.0 40.0 31.0 40.0 37 36.61593202130938 39.0 35.0 40.0 31.0 40.0 38 36.41453053317483 39.0 35.0 40.0 31.0 40.0 39 36.379927090212654 39.0 35.0 40.0 31.0 40.0 40 36.260086998635146 39.0 35.0 40.0 31.0 40.0 41 36.08623625236648 39.0 35.0 40.0 31.0 40.0 42 36.012628186501125 39.0 35.0 40.0 30.0 40.0 43 35.93617382115969 38.0 35.0 40.0 30.0 40.0 44 35.76565684850086 38.0 35.0 40.0 30.0 40.0 45 35.661055606921146 38.0 35.0 40.0 29.0 40.0 46 35.39960005283318 38.0 35.0 40.0 29.0 40.0 47 35.28723796944481 38.0 35.0 40.0 28.0 40.0 48 35.203112578699425 37.0 35.0 40.0 28.0 40.0 49 34.96890186236957 37.0 34.0 40.0 27.0 40.0 50 34.59976559679479 36.0 34.0 40.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 4.0 12 4.0 13 6.0 14 15.0 15 45.0 16 129.0 17 349.0 18 804.0 19 1622.0 20 2738.0 21 4508.0 22 7015.0 23 10857.0 24 15682.0 25 21704.0 26 29310.0 27 39325.0 28 53716.0 29 75498.0 30 104781.0 31 138284.0 32 164383.0 33 218507.0 34 480015.0 35 501338.0 36 429236.0 37 734006.0 38 1737012.0 39 907356.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 99.69097873464536 0.27196759565006823 0.026592700215735482 0.01046096948883899 8 99.52474794170739 0.4347290098181658 0.025219037555584908 0.015304010918857042 9 98.80889358517149 0.6651521155285519 0.1817285255140228 0.3442257737859376 10 59.51833751596002 24.65949896535024 5.746118962708581 10.076044555981156 11 38.169436005811654 22.824285651389072 19.317589045920837 19.68868929687844 12 35.663082816008455 14.833126403381325 26.289719543873552 23.21407123673667 13 26.872082067538415 15.050552546999516 28.25560692114648 29.82175846431559 14 23.183480825958704 16.994461321710034 34.433284902919034 25.388772949412232 15 28.055721393034826 17.955919517456962 30.412257297582883 23.576101791925332 16 33.48225245454145 19.12605116012856 26.584986571566944 20.806709813763042 17 31.45183815436094 19.60855897503632 26.17415576982345 22.76544710077929 18 31.009289834015764 20.450138687095496 26.02497248271915 22.515598996169594 19 29.122934002553603 24.115757495707303 24.693646810196803 22.06766169154229 20 30.06457975608682 24.00449082023511 24.676810637080084 21.254118786597985 21 27.625447981332275 25.52113767445956 26.55466032668516 20.298754017523006 22 26.579932197419982 22.034183066966055 30.06966935235328 21.316215383260687 23 29.40976533262889 20.831946462378372 28.406304759388895 21.35198344560384 24 31.771144278606968 20.459507770880112 25.749922951613613 22.01942499889931 25 28.08974596046317 20.167762955135828 24.363509884207282 27.37898120019372 26 24.837599612556684 19.658979439087748 28.753189803196406 26.75023114515916 27 23.022885572139305 18.912252894817946 28.41072513538502 29.654136397657727 28 24.771910359705895 23.36726984546295 25.443208735085634 26.41761105974552 29 29.66442125654911 23.377255316338662 22.973222383656935 23.98510104345529 30 28.906406022982434 19.841570906529302 27.352353277858494 23.899669792629773 31 31.72563730022454 19.637705278915156 26.159749922951615 22.476907497908687 32 34.35861400959803 19.531774754545854 24.59805397789812 21.511557257957996 33 34.29347069959935 19.45639941883503 25.17680623431515 21.073323647250472 34 27.22012944128913 20.602315854356537 32.129370844890595 20.048183859463744 35 25.441993571963195 27.02971866332057 28.064368423369878 19.463919341346365 36 25.472636815920396 28.780768722757895 25.144349051204156 20.602245410117554 37 29.820384801655443 26.992083828644386 22.82661031127548 20.36092105842469 38 27.97788050895963 27.992004578875534 22.7510588649672 21.27905604719764 39 30.587593008409282 23.965341434420818 22.519103597058955 22.92796196011095 40 27.76503324087527 23.434209483555673 22.041491656760446 26.759265618808612 41 23.461066349667593 26.256064808699865 23.397455201866773 26.88541363976577 42 22.251292211508826 23.129837537973845 24.50115792717827 30.117712323339056 43 23.021300576762208 21.284427420420023 25.709030070884513 29.985241931933253 44 24.6657508915599 20.687870382600273 24.728164487298024 29.9182142385418 45 27.870910932065335 21.76476907497909 23.849390217056314 26.514929775899265 46 25.8669132215031 26.12996962092194 22.982732355919516 25.02038480165544 47 23.74002553603663 22.94432263461454 25.72709901818342 27.588552811165414 48 25.191617135561135 22.06415709065293 28.311046537225376 24.43317923656056 49 28.640496631884826 21.878888742130055 25.05167965482323 24.42893497116189 50 23.976084180865584 21.827129837537974 25.885105446220223 28.311680535376215 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 1.0 2 2.0 3 9.5 4 17.0 5 46.5 6 76.0 7 1075.0 8 2074.0 9 6536.0 10 10998.0 11 15402.5 12 19807.0 13 19568.5 14 19330.0 15 22482.5 16 25635.0 17 27995.5 18 30356.0 19 28203.0 20 26050.0 21 30120.5 22 34191.0 23 36429.5 24 38668.0 25 44735.5 26 50803.0 27 54854.0 28 58905.0 29 68442.5 30 77980.0 31 82269.5 32 86559.0 33 92617.5 34 98676.0 35 106887.0 36 115098.0 37 124136.0 38 133174.0 39 146469.5 40 159765.0 41 178060.0 42 196355.0 43 202818.5 44 209282.0 45 227061.0 46 244840.0 47 270962.5 48 297085.0 49 314478.0 50 331871.0 51 361100.0 52 390329.0 53 445756.0 54 501183.0 55 522260.5 56 543338.0 57 539784.5 58 536231.0 59 548699.0 60 561167.0 61 439482.5 62 317798.0 63 251551.0 64 185304.0 65 157086.5 66 128869.0 67 114034.5 68 99200.0 69 80755.5 70 62311.0 71 52351.5 72 42392.0 73 34592.0 74 26792.0 75 17762.5 76 8733.0 77 6484.5 78 4236.0 79 3041.0 80 1846.0 81 1196.5 82 547.0 83 431.5 84 316.0 85 177.5 86 39.0 87 27.5 88 16.0 89 11.0 90 6.0 91 3.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 5678250.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 6.610605661730568 #Duplication Level Percentage of deduplicated Percentage of total 1 63.9227318651157 4.225679731808188 2 10.9027186739877 1.4414714758903733 3 5.012011996742952 0.9939730464699146 4 2.7484209037294587 0.726749071480504 5 1.6803717202035309 0.5554137403694697 6 1.0283161579286497 0.4078675569391294 7 0.7162551760518915 0.33144163654367204 8 0.5385554481562156 0.28481421557898573 9 0.4054702092004709 0.24123632945433396 >10 5.873942863128885 10.385603966693147 >50 3.6874990233754783 17.608081900933296 >100 3.2474701787151004 38.5494634177374 >500 0.14887629648259704 6.6593261933782495 >1k 0.08089881771129802 10.24997804053564 >5k 0.003932581416521432 1.786811989598638 >10k+ 0.002528088053478063 5.552087686589082 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 112732 1.9853299872319818 No Hit GAATTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 54087 0.9525293884559503 No Hit GAATTAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 47222 0.8316294633029542 No Hit GAATTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 21032 0.3703958085677806 No Hit GAATTAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 15978 0.28138951261392153 No Hit GAATTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATTGC 12571 0.2213886320609343 No Hit GAATTAGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGA 11952 0.21048738607845727 No Hit GAATTAGGGGGGCTGGTGAGATGGCTCAGGGGGTAAGAGCACCCGACTAC 11801 0.20782811605688373 No Hit GAATTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 11621 0.20465812530269012 No Hit GAATTAGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCT 9498 0.16726984546295073 No Hit GAATTAGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCG 8831 0.15552326861268875 No Hit GAATTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAGGAGCACCCGACTGC 8042 0.14162814247347333 No Hit GAATTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGC 7956 0.1401135913353586 No Hit GAATTAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 7600 0.13384405406595343 No Hit GAATTAGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC 7274 0.12810284858891385 No Hit GAATTAGGGGGGGCTGGAGAGATGGCTTAGCGGTTAAAAGCACTGACTGC 6965 0.1226610311275481 No Hit GAATTAGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCA 6730 0.11852243208735086 No Hit GAATTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACT 6253 0.11012195658873772 No Hit GAATTAGGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 6056 0.10665257781887025 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0075903667503192 0.0 0.0 0.0 0.0 7 0.007696033108792321 0.0 0.0 0.0 0.0 8 0.007731255228283362 0.0 0.0 0.0 0.0 9 0.00836525337912209 0.0 0.0 0.0 0.0 10 0.015039845022674239 0.0 0.0 0.0 0.0 11 0.027948751816140538 0.0 0.0 0.0 0.0 12 0.033584290934706995 0.0 0.0 0.0 0.0 13 0.04166776735790076 0.0 0.0 0.0 0.0 14 0.057852331264033816 0.0 0.0 0.0 0.0 15 0.06966935235327786 0.0 0.0 0.0 0.0 16 0.0873332452780346 0.0 0.0 0.0 0.0 17 0.09647338528595958 0.0 0.0 0.0 0.0 18 0.10541980363668384 0.0 0.0 0.0 0.0 19 0.12112886892968784 0.0 0.0 0.0 0.0 20 0.13109672874565226 0.0 0.0 0.0 0.0 21 0.14127592127856295 0.0 0.0 0.0 0.0 22 0.15115572579579975 0.0 0.0 0.0 0.0 23 0.15969708977237707 0.0 0.0 0.0 0.0 24 0.1680271210320081 0.0 0.0 0.0 0.0 25 0.17556465460309073 0.0 0.0 0.0 0.0 26 0.18252102320257121 0.0 0.0 0.0 0.0 27 0.19005855677365385 0.0 0.0 0.0 0.0 28 0.1982829216748118 0.0 0.0 0.0 0.0 29 0.20375996125566856 0.0 0.0 0.0 0.0 30 0.2095539999119447 1.7611059745520188E-5 0.0 0.0 0.0 31 0.215048650552547 1.7611059745520188E-5 0.0 0.0 0.0 32 0.2218641306740633 1.7611059745520188E-5 0.0 0.0 0.0 33 0.2269889490600097 1.7611059745520188E-5 0.0 0.0 0.0 34 0.23387487342050808 1.7611059745520188E-5 0.0 0.0 0.0 35 0.2459208382864439 1.7611059745520188E-5 0.0 0.0 0.0 36 0.25941091005151234 1.7611059745520188E-5 0.0 0.0 0.0 37 0.2679346629683441 1.7611059745520188E-5 0.0 0.0 0.0 38 0.27527847488222607 1.7611059745520188E-5 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GAATTAG 601800 0.0 41.391293 1 ATTAGGG 592500 0.0 41.387848 3 AATTAGG 599185 0.0 41.383575 2 TAGGGAT 41115 0.0 41.35133 5 TTAGGGG 352695 0.0 41.327778 4 TAGGGGG 154635 0.0 41.257027 5 TTAGGGA 148360 0.0 41.204773 4 TTAGGGC 59055 0.0 41.17619 4 TAGGGGC 75050 0.0 41.1507 5 TAGGGGA 72350 0.0 41.14775 5 TAGGGAG 50825 0.0 41.05657 5 TAGGGCA 27455 0.0 40.82681 5 TAGGGGT 52245 0.0 40.78706 5 TAGGGTG 14935 0.0 40.68564 5 TAGGGAA 29860 0.0 40.574013 5 AGGGGGG 96595 0.0 40.57001 6 TTAGGGT 34580 0.0 40.526314 4 AGGGATA 4900 0.0 40.497963 6 AGGGATC 12105 0.0 40.292442 6 AGGGATT 14800 0.0 40.164864 6 >>END_MODULE