SRR1527070_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1527070_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5877283
Sequences flagged as poor quality	0
Sequence length	52
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC	99299	1.6895391969384492	No Hit
GAATTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT	47198	0.803058147786996	No Hit
GAATTAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA	46397	0.7894294013066923	No Hit
GAATTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC	19096	0.32491203843680827	No Hit
GAATTAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT	14762	0.2511704813261502	No Hit
GAATTAGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGACC	11208	0.1907003627356382	No Hit
GAATTAGGGGGGCTGGTGAGATGGCTCAGGGGGTAAGAGCACCCGACTACTC	11090	0.18869263229284688	No Hit
GAATTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATTGCTC	11059	0.1881651776849949	No Hit
GAATTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC	10417	0.1772417629030285	No Hit
GAATTAGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC	8302	0.1412557469157092	No Hit
GAATTAGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCT	7374	0.12546613800968917	No Hit
GAATTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAGGAGCACCCGACTGCTC	7341	0.12490465407229837	No Hit
GAATTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGCTC	6955	0.11833699347130297	No Hit
GAATTAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG	6912	0.117605362886218	No Hit
GAATTAGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG	6492	0.1104592036830624	No Hit
GAATTAGGGGGGGCTGGAGAGATGGCTTAGCGGTTAAAAGCACTGACTGCTC	6476	0.11018696904675171	No Hit
GAATTAGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC	6302	0.10722641737687295	No Hit
GAATTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGC	6033	0.10264947255389947	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATACGC	20	6.313585E-4	46.0	26
GAATTAG	622995	0.0	43.26693	1
AATTAGG	620325	0.0	43.265175	2
ATTAGGG	613360	0.0	43.224747	3
TTAGGGG	367030	0.0	43.152496	4
TAGGGGC	78285	0.0	43.07377	5
TTAGGGC	61705	0.0	43.010612	4
TAGGGGG	161160	0.0	42.97586	5
TAGGGAG	51825	0.0	42.968834	5
TTAGGGA	152030	0.0	42.918304	4
TAGGGGA	75420	0.0	42.883324	5
TAGGGAT	42685	0.0	42.750847	5
TAGGGGT	53970	0.0	42.72707	5
TTAGGGT	35250	0.0	42.417873	4
TAGGGCA	29175	0.0	42.286892	5
AGGGGGG	102385	0.0	42.088978	6
TAGGGAC	28270	0.0	41.95649	5
TAGGGCT	18230	0.0	41.886997	5
TAGGGAA	30770	0.0	41.829056	5
TAGGGTG	15675	0.0	41.81818	5