##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527065_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1649189 Sequences flagged as poor quality 0 Sequence length 52 %GC 58 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.652832392163663 31.0 31.0 33.0 31.0 34.0 2 32.34711788642782 33.0 31.0 34.0 31.0 34.0 3 32.92380557959094 34.0 31.0 34.0 31.0 34.0 4 36.41190851988462 37.0 37.0 37.0 35.0 37.0 5 33.60084926591191 35.0 33.0 35.0 32.0 35.0 6 35.237744733926796 35.0 35.0 37.0 35.0 37.0 7 36.17417530677199 37.0 35.0 37.0 35.0 37.0 8 36.5622599956706 37.0 37.0 37.0 35.0 37.0 9 38.66151726697183 39.0 39.0 39.0 38.0 39.0 10 38.026282008914684 39.0 38.0 39.0 35.0 39.0 11 37.64485756332355 39.0 37.0 39.0 35.0 39.0 12 37.23839353767215 39.0 37.0 39.0 34.0 39.0 13 37.17765641172722 39.0 37.0 39.0 34.0 39.0 14 38.059081160497676 40.0 38.0 40.0 34.0 40.0 15 37.939660645323244 40.0 38.0 40.0 34.0 40.0 16 32.91671057713822 39.0 34.0 40.0 3.0 40.0 17 34.478690435116896 39.0 34.0 40.0 16.0 40.0 18 36.39970797767872 39.0 34.0 40.0 30.0 40.0 19 37.32223717233137 39.0 36.0 40.0 33.0 40.0 20 37.57318900380733 39.0 37.0 40.0 33.0 40.0 21 37.757272210765414 40.0 37.0 40.0 33.0 40.0 22 37.757682715565046 40.0 37.0 40.0 33.0 40.0 23 37.68662718463439 40.0 37.0 40.0 33.0 40.0 24 37.63047837452226 40.0 37.0 40.0 33.0 40.0 25 37.56765355577802 40.0 37.0 40.0 33.0 40.0 26 37.42285632513921 39.0 36.0 40.0 33.0 40.0 27 37.27273405291935 39.0 36.0 40.0 33.0 40.0 28 37.136746000609996 39.0 36.0 40.0 32.0 40.0 29 36.86186301266865 39.0 35.0 40.0 32.0 40.0 30 36.816910008495086 39.0 35.0 40.0 31.0 40.0 31 36.77380094094734 39.0 35.0 40.0 32.0 40.0 32 36.63284014142709 38.0 35.0 40.0 31.0 40.0 33 36.239372806876595 38.0 35.0 40.0 31.0 40.0 34 36.127649408284924 38.0 35.0 40.0 30.0 40.0 35 35.96730635482046 38.0 35.0 40.0 30.0 40.0 36 35.84876505967478 38.0 34.0 40.0 30.0 40.0 37 35.51487428063127 37.0 34.0 40.0 29.0 40.0 38 35.42222995666355 37.0 34.0 40.0 29.0 40.0 39 35.02711999655588 37.0 34.0 40.0 28.0 40.0 40 34.925706513928965 36.0 33.0 40.0 28.0 40.0 41 34.85199088764235 36.0 33.0 39.0 28.0 40.0 42 34.785100434213426 36.0 33.0 39.0 28.0 40.0 43 34.58066419312765 36.0 33.0 39.0 28.0 40.0 44 35.025180861623504 36.0 34.0 39.0 29.0 40.0 45 35.15436071911709 36.0 34.0 40.0 29.0 40.0 46 35.098020906033206 35.0 34.0 39.0 30.0 40.0 47 34.79096089047405 35.0 34.0 39.0 29.0 40.0 48 34.70092208958464 35.0 34.0 39.0 29.0 40.0 49 34.554131151735795 35.0 33.0 39.0 28.0 40.0 50 34.11990135757636 35.0 33.0 39.0 27.0 40.0 51 34.17227134064076 35.0 33.0 38.0 27.0 40.0 52 33.78768049022884 35.0 33.0 38.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 1.0 13 2.0 14 5.0 15 15.0 16 38.0 17 94.0 18 201.0 19 383.0 20 722.0 21 1304.0 22 2179.0 23 3445.0 24 4944.0 25 7235.0 26 10119.0 27 13808.0 28 18615.0 29 24764.0 30 33104.0 31 44338.0 32 61559.0 33 89492.0 34 138281.0 35 187089.0 36 269957.0 37 327576.0 38 352165.0 39 57752.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 100.0 0.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 0.0 100.0 7 99.33330867474862 0.5335349677932608 0.11514750583468603 0.018008851623434307 8 99.47501468903806 0.30736319487942254 0.10932646288569715 0.1082956531968137 9 96.55230540586919 1.6451722634579784 0.7433956932771199 1.059126637395714 10 53.26727258064419 33.938863283710965 4.7381470528847816 8.055717082760072 11 32.56503651188554 22.08558267124023 25.068442731548657 20.280938085325577 12 26.946214169509986 17.768369786604204 28.71387087835294 26.57154516553288 13 23.36342287027139 17.85398762664558 31.793445141824257 26.989144361258777 14 25.91698101309189 17.270913157921864 31.201639108677053 25.610466720309194 15 25.311835089853258 18.616604888827176 28.90523766530094 27.166322356018625 16 28.16196324375193 26.85398702028694 22.41974691803062 22.56430281793051 17 30.152274845393706 19.521110072890373 23.978573711078596 26.348041370637326 18 29.387535327970294 19.090352894665198 24.1005124336871 27.421599343677407 19 29.05064246729756 19.097386654895224 24.58244628117214 27.269524596635076 20 29.27705678366761 19.328651840389426 24.97075835456094 26.423533021382024 21 31.205155988792065 18.638433799885885 25.426194329455264 24.730215881866783 22 30.72625393450963 18.26200635585127 24.87556004799935 26.13617966163975 23 28.38704357111283 20.75292765110609 24.930253597374225 25.929775180406857 24 28.13388883869587 19.681431297443773 24.709235872904802 27.475443990955554 25 28.241214318067847 20.198291402622743 24.34548132445705 27.21501295485235 26 27.923664298027695 21.117046014738154 24.353000171599497 26.606289515634657 27 28.50097835966648 18.61248165007164 23.317945972232412 29.568594018029472 28 28.873464472537712 20.016808261515205 24.30594674109517 26.803780524851913 29 29.913975899669477 19.98461061770361 22.98693479037272 27.114478692254192 30 28.263225136718717 19.337989763453432 24.679948750567704 27.71883634926015 31 29.369223297026597 20.78839963157649 22.611901971211303 27.230475100185608 32 30.427197853005328 20.677557272089494 23.89604830010387 24.99919657480131 33 30.722070059890044 20.026267456307313 23.208316330026456 26.043346153776188 34 29.494982079070382 22.414532233722152 24.304915931406285 23.785569755801184 35 28.362789225492048 23.533991555849575 24.477546236362237 23.625672982296148 36 29.709390494358136 22.72280496656235 22.69776235470889 24.87004218437062 37 30.682292933071952 23.0447814046783 21.46697558618206 24.805950076067692 38 30.487651809465138 23.358390093555077 22.744633877621062 23.409324219358727 39 29.83060158659802 22.91544510665545 21.98328996858456 25.27066333816197 40 28.02898879388597 23.53732652837243 23.49639732013735 24.93728735760425 41 26.815543882477993 22.717772189846038 23.545148554835134 26.921535372840832 42 27.562092640685815 20.613465163786564 23.776535012057444 28.047907183470176 43 26.98029152510719 20.113279921221885 25.69935889700938 27.20706965666155 44 26.954885098069415 20.364130490804875 25.8325152544675 26.84846915665821 45 27.482538387049633 20.767237715022354 25.343608282616486 26.406615615311523 46 27.42808738113097 21.371777279620467 24.101179428191674 27.098955911056887 47 27.23053573604966 21.846252915827115 24.542244703305684 26.380966644817544 48 28.72878730090972 20.041729601640565 25.698873810096963 25.53060928735275 49 26.574819502191684 22.311815080018118 25.00750368817643 26.105861729613768 50 24.768780291403836 23.029864982121513 25.74526024609672 26.456094480377928 51 27.361691109994062 22.319152019568406 23.89101552338756 26.428141347049973 52 27.833862583366738 22.498755448890336 23.446736547478793 26.220645420264145 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.5 10 1.0 11 1.0 12 1.0 13 103.0 14 826.5 15 1448.0 16 1935.0 17 2422.0 18 2537.0 19 2652.0 20 3240.5 21 3829.0 22 3837.5 23 3846.0 24 3958.0 25 4070.0 26 4080.0 27 4090.0 28 5827.0 29 7564.0 30 8833.5 31 10103.0 32 10041.5 33 9980.0 34 11532.5 35 13085.0 36 15524.5 37 17964.0 38 20736.0 39 24975.5 40 26443.0 41 30571.0 42 34699.0 43 37632.5 44 40566.0 45 41164.0 46 41762.0 47 46486.5 48 51211.0 49 53454.5 50 55698.0 51 61592.0 52 67486.0 53 71493.0 54 75500.0 55 80627.5 56 85755.0 57 95382.5 58 105010.0 59 118708.5 60 132407.0 61 144445.0 62 156483.0 63 147976.0 64 138026.5 65 136584.0 66 127520.5 67 118457.0 68 105296.0 69 92135.0 70 79623.0 71 67111.0 72 55370.5 73 43630.0 74 37159.0 75 30688.0 76 27540.0 77 24392.0 78 18699.5 79 13007.0 80 8395.0 81 3783.0 82 2666.0 83 1549.0 84 977.0 85 405.0 86 263.5 87 122.0 88 83.5 89 29.0 90 13.0 91 11.5 92 10.0 93 5.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1649189.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.057509951721055 #Duplication Level Percentage of deduplicated Percentage of total 1 72.7417145388855 7.316005178800931 2 9.60628254230644 1.9323056453658252 3 3.700525244706775 1.1165420842570015 4 1.920382066834753 0.772570469931887 5 1.1136788534770994 0.5600418075933611 6 0.679083041747495 0.4097930670252261 7 0.4263885488103321 0.300188495107187 8 0.32761142756593825 0.26359641544335727 9 0.24013426123433618 0.21736374499021677 >10 3.8422827628572818 10.802495434220171 >50 2.86019930417139 21.013044718314568 >100 2.403276668550305 42.21498522605996 >500 0.10638795695058104 7.230099513323443 >1k 0.03137080781876108 5.494096452141817 >5k 6.819740830165451E-4 0.35687174742504935 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AGGGTCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 5203 0.3154884006623862 No Hit AGGGTCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 4234 0.2567322483960298 No Hit AGGGTCGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 3637 0.2205326375570053 No Hit AGGGTCGGGATGACTCTGTATTTCGTTTTTGAGACTGTATTCCCCAGCATAT 3459 0.2097394537557551 No Hit AGGGTCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 3408 0.20664702468910476 No Hit AGGGTCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 3275 0.1985824547701931 No Hit AGGGTCGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 3234 0.19609638434406246 No Hit AGGGTCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 2583 0.1566224368462317 No Hit AGGGTCGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 2515 0.15249919809069792 No Hit AGGGTCGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTGC 2377 0.14413144885152643 No Hit AGGGTCGGGACATAGTATAAAAATTCGCCATTTTAAAAAGTGTAAAATTTGT 2283 0.1384316776306415 No Hit AGGGTCGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 2224 0.1348541616515754 No Hit AGGGTCGGGATACAAAAACTACTCCAGTGTCTTGTACTGACTGCTGCCAATC 2101 0.12739595037318344 No Hit AGGGTCGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 1898 0.11508686997063405 No Hit AGGGTCGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCA 1875 0.1136922450974388 No Hit AGGGTCGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 1852 0.11229762022424356 No Hit AGGGTCGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 1781 0.10799247387655386 No Hit AGGGTCGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 1779 0.10787120214844995 No Hit AGGGTCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 1672 0.10138316469488942 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 1.819075921559021E-4 0.0 0.0 0.0 0.0 8 6.063586405196736E-4 0.0 0.0 0.0 0.0 9 7.276303686236084E-4 0.0 0.0 0.0 0.0 10 0.004305146347689683 0.0 0.0 0.0 0.0 11 0.006063586405196736 0.0 0.0 0.0 0.0 12 0.008549656831327399 0.0 0.0 0.0 0.0 13 0.011096363121510027 0.0 0.0 0.0 0.0 14 0.015886596381615447 0.0 0.0 0.0 0.0 15 0.021707639330604316 0.0 0.0 0.0 0.0 16 0.03147001344297106 0.0 0.0 0.0 0.0 17 0.036017703246868614 0.0 0.0 0.0 0.0 18 0.04044412132266223 0.0 0.0 0.0 0.0 19 0.046143892543547164 0.0 0.0 0.0 0.0 20 0.05014585957097701 0.0 0.0 0.0 0.0 21 0.05475418523892653 0.0 0.0 0.0 0.0 22 0.05978696195523982 0.0 0.0 0.0 0.0 23 0.06330384207025393 0.0 0.0 0.0 0.0 24 0.06785153187415148 0.0 0.0 0.0 0.0 25 0.07148968371726952 0.0 0.0 0.0 0.0 26 0.07464274864797182 0.0 0.0 0.0 0.0 27 0.07828090049108986 0.0 0.0 0.0 0.0 28 0.08313176961524725 0.0 0.0 0.0 0.0 29 0.08725500837078103 0.0 0.0 0.0 0.0 30 0.0930760513197699 0.0 0.0 0.0 0.0 31 0.09913963772496663 0.0 0.0 0.0 0.0 32 0.10677975659551452 0.0 0.0 0.0 0.0 33 0.11047854430268453 0.0 0.0 0.0 0.0 34 0.11520814169873798 0.0 0.0 0.0 0.0 35 0.12472797235489687 0.0 0.0 0.0 0.0 36 0.13303508573001638 0.0 0.0 0.0 0.0 37 0.13934121559142099 0.0 0.0 0.0 0.0 38 0.1454654378606697 0.0 0.0 0.0 0.0 39 0.1526811056828538 0.0 0.0 0.0 0.0 40 0.1591691431364143 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATACGA 35 1.01992555E-7 46.000004 9 CTAGCGT 35 1.01992555E-7 46.000004 22 TAATACG 20 6.312258E-4 46.0 13 CGTATAT 60 0.0 46.0 46 GTCGACA 40 5.6134013E-9 46.0 10 TAGCGTA 45 3.110472E-10 46.0 40 TAGCGAT 25 3.4178072E-5 46.0 26 CCAATCG 30 1.8618994E-6 46.0 34 CGACCAA 25 3.4178072E-5 46.0 18 ATTCGTT 25 3.4178072E-5 46.0 39 TTATCGA 20 6.312258E-4 46.0 20 TACGATA 30 1.8618994E-6 46.0 38 AACGCGT 25 3.4178072E-5 46.0 35 TCGTATT 50 1.6370905E-11 46.0 43 ACGTCGT 60 0.0 46.0 16 CATCGTA 40 5.6134013E-9 46.0 38 TTACGAC 20 6.312258E-4 46.0 15 CCGGTTA 25 3.4178072E-5 46.0 24 ACGTAAA 20 6.312258E-4 46.0 11 TGTACGG 25 3.4178072E-5 46.0 39 >>END_MODULE