##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527067_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1193260 Sequences flagged as poor quality 0 Sequence length 52 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.68374956002883 31.0 31.0 33.0 30.0 34.0 2 32.42886629904631 34.0 31.0 34.0 31.0 34.0 3 30.991100011732566 31.0 31.0 33.0 30.0 33.0 4 35.85322896937801 37.0 35.0 37.0 35.0 37.0 5 36.1071912240417 37.0 35.0 37.0 35.0 37.0 6 35.15486901429697 35.0 35.0 37.0 33.0 37.0 7 36.25849605283006 37.0 35.0 37.0 35.0 37.0 8 36.62721871176441 37.0 37.0 37.0 35.0 37.0 9 38.6554455860416 39.0 39.0 39.0 39.0 39.0 10 38.058097983674976 39.0 38.0 39.0 37.0 39.0 11 37.69140505841141 39.0 37.0 39.0 35.0 39.0 12 37.3422079010442 39.0 37.0 39.0 35.0 39.0 13 37.227744163049124 39.0 37.0 39.0 34.0 39.0 14 38.14152322209745 40.0 38.0 40.0 34.0 40.0 15 38.17728324086955 40.0 38.0 40.0 35.0 40.0 16 38.20179759650034 40.0 38.0 40.0 35.0 40.0 17 38.18083820793456 40.0 38.0 40.0 34.0 40.0 18 38.14073797831151 40.0 38.0 40.0 34.0 40.0 19 38.08245311164373 40.0 38.0 40.0 34.0 40.0 20 38.05340076764494 40.0 38.0 40.0 34.0 40.0 21 33.79509243584801 39.0 34.0 40.0 10.0 40.0 22 34.46494728726346 39.0 34.0 40.0 17.0 40.0 23 36.54410438630307 39.0 34.0 40.0 30.0 40.0 24 37.31778321572834 39.0 36.0 40.0 33.0 40.0 25 37.601945929638134 39.0 37.0 40.0 33.0 40.0 26 37.67918810653168 39.0 37.0 40.0 34.0 40.0 27 37.667995239930946 40.0 37.0 40.0 34.0 40.0 28 37.556110152020516 40.0 37.0 40.0 33.0 40.0 29 37.53745034611065 40.0 37.0 40.0 33.0 40.0 30 37.48253356351508 40.0 36.0 40.0 33.0 40.0 31 37.30424299817307 39.0 36.0 40.0 33.0 40.0 32 37.273094715317704 39.0 36.0 40.0 33.0 40.0 33 36.99097933392555 39.0 35.0 40.0 32.0 40.0 34 36.82956941488025 39.0 35.0 40.0 31.0 40.0 35 36.768121784020245 39.0 35.0 40.0 31.0 40.0 36 36.64653470324992 39.0 35.0 40.0 31.0 40.0 37 36.67598008816184 39.0 35.0 40.0 31.0 40.0 38 36.568131840504165 38.0 35.0 40.0 31.0 40.0 39 36.41392990630709 38.0 35.0 40.0 31.0 40.0 40 31.590278732212592 37.0 31.0 40.0 9.0 40.0 41 32.4518973232992 37.0 31.0 40.0 14.0 40.0 42 34.26169569079664 37.0 31.0 40.0 24.0 40.0 43 35.12753297688685 37.0 33.0 40.0 28.0 40.0 44 35.91477716507718 38.0 35.0 40.0 30.0 40.0 45 36.18346630239847 38.0 35.0 40.0 31.0 40.0 46 36.23281933526641 38.0 35.0 40.0 31.0 40.0 47 36.19449910329685 38.0 35.0 40.0 31.0 40.0 48 36.075639005748954 38.0 35.0 40.0 31.0 40.0 49 35.940700266496826 38.0 35.0 40.0 31.0 40.0 50 35.82423780232305 38.0 35.0 40.0 31.0 40.0 51 35.65244204951142 37.0 35.0 40.0 30.0 40.0 52 35.132948393476696 37.0 34.0 40.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 1.0 13 1.0 14 4.0 15 8.0 16 31.0 17 60.0 18 102.0 19 236.0 20 394.0 21 687.0 22 1189.0 23 1857.0 24 2941.0 25 4457.0 26 6216.0 27 8708.0 28 11876.0 29 16540.0 30 22158.0 31 30973.0 32 40413.0 33 54517.0 34 94120.0 35 119776.0 36 154080.0 37 166860.0 38 365838.0 39 89215.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 0.0 100.0 0.0 4 0.0 0.0 0.0 100.0 5 100.0 0.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.35764208973737 0.5914888624440607 0.03234835660291973 0.018520691215661297 8 99.0928213465632 0.6275245964835828 0.23398085915894273 0.045673197794277864 9 97.99230678980273 1.2343495969026028 0.4323450044416137 0.34099860885305805 10 48.42347853778724 38.39238724167407 4.663862025040645 8.520272195498048 11 30.861002631446627 24.19305096961266 25.36538558235422 19.580560816586495 12 28.37814055612356 16.989256323014263 29.50362871461375 25.128974406248428 13 24.560615456815782 17.160551765750967 31.662672007777015 26.61616076965624 14 26.319159277944454 19.95072322880177 30.739738196201998 22.990379297051774 15 24.519132460654006 21.73482727988871 29.808926805557885 23.937113453899403 16 29.208303303554967 21.78527730754404 26.046544759733838 22.959874629167157 17 28.090525116068587 21.141997552922245 25.145148584549887 25.622328746459278 18 26.41159512595746 21.026934616093726 27.381459195816504 25.180011062132312 19 26.88877528786685 21.5571627306706 26.822653906105963 24.731408075356587 20 25.80032851180799 22.625999363089353 26.70147327489399 24.872198850208672 21 31.962941856762146 20.662470878098656 26.635016677002497 20.7395705881367 22 25.862930124197575 21.76977356150378 28.626451904865664 23.74084440943298 23 26.08299951393661 22.898278665169368 28.203241539982905 22.815480280911117 24 25.866868913732127 22.571778153964768 26.25840135427317 25.302951578029937 25 26.160099223974658 24.01689489298225 25.27982166501852 24.54318421802457 26 26.39114694199085 23.579270234483683 26.306085848851048 23.723496974674422 27 26.053584298476444 20.206995960645628 26.793909122906996 26.945510617970935 28 26.050651157333693 22.924174111258232 25.61847376095738 25.406700970450697 29 25.940029834235624 23.91549201347569 25.75725323902586 24.387224913262827 30 26.2313326517272 22.987194743811074 25.95704205286358 24.82443055159814 31 27.69086368436049 23.21698540133751 25.17942443390376 23.912726480398234 32 27.846403968958988 23.180111626971488 25.545229036421237 23.42825536764829 33 28.978512646028527 22.349781271474782 26.506042270754072 22.16566381174262 34 26.436987747850427 23.793976166133117 27.066104620954363 22.702931465062097 35 26.046125739570584 24.85024219365436 27.085211940398572 22.01842012637648 36 25.19266547106247 26.578700367061664 26.09883847610747 22.1297956857684 37 26.44645760353988 26.395672359753952 25.233478034963042 21.924392001743122 38 25.717111107386486 27.165999027873223 25.12805256188928 21.988837302851014 39 26.68345540787423 24.483096726614484 25.168948929822506 23.664498935688787 40 26.106045622915374 30.159143858002444 22.631362821178953 21.103447697903224 41 24.108073680505505 25.988552369140006 25.191576018638017 24.711797931716475 42 23.5190151350083 25.414410941454502 25.756499002732014 25.310074920805185 43 24.552905485811976 23.683773863198297 26.206442854030136 25.556877796959586 44 23.577677957863333 23.73690561989843 25.612607478671872 27.07280894356636 45 25.64059802557699 25.266999648023063 25.182022358915912 23.910379967484037 46 24.949885188475267 24.50899217270335 25.654928515160147 24.88619412366123 47 24.467509176541576 24.37842548983457 26.08207766957746 25.07198766404639 48 24.84848230896871 25.60397566330892 24.909240232639995 24.63830179508238 49 25.232137170440645 24.402225835107185 25.63917335702194 24.726463637430232 50 23.91892797881434 24.714144444630676 25.955282168177934 25.411645408377055 51 23.38978931666192 25.510869383034713 25.7385649397449 25.360776360558468 52 23.443591505623253 26.305080200459248 26.235858069490302 24.015470224427197 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 1.0 6 2.0 7 1.0 8 0.0 9 52.5 10 105.0 11 602.5 12 1100.0 13 2476.0 14 4792.5 15 5733.0 16 5294.5 17 4856.0 18 4712.5 19 4569.0 20 4898.5 21 5228.0 22 5161.0 23 5094.0 24 5722.5 25 6351.0 26 7139.5 27 7928.0 28 8686.0 29 9444.0 30 12243.0 31 15042.0 32 16406.5 33 17771.0 34 19447.5 35 21124.0 36 24020.0 37 26916.0 38 26880.5 39 31936.5 40 37028.0 41 37149.5 42 37271.0 43 38871.5 44 40472.0 45 47467.5 46 54463.0 47 55902.0 48 57341.0 49 58846.5 50 60352.0 51 63697.5 52 67043.0 53 69666.5 54 72290.0 55 73046.0 56 73802.0 57 80112.0 58 86422.0 59 92342.5 60 98263.0 61 92528.5 62 86794.0 63 81329.5 64 68501.5 65 61138.0 66 49437.0 67 37736.0 68 31178.5 69 24621.0 70 20920.0 71 17219.0 72 18105.0 73 18991.0 74 15795.0 75 12599.0 76 9901.5 77 7204.0 78 4941.0 79 2678.0 80 1790.5 81 903.0 82 713.0 83 523.0 84 381.0 85 239.0 86 135.5 87 32.0 88 18.0 89 2.0 90 0.0 91 2.5 92 5.0 93 3.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1193260.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.542681259220121 #Duplication Level Percentage of deduplicated Percentage of total 1 68.25097048205907 7.877991979068491 2 10.04852574765786 2.319738596605625 3 4.804534281277963 1.6637162342336327 4 2.760736287500583 1.2746519602952764 5 1.6819613187179145 0.9707171696149217 6 1.190652816360311 0.8245995569783889 7 0.8587647902294835 0.6938713775181969 8 0.5975993800546832 0.5518319331743003 9 0.4916094358281277 0.5107041919610197 >10 4.779639756207084 13.76898708728824 >50 2.4665569591483334 20.494213996822058 >100 1.9765176896270757 39.81938551027998 >500 0.07557044378944673 5.7452143213206135 >1k 0.01636061154204517 3.484376084839247 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AGTCGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 4071 0.3411662169183581 No Hit AGTCGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 4050 0.33940633223270705 No Hit AGTCGTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 3740 0.3134270821111912 No Hit AGTCGTGGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAACG 2663 0.22317013894708615 No Hit AGTCGTGGGGACATGCCCAGATATTTCTCTAGATCTTAACATTTTCCCCAGC 2287 0.19165982267066692 No Hit AGTCGTGGGACTGAAACAGCCATATATTGACTCCAAAAGATTAAGCATTTTT 2262 0.18956472185441564 No Hit AGTCGTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 1963 0.16450731609205035 No Hit AGTCGTGGGCGGTAGATGCTTAATAATGTGTATTGAATGACTATCTCATGGA 1761 0.14757890149674002 No Hit AGTCGTGGGGCTCTTCCGGTCTCTTTGGCCTCGCCGGTAGAAGCAAGATGAC 1527 0.12796875785662806 No Hit AGTCGTGGGAGGCAAAATTTGTTCCTGAAGTTGCTTTTTACCCCAGCAGACA 1464 0.12268910379967485 No Hit AGTCGTGGGGCTCTTTCCAGCCAGCGCCGAGCGATGGGCATCTCTCGGGACA 1444 0.12101302314667381 No Hit AGTCGTGGGGAATCTCTCTTCATCTCTAACCATGCCTACTAACCAGAGCTGA 1338 0.1121297956857684 No Hit AGTCGTGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 1321 0.11070512713071752 No Hit AGTCGTGGGGCTCTTCGGACTTGGGCTTGGGTTCCGGCGACATGGCTAAACG 1261 0.10567688517171446 No Hit AGTCGTGGGATATTATTTGATCTTATCTTGGATCCTTTTGAAAAGTTAAGAA 1222 0.10240852789836247 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 8.380403265005112E-5 0.0 0.0 0.0 0.0 9 3.352161306002045E-4 0.0 0.0 0.0 0.0 10 0.004776829861052914 0.0 0.0 0.0 0.0 11 0.009218443591505624 0.0 0.0 0.0 0.0 12 0.012989625060757924 0.0 0.0 0.0 0.0 13 0.01810167105241104 0.0 0.0 0.0 0.0 14 0.028828587231617585 0.0 0.0 0.0 0.0 15 0.0372089904966227 0.0 0.0 0.0 0.0 16 0.04894155506762986 0.0 0.0 0.0 0.0 17 0.05447262122253323 0.0 0.0 0.0 0.0 18 0.06167976803043763 0.0 0.0 0.0 0.0 19 0.07106581968724335 0.0 0.0 0.0 0.0 20 0.07751873020129729 0.0 0.0 0.0 0.0 21 0.08548011330305215 0.0 0.0 0.0 0.0 22 0.09511757705780802 0.0 0.0 0.0 0.0 23 0.10207331176776227 0.0 0.0 0.0 0.0 24 0.11204599165311835 0.0 0.0 0.0 0.0 25 0.11699042957947137 0.0 0.0 0.0 0.0 26 0.12235388766907464 0.0 0.0 0.0 0.0 27 0.12763354172602787 0.0 0.0 0.0 0.0 28 0.1355949248277827 0.0 0.0 0.0 0.0 29 0.14087457888473592 0.0 0.0 0.0 0.0 30 0.14464576035398824 0.0 0.0 0.0 0.0 31 0.1500092184435915 0.0 0.0 0.0 0.0 32 0.1567135410555956 0.0 0.0 0.0 0.0 33 0.16107135075339826 0.0 0.0 0.0 0.0 34 0.16660241690830163 0.0 0.0 0.0 0.0 35 0.17422858387945628 0.0 0.0 0.0 0.0 36 0.18579354038516332 0.0 0.0 0.0 0.0 37 0.19157601863801685 0.0 0.0 0.0 0.0 38 0.19811273318472084 0.0 0.0 0.0 0.0 39 0.20406281950287447 0.0 0.0 0.0 0.0 40 0.21219181066992943 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCGTA 30 1.8614628E-6 46.0 12 CGTATTT 25 3.4172357E-5 46.0 39 GCGACGG 115 0.0 46.0 43 TAGACGC 25 3.4172357E-5 46.0 15 TAGACCT 25 3.4172357E-5 46.0 25 CGCATTA 75 0.0 46.0 45 TAGAACG 25 3.4172357E-5 46.0 35 CGTCTAA 30 1.8614628E-6 46.0 20 AAGCGAC 20 6.3115516E-4 46.0 29 CGACAAT 40 5.6115823E-9 46.0 11 TCGATAT 20 6.3115516E-4 46.0 12 CCGTCTA 25 3.4172357E-5 46.0 18 CCGTATA 20 6.3115516E-4 46.0 31 TCAATCG 20 6.3115516E-4 46.0 30 TACGATA 20 6.3115516E-4 46.0 28 TGCGATA 25 3.4172357E-5 46.0 14 CTACGGG 25 3.4172357E-5 46.0 12 TGCGACG 115 0.0 46.0 42 CGCTAAA 45 3.092282E-10 46.0 29 CGTAACG 30 1.8614628E-6 46.0 28 >>END_MODULE