##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527071_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6065247 Sequences flagged as poor quality 0 Sequence length 52 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.16667054119972 33.0 31.0 34.0 31.0 34.0 2 31.39135158057042 31.0 31.0 33.0 30.0 34.0 3 32.39588412475205 33.0 31.0 34.0 31.0 34.0 4 36.32418020238912 37.0 37.0 37.0 35.0 37.0 5 36.43200334627757 37.0 37.0 37.0 35.0 37.0 6 36.24529767707729 37.0 37.0 37.0 35.0 37.0 7 36.41950888397455 37.0 36.0 37.0 35.0 37.0 8 36.590372329436875 37.0 37.0 37.0 35.0 37.0 9 38.720015689385775 39.0 39.0 39.0 39.0 39.0 10 38.162577715301616 39.0 39.0 39.0 37.0 39.0 11 37.86431038999731 39.0 38.0 39.0 35.0 39.0 12 37.20077253242943 39.0 35.0 39.0 35.0 39.0 13 37.08620423867321 39.0 35.0 39.0 34.0 39.0 14 37.68042257800877 40.0 36.0 40.0 33.0 40.0 15 37.63657918630519 40.0 36.0 40.0 33.0 40.0 16 32.63374137937004 39.0 34.0 40.0 3.0 40.0 17 34.187030140734585 39.0 33.0 40.0 17.0 40.0 18 36.266896797442875 39.0 34.0 40.0 30.0 40.0 19 37.1858278813707 39.0 35.0 40.0 32.0 40.0 20 37.45033285536434 39.0 36.0 40.0 33.0 40.0 21 37.674468657253364 40.0 36.0 40.0 33.0 40.0 22 37.749605910525986 40.0 36.0 40.0 34.0 40.0 23 37.75218156820324 40.0 36.0 40.0 34.0 40.0 24 37.76785759920412 40.0 36.0 40.0 34.0 40.0 25 37.72800744965539 40.0 36.0 40.0 34.0 40.0 26 37.64520010479375 40.0 35.0 40.0 34.0 40.0 27 37.510970781569156 40.0 35.0 40.0 34.0 40.0 28 37.41305440652293 40.0 35.0 40.0 34.0 40.0 29 37.20917202547563 40.0 35.0 40.0 33.0 40.0 30 37.164969868498346 39.0 35.0 40.0 33.0 40.0 31 37.12093423400564 39.0 35.0 40.0 33.0 40.0 32 37.07187621542865 39.0 35.0 40.0 33.0 40.0 33 36.721776376131096 39.0 35.0 40.0 32.0 40.0 34 36.33071184075438 39.0 35.0 40.0 30.0 40.0 35 36.35482891298574 39.0 35.0 40.0 31.0 40.0 36 36.43289185090072 38.0 35.0 40.0 31.0 40.0 37 36.25043712152201 38.0 35.0 40.0 31.0 40.0 38 36.25331763075766 38.0 35.0 40.0 31.0 40.0 39 35.90036201328652 38.0 35.0 40.0 30.0 40.0 40 35.84200082865545 38.0 35.0 40.0 30.0 40.0 41 35.745900373059825 38.0 35.0 40.0 30.0 40.0 42 35.7224249894522 38.0 35.0 40.0 30.0 40.0 43 35.65601895520496 38.0 35.0 40.0 30.0 40.0 44 35.867813297628274 38.0 35.0 40.0 30.0 40.0 45 35.9158528910694 38.0 35.0 40.0 30.0 40.0 46 35.844676070075955 38.0 35.0 40.0 31.0 40.0 47 35.54443982248373 38.0 35.0 40.0 30.0 40.0 48 35.51812135598105 37.0 35.0 40.0 30.0 40.0 49 35.47046690761316 37.0 35.0 40.0 30.0 40.0 50 34.978772010439144 37.0 34.0 40.0 28.0 40.0 51 35.06801124504905 36.0 34.0 40.0 28.0 40.0 52 34.78929662716127 36.0 34.0 40.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 5.0 14 10.0 15 52.0 16 130.0 17 308.0 18 745.0 19 1443.0 20 2658.0 21 4456.0 22 7241.0 23 11030.0 24 16574.0 25 23522.0 26 32173.0 27 44735.0 28 61409.0 29 84918.0 30 113517.0 31 152184.0 32 211259.0 33 332092.0 34 535118.0 35 537307.0 36 604308.0 37 1026263.0 38 1559564.0 39 702224.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 99.68763019873717 0.2719097837235648 0.0333704464138064 0.007089571125462821 8 99.4988167835539 0.4374760005651872 0.0455711036994866 0.01813611218141652 9 98.80725385132708 0.6646060745753636 0.18357043002535592 0.34456964407220353 10 59.84450427163148 24.402946821456737 5.698877556017092 10.053671350894696 11 38.245796090414785 22.77257628584623 19.100821450470196 19.880806173268788 12 35.797668256544206 14.71547655025426 26.26277215091158 23.22408304228995 13 26.990228097882905 14.901470624362043 28.207029326258272 29.90127195149678 14 23.315241737063637 16.900647244869006 34.36583868719609 25.41827233087127 15 28.088237791469993 18.050608656168496 30.315912938088097 23.545240614273418 16 31.41209253308233 27.08353015136894 23.487073156295203 18.01730415925353 17 31.512550107192666 19.556713848586877 26.16884357718655 22.761892467033906 18 31.212315013716672 20.32962548763472 25.99208243291658 22.46597706573203 19 29.197392950361294 24.138538793226395 24.61139669992005 22.05267155649226 20 30.132029247943244 24.022401725766485 24.61865114479262 21.226917881497652 21 27.74398140751729 25.54323014380123 26.412543462780658 20.30024498590082 22 26.37488629894215 22.013365655182714 30.17285198772614 21.43889605814899 23 29.557015567544077 20.758049919483906 28.336966326350765 21.347968186621255 24 31.945310718590687 20.2957604199796 25.697271685720303 22.061657175709414 25 28.2173998849511 20.00845142827654 24.25370310557839 27.520445581193975 26 24.81674695193782 19.549789151208515 28.751739211939757 26.881724684913905 27 23.074493091542685 18.808698145351705 28.329909729974723 29.786899033130886 28 24.815757709455198 23.379657910057084 25.337072010422656 26.46751237006506 29 29.871215467399757 23.350129021950796 22.8730833220807 23.905572188568744 30 29.006007504723218 19.789713427993945 27.336462966800855 23.867816100481974 31 31.855471013793835 19.542699580083053 26.14482147223353 22.457007933889585 32 34.55750441820424 19.08410325251387 24.75226482944553 21.606127499836365 33 34.684556127722416 19.396357642153735 25.047190988264784 20.87189524185907 34 27.421686206678803 20.448779744666624 32.09181753026711 20.037716518387462 35 25.534607246827708 27.065377551812812 27.971144456276885 19.428870745082598 36 25.50466617435366 28.834390421362887 25.12242287906824 20.538520525215215 37 30.022882827360537 26.973988033793184 22.65960479433072 20.343524344515565 38 27.917840773838233 27.996122828963106 22.766871654196443 21.319164743002222 39 30.933694868485983 23.86756878986132 22.38091869960119 22.817817642051512 40 27.74200292255204 23.403712989759526 22.02657204232573 26.827712045362706 41 23.494657348661978 26.198075692548052 23.334779276095432 26.972487682694542 42 22.224552437847954 23.047041612649906 24.4885162962036 30.23988965329854 43 23.03423092249994 21.235507803721763 25.59913883144413 30.131122442334167 44 24.621140738373885 20.560448733580017 24.71963631489369 30.098774213152407 45 27.95442625832056 21.680914231522642 23.745364368507992 26.61929514164881 46 25.523544218397042 26.20483551617931 23.06216053525932 25.20945973016433 47 23.936634402523097 22.943286563597493 25.66665463088313 27.453424402996284 48 25.243967805433147 21.992294790302854 28.326364944411992 24.437372459852007 49 28.63550322023159 21.788181091388363 25.103116163282387 24.47319952509766 50 24.014125063661876 21.819968749829975 25.754993984581336 28.410912201926813 51 22.741448122393038 22.432969341561854 28.201670929477395 26.623911606567713 52 22.7259829649147 22.75725951474029 26.481196891074678 28.035560629270336 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.5 2 1.0 3 10.5 4 20.0 5 58.0 6 96.0 7 1083.5 8 2071.0 9 6648.5 10 11226.0 11 15518.5 12 19811.0 13 19807.5 14 22915.0 15 26026.0 16 27523.0 17 29020.0 18 27322.5 19 25625.0 20 28249.5 21 30874.0 22 34021.0 23 37168.0 24 41772.5 25 46377.0 26 50614.0 27 54851.0 28 58968.5 29 63086.0 30 71138.5 31 79191.0 32 89797.0 33 100403.0 34 101673.5 35 102944.0 36 112042.5 37 121141.0 38 131472.0 39 154656.5 40 167510.0 41 183572.0 42 199634.0 43 208355.5 44 217077.0 45 237143.5 46 257210.0 47 275467.0 48 293724.0 49 327718.5 50 361713.0 51 394297.0 52 426881.0 53 479397.0 54 531913.0 55 540566.5 56 549220.0 57 557126.5 58 565033.0 59 568053.0 60 571073.0 61 452812.5 62 334552.0 63 285251.0 64 189936.0 65 143922.0 66 127402.5 67 110883.0 68 96374.0 69 81865.0 70 66320.5 71 50776.0 72 41594.5 73 32413.0 74 22955.0 75 13497.0 76 9167.0 77 4837.0 78 3756.0 79 2675.0 80 1850.5 81 1026.0 82 622.0 83 218.0 84 132.0 85 46.0 86 35.0 87 24.0 88 21.5 89 18.5 90 18.0 91 9.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 6065247.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.371502396390571 #Duplication Level Percentage of deduplicated Percentage of total 1 68.5330547534028 5.737246321000777 2 10.230813057947147 1.7129455206325699 3 4.451659475215526 1.118012338940447 4 2.461781940744863 0.8243525366534662 5 1.4352003834313998 0.6007391724598315 6 0.9355802572669566 0.46993274194356205 7 0.6168819444948803 0.3614960073640277 8 0.4585880030908213 0.3071256453464622 9 0.32218026702356883 0.2427419589711805 >10 4.968178456231098 11.104273601503687 >50 2.9540634580736023 17.80746691831414 >100 2.456097833955232 36.47729638631613 >500 0.10845014286934829 6.131673456276849 >1k 0.0627154270872849 10.09087266985267 >5k 0.002490504324765827 1.4314724845422875 >10k+ 0.002264094840696206 5.582352239882 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 105954 1.74690330006346 No Hit GAATTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 48061 0.7923997159555085 No Hit GAATTAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 47826 0.7885251828985695 No Hit GAATTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 19142 0.31560132670606816 No Hit GAATTAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 14837 0.2446231785778881 No Hit GAATTAGGGGGGCTGATGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 12597 0.20769145922663992 No Hit GAATTAGGGGGGCTGGTGAGATGGCTCAGGGGGTAAGAGCACCCGACTACTC 11720 0.19323203160563782 No Hit GAATTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATTGCTC 11673 0.19245712499425002 No Hit GAATTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 11557 0.19054458952784611 No Hit GAATTAGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGACC 11156 0.18393315226898427 No Hit GAATTAGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 8884 0.14647383692700397 No Hit GAATTAGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCT 7726 0.12738145701238549 No Hit GAATTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAGGAGCACCCGACTGCTC 7461 0.12301230271413513 No Hit GAATTAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 7272 0.11989618889387357 No Hit GAATTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGCTC 7166 0.11814852717457343 No Hit GAATTAGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG 6899 0.11374639812690233 No Hit GAATTAGGGGGGGCTGGAGAGATGGCTTAGCGGTTAAAAGCACTGACTGCTC 6534 0.10772850635761412 No Hit GAATTAGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 6472 0.10670628912557065 No Hit GAATTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGC 6191 0.10207333683195424 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.006891722628938278 0.0 0.0 0.0 0.0 7 0.007007134251910928 0.0 0.0 0.0 0.0 8 0.007056596376042064 0.0 0.0 0.0 0.0 9 0.0075841923667741805 0.0 0.0 0.0 0.0 10 0.012761228025833078 0.0 0.0 0.0 0.0 11 0.024186978700125487 0.0 0.0 0.0 0.0 12 0.029660787103971197 0.0 0.0 0.0 0.0 13 0.036189787489281144 0.0 0.0 0.0 0.0 14 0.052776086447922074 0.0 0.0 0.0 0.0 15 0.06347639263495782 0.0 0.0 0.0 0.0 16 0.08157953006695358 0.0 0.0 0.0 0.0 17 0.09046622503584767 0.0 0.0 0.0 0.0 18 0.09899019776111344 0.0 0.0 0.0 0.0 19 0.11422453199350331 0.0 0.0 0.0 0.0 20 0.12377072195081255 0.0 0.0 0.0 0.0 21 0.134240204891903 0.0 0.0 0.0 0.0 22 0.14424804134110283 0.0 0.0 0.0 0.0 23 0.1529368878134724 0.0 0.0 0.0 0.0 24 0.161279499416924 0.0 0.0 0.0 0.0 25 0.1674457775586056 0.0 0.0 0.0 0.0 26 0.17364503044970797 0.0 0.0 0.0 0.0 27 0.1808994753222746 0.0 0.0 0.0 0.0 28 0.1885331298131799 0.0 0.0 0.0 0.0 29 0.19451804683304735 0.0 0.0 0.0 0.0 30 0.20060188810117707 0.0 0.0 0.0 0.0 31 0.2063065197509681 0.0 0.0 0.0 0.0 32 0.21262118426504312 0.0 0.0 0.0 0.0 33 0.2172046744345284 0.0 0.0 0.0 0.0 34 0.22373367481983833 0.0 0.0 0.0 0.0 35 0.23583540785725626 0.0 0.0 0.0 0.0 36 0.2485636611336686 0.0 0.0 0.0 0.0 37 0.25616434087515316 0.0 0.0 0.0 0.0 38 0.26310552562822254 0.0 0.0 0.0 0.0 39 0.27007968513071273 0.0 0.0 0.0 0.0 40 0.2777298269963284 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GAATTAG 643675 0.0 43.217167 1 AATTAGG 640885 0.0 43.198235 2 ATTAGGG 634010 0.0 43.194336 3 TAGGGGG 165295 0.0 43.072388 5 TTAGGGG 380035 0.0 43.065952 4 TAGGGAG 54850 0.0 42.976665 5 TTAGGGC 62090 0.0 42.873573 4 TTAGGGA 159305 0.0 42.832367 4 TAGGGGC 81610 0.0 42.70261 5 TAGGGGA 78995 0.0 42.59928 5 TAGGGGT 56345 0.0 42.538467 5 TTAGGGT 36125 0.0 42.4537 4 TAGGGAT 44510 0.0 42.325993 5 TAGGGAA 32375 0.0 42.312897 5 TAGGGCA 29260 0.0 42.29768 5 AGGGGGG 105415 0.0 42.279938 6 TAGGGTG 15890 0.0 42.22215 5 AGGGATC 12725 0.0 42.0778 6 TAGGGAC 29135 0.0 41.610775 5 TAGGGCC 7730 0.0 41.447605 5 >>END_MODULE