##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527068_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1227677 Sequences flagged as poor quality 0 Sequence length 52 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.72905902774101 31.0 31.0 33.0 31.0 34.0 2 32.43730150520047 34.0 31.0 34.0 31.0 34.0 3 30.9874152566188 31.0 31.0 33.0 30.0 33.0 4 35.83548034214211 37.0 35.0 37.0 35.0 37.0 5 36.09859352256335 37.0 35.0 37.0 35.0 37.0 6 35.136645876724906 35.0 35.0 37.0 33.0 37.0 7 36.23405504868137 37.0 35.0 37.0 35.0 37.0 8 36.59728332452266 37.0 37.0 37.0 35.0 37.0 9 38.707009254062754 39.0 39.0 39.0 39.0 39.0 10 38.05801200152809 39.0 38.0 39.0 37.0 39.0 11 37.763161645937814 39.0 37.0 39.0 35.0 39.0 12 37.37614698328632 39.0 37.0 39.0 35.0 39.0 13 37.3177138612192 39.0 37.0 39.0 35.0 39.0 14 38.20509873525366 40.0 38.0 40.0 35.0 40.0 15 38.06141680588624 40.0 38.0 40.0 34.0 40.0 16 32.98734602016654 40.0 35.0 40.0 3.0 40.0 17 34.683311652820734 39.0 35.0 40.0 17.0 40.0 18 36.673300876370575 39.0 34.0 40.0 30.0 40.0 19 37.5119669098631 39.0 37.0 40.0 33.0 40.0 20 37.79216194487638 39.0 37.0 40.0 34.0 40.0 21 37.997914760967255 40.0 38.0 40.0 34.0 40.0 22 37.99825849958906 40.0 38.0 40.0 34.0 40.0 23 38.00300730566753 40.0 38.0 40.0 34.0 40.0 24 37.951484796082354 40.0 38.0 40.0 34.0 40.0 25 37.90185529255659 40.0 37.0 40.0 34.0 40.0 26 37.803015776951106 40.0 37.0 40.0 34.0 40.0 27 37.70570923785328 40.0 37.0 40.0 34.0 40.0 28 37.582256570742956 40.0 37.0 40.0 33.0 40.0 29 37.35002040438975 39.0 36.0 40.0 33.0 40.0 30 37.40162844135713 39.0 36.0 40.0 33.0 40.0 31 37.33034177556475 39.0 36.0 40.0 33.0 40.0 32 37.2689559224454 39.0 36.0 40.0 33.0 40.0 33 36.966347826016126 39.0 35.0 40.0 32.0 40.0 34 36.82355619597011 39.0 35.0 40.0 31.0 40.0 35 36.7652924995744 39.0 35.0 40.0 31.0 40.0 36 36.70225311706581 39.0 35.0 40.0 31.0 40.0 37 36.519483544938936 39.0 35.0 40.0 31.0 40.0 38 36.479694577645425 38.0 35.0 40.0 31.0 40.0 39 36.12109455500103 38.0 35.0 40.0 30.0 40.0 40 36.15065770556914 38.0 35.0 40.0 30.0 40.0 41 36.07079142152211 38.0 35.0 40.0 30.0 40.0 42 36.03005513665239 38.0 35.0 40.0 30.0 40.0 43 35.9038346405447 38.0 35.0 40.0 30.0 40.0 44 36.23508789363978 38.0 35.0 40.0 31.0 40.0 45 36.32510587068097 39.0 35.0 40.0 31.0 40.0 46 36.26576290017651 39.0 35.0 40.0 31.0 40.0 47 35.97146399256482 38.0 35.0 40.0 31.0 40.0 48 35.96134569597704 38.0 35.0 40.0 31.0 40.0 49 35.883928753246984 38.0 35.0 40.0 30.0 40.0 50 35.36847965710851 37.0 35.0 40.0 29.0 40.0 51 35.45089139895917 37.0 34.0 40.0 29.0 40.0 52 34.99470789140792 37.0 34.0 40.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 0.0 14 3.0 15 9.0 16 30.0 17 60.0 18 100.0 19 206.0 20 351.0 21 633.0 22 1140.0 23 1863.0 24 2764.0 25 4216.0 26 5998.0 27 8199.0 28 10907.0 29 15019.0 30 20940.0 31 27460.0 32 37048.0 33 52708.0 34 83279.0 35 98625.0 36 158320.0 37 238989.0 38 373007.0 39 85802.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 0.0 100.0 0.0 4 0.0 0.0 0.0 100.0 5 100.0 0.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.36693446240339 0.5806087431791913 0.03298913313518132 0.019467661282242806 8 99.0673442607461 0.6403964560711002 0.24387522125119226 0.048384061931599276 9 98.04020112782108 1.240309951233101 0.38837576984825817 0.3311131510975607 10 48.43602999811839 38.4662252367683 4.621003733066596 8.476741032046704 11 30.67940508782033 24.21956263740381 25.427046364801164 19.673985909974693 12 28.348173012934186 16.997386120290596 29.591578240856514 25.062862625918708 13 24.44307419622588 17.17870417055952 31.70451185450245 26.67370977871215 14 26.28012091128204 19.937410247157842 30.808429252971266 22.974039588588855 15 24.589936929664724 21.901363306472305 29.792689771006543 23.716009992856428 16 27.904570990578144 29.36717068088756 22.94944028437447 19.778818044159824 17 28.056972640197706 21.20899878388208 25.143014001239738 25.591014574680475 18 26.402221431207067 21.122412491233444 27.286900381777947 25.18846569578155 19 26.870259848478064 21.620018946351525 26.869526756630613 24.640194448539805 20 25.76532752507378 22.606027481169722 26.763880075948315 24.864764917808184 21 26.97704689425639 21.55241158708683 28.493895381276996 22.976646137379785 22 25.658866297894317 21.664656094396165 28.824193985877393 23.852283621832125 23 25.92766664195876 22.94324973099602 28.293354033674984 22.835729593370242 24 25.65707429560055 22.69880432719681 26.311073678174306 25.333047699028327 25 26.068094458069996 24.075632271354763 25.26185633517611 24.59441693539913 26 26.356362463416684 23.641071715117253 26.365648293484362 23.63691752798171 27 26.03803769232461 20.16703090470865 26.851851097642133 26.943080305324607 28 26.074203556798736 22.903499861934367 25.651291015470683 25.371005565796217 29 26.08430393336358 23.867922914577694 25.671165950001505 24.37660720205722 30 26.23108521215271 22.98014868731759 25.995029637274296 24.7937364632554 31 27.513262853340088 23.270941786805487 25.27065343734549 23.945141922508935 32 27.747200607325865 23.25041521507693 25.525036308410108 23.47734786918709 33 28.963318527593167 22.311813286393733 26.59567622428375 22.129191961729347 34 26.48473499136988 23.787282811358363 27.113809251130387 22.61417294614137 35 26.03160277499701 24.922027536558883 27.11714889176876 21.92922079667535 36 25.10350849612724 26.702951997960376 26.041540242262418 22.151999263649966 37 26.573846378159725 26.405805435794594 25.211517361651314 21.808830824394366 38 25.74113549410798 27.203816639067117 25.115156511036695 21.93989135578821 39 26.98568108712634 24.47647060260964 25.090475752172598 23.44737255809142 40 25.247113043577425 26.327934790665626 24.791455733063337 23.633496432693615 41 24.128089065772183 26.010343111421 25.188628605080975 24.672939217725833 42 23.65434882302104 25.32319168641263 25.66269466643099 25.35976482413534 43 24.545544145569234 23.727006370568155 26.19426771048085 25.533181773381763 44 23.5603501572482 23.74427475630805 25.59248075837537 27.102894328068377 45 25.658296115346303 25.229193020639794 25.204919535024278 23.90759132898963 46 24.974158512377443 24.46213458425954 25.62327061596821 24.940436287394814 47 24.75789641738014 24.38279775543567 25.944446299800354 24.914859527383832 48 24.960392676575353 25.66684885356653 24.799112470136688 24.573645999721425 49 25.27285271288784 24.36512209644719 25.65943648044233 24.70258871022264 50 23.96387649194373 24.678559588556272 25.88009712652432 25.47746679297568 51 23.24153665825783 25.513795566749238 25.80597339528231 25.438694379710626 52 23.528419934559334 26.263422708090157 26.182782604870823 24.025374752479685 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.5 8 1.0 9 75.0 10 149.0 11 689.5 12 1230.0 13 2669.5 14 5121.0 15 6133.0 16 5452.5 17 4772.0 18 4719.0 19 4666.0 20 5076.5 21 5487.0 22 5445.5 23 5404.0 24 5982.5 25 6561.0 26 7383.0 27 8205.0 28 8988.0 29 9771.0 30 12976.0 31 16181.0 32 17435.0 33 18689.0 34 20471.0 35 22253.0 36 25047.5 37 27842.0 38 28056.5 39 33479.5 40 38688.0 41 38718.5 42 38749.0 43 40335.0 44 41921.0 45 49003.0 46 56085.0 47 57391.5 48 58698.0 49 60872.5 50 63047.0 51 66452.0 52 69857.0 53 71338.0 54 72819.0 55 74258.0 56 75697.0 57 82782.5 58 89868.0 59 95535.0 60 101202.0 61 95017.0 62 88832.0 63 82740.5 64 69621.0 65 62593.0 66 49849.0 67 37105.0 68 30707.0 69 24309.0 70 21150.0 71 17991.0 72 18735.0 73 19479.0 74 16205.5 75 12932.0 76 9995.5 77 7059.0 78 4835.5 79 2612.0 80 1755.5 81 899.0 82 732.0 83 565.0 84 406.0 85 247.0 86 144.0 87 41.0 88 22.5 89 3.5 90 3.0 91 1.5 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1227677.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.559630407180991 #Duplication Level Percentage of deduplicated Percentage of total 1 71.81454942946242 8.30149649262816 2 10.168282326156017 2.3508317113246835 3 3.8747396524656823 1.3437167491965663 4 2.0011276714931965 0.9252918512017619 5 1.2139770698530687 0.7016563125147008 6 0.8397683674033979 0.5824447172895034 7 0.5619506875423854 0.45471595785358565 8 0.3778246412596691 0.3494010569350017 9 0.3134414765411496 0.3260940860787103 >10 4.229037707814718 12.82817752460404 >50 2.451416166511083 20.416364544485642 >100 2.0675779959054257 42.25196524591792 >500 0.06813695336195105 5.343336177994313 >1k 0.018169854229853614 3.824507571975391 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AGTCGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 4293 0.349684811232922 No Hit AGTCGTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 3950 0.3217458663801635 No Hit AGTCGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 3932 0.3202796826852666 No Hit AGTCGTGGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAACG 2818 0.2295392029010888 No Hit AGTCGTGGGACTGAAACAGCCATATATTGACTCCAAAAGATTAAGCATTTTT 2691 0.21919446238709367 No Hit AGTCGTGGGGACATGCCCAGATATTTCTCTAGATCTTAACATTTTCCCCAGC 2343 0.1908482442857527 No Hit AGTCGTGGGCGGTAGATGCTTAATAATGTGTATTGAATGACTATCTCATGGA 1993 0.1623391168849787 No Hit AGTCGTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 1923 0.1566372914048239 No Hit AGTCGTGGGGCTCTTCCGGTCTCTTTGGCCTCGCCGGTAGAAGCAAGATGAC 1642 0.13374853483448823 No Hit AGTCGTGGGAGGCAAAATTTGTTCCTGAAGTTGCTTTTTACCCCAGCAGACA 1605 0.13073471279497784 No Hit AGTCGTGGGGCTCTTTCCAGCCAGCGCCGAGCGATGGGCATCTCTCGGGACA 1459 0.11884233393636925 No Hit AGTCGTGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 1439 0.11721324094203932 No Hit AGTCGTGGGGAATCTCTCTTCATCTCTAACCATGCCTACTAACCAGAGCTGA 1300 0.1058910446314462 No Hit AGTCGTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1229 0.10010776450157494 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 4.072732485824855E-4 0.0 0.0 0.0 0.0 9 7.330918474484739E-4 0.0 0.0 0.0 0.0 10 0.005864734779587791 0.0 0.0 0.0 0.0 11 0.00953019401683016 0.0 0.0 0.0 0.0 12 0.012788380005490043 0.0 0.0 0.0 0.0 13 0.018327296186211844 0.0 0.0 0.0 0.0 14 0.028753491349923475 0.0 0.0 0.0 0.0 15 0.03698041097128968 0.0 0.0 0.0 0.0 16 0.05261970371685712 0.0 0.0 0.0 0.0 17 0.059461894293042876 0.0 0.0 0.0 0.0 18 0.06565244767149665 0.0 0.0 0.0 0.0 19 0.07534555098775982 0.0 0.0 0.0 0.0 20 0.08023282997074964 0.0 0.0 0.0 0.0 21 0.08756374844523437 0.0 0.0 0.0 0.0 22 0.09758267036036351 0.0 0.0 0.0 0.0 23 0.1036103144393843 0.0 0.0 0.0 0.0 24 0.11403650960309593 0.0 0.0 0.0 0.0 25 0.11998269903240022 0.0 0.0 0.0 0.0 26 0.12429979546737456 0.0 0.0 0.0 0.0 27 0.12983871164809638 0.0 0.0 0.0 0.0 28 0.1370067208231481 0.0 0.0 0.0 0.0 29 0.1427900009530194 0.0 0.0 0.0 0.0 30 0.14669982413941127 0.0 0.0 0.0 0.0 31 0.15191292172126708 0.0 0.0 0.0 0.0 32 0.15614856350652492 0.0 0.0 0.0 0.0 33 0.1622576622352622 0.0 0.0 0.0 0.0 34 0.16991439930861293 0.0 0.0 0.0 0.0 35 0.1794445933254431 0.0 0.0 0.0 0.0 36 0.19369915702583007 0.0 0.0 0.0 0.0 37 0.2016002580483303 0.0 0.0 0.0 0.0 38 0.2072206288787686 0.0 0.0 0.0 0.0 39 0.21316681830807288 0.0 0.0 0.0 0.0 40 0.21984609958482565 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCGTAC 35 1.0196527E-7 46.000004 20 GGTCGTA 35 1.0196527E-7 46.000004 9 CATGACG 35 1.0196527E-7 46.000004 33 GACGTAT 35 1.0196527E-7 46.000004 9 AACGGTA 35 1.0196527E-7 46.000004 36 GGACGTA 55 1.8189894E-12 46.000004 8 TCGCGTT 35 1.0196527E-7 46.000004 21 GATACGT 20 6.311624E-4 46.0 34 CTCACGA 30 1.8615083E-6 46.0 44 CGAACCG 45 3.092282E-10 46.0 13 CGTATTA 30 1.8615083E-6 46.0 11 CGTATCG 30 1.8615083E-6 46.0 37 TTTACGC 20 6.311624E-4 46.0 13 CGACGAA 20 6.311624E-4 46.0 37 TTATGCG 25 3.417293E-5 46.0 23 CCGGATT 40 5.6115823E-9 46.0 21 CCTACGC 20 6.311624E-4 46.0 38 CACGACC 20 6.311624E-4 46.0 32 TAACGGT 20 6.311624E-4 46.0 40 TAACGAA 20 6.311624E-4 46.0 31 >>END_MODULE