##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527064_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1604300 Sequences flagged as poor quality 0 Sequence length 52 %GC 58 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.60399052546282 31.0 31.0 33.0 30.0 34.0 2 32.33928379978807 33.0 31.0 34.0 31.0 34.0 3 32.892422240229386 34.0 31.0 34.0 31.0 34.0 4 36.41376425855513 37.0 37.0 37.0 35.0 37.0 5 33.62276569220221 35.0 33.0 35.0 32.0 35.0 6 35.243111637474286 35.0 35.0 37.0 35.0 37.0 7 36.18621766502525 37.0 35.0 37.0 35.0 37.0 8 36.59545783207629 37.0 37.0 37.0 35.0 37.0 9 38.61031727233061 39.0 39.0 39.0 38.0 39.0 10 38.03625755781338 39.0 38.0 39.0 37.0 39.0 11 37.60223274948576 39.0 37.0 39.0 35.0 39.0 12 37.23180078538927 39.0 37.0 39.0 34.0 39.0 13 37.11566165929066 39.0 37.0 39.0 34.0 39.0 14 38.0129196534314 40.0 38.0 40.0 34.0 40.0 15 38.0875172972636 40.0 38.0 40.0 34.0 40.0 16 38.14368073302998 40.0 38.0 40.0 34.0 40.0 17 38.08477840802843 40.0 38.0 40.0 34.0 40.0 18 38.043295518294585 40.0 38.0 40.0 34.0 40.0 19 37.97694196845976 40.0 38.0 40.0 34.0 40.0 20 37.88480022439693 40.0 38.0 40.0 34.0 40.0 21 33.54065324440566 39.0 34.0 40.0 10.0 40.0 22 34.14691267219348 39.0 34.0 40.0 16.0 40.0 23 36.15455089447111 39.0 34.0 40.0 30.0 40.0 24 36.96953125973945 39.0 35.0 40.0 31.0 40.0 25 37.28629558062706 39.0 36.0 40.0 33.0 40.0 26 37.340400797855764 39.0 36.0 40.0 33.0 40.0 27 37.28088823786075 39.0 36.0 40.0 33.0 40.0 28 37.153005048931 39.0 36.0 40.0 33.0 40.0 29 37.046816680172036 39.0 35.0 40.0 32.0 40.0 30 36.9327183195163 39.0 35.0 40.0 32.0 40.0 31 36.802734525961476 39.0 35.0 40.0 32.0 40.0 32 36.694248581936044 38.0 35.0 40.0 31.0 40.0 33 36.324178146232 38.0 35.0 40.0 31.0 40.0 34 36.196109829832324 38.0 35.0 40.0 30.0 40.0 35 36.03805896652746 38.0 35.0 40.0 30.0 40.0 36 35.85207442498286 38.0 34.0 40.0 30.0 40.0 37 35.72767063516799 38.0 34.0 40.0 30.0 40.0 38 35.57949884684909 37.0 34.0 40.0 30.0 40.0 39 35.398782646637166 37.0 34.0 40.0 29.0 40.0 40 30.58266596023188 35.0 29.0 39.0 8.0 40.0 41 31.355786324253568 35.0 29.0 39.0 12.0 40.0 42 33.05034843857134 35.0 30.0 39.0 23.0 40.0 43 33.821898647385154 35.0 32.0 39.0 26.0 40.0 44 34.74106962538178 36.0 33.0 39.0 28.0 40.0 45 35.062907186935114 36.0 34.0 39.0 29.0 40.0 46 35.11118057719878 35.0 34.0 39.0 30.0 40.0 47 35.0481119491367 35.0 34.0 39.0 30.0 40.0 48 34.875735211618775 35.0 34.0 39.0 29.0 40.0 49 34.68391572648507 35.0 34.0 39.0 29.0 40.0 50 34.61552826778034 35.0 34.0 39.0 29.0 40.0 51 34.42951069002057 35.0 34.0 39.0 29.0 40.0 52 33.990801595711524 35.0 33.0 38.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 2.0 13 3.0 14 6.0 15 21.0 16 43.0 17 94.0 18 226.0 19 435.0 20 698.0 21 1346.0 22 2205.0 23 3495.0 24 5262.0 25 7499.0 26 10502.0 27 14144.0 28 19448.0 29 25849.0 30 35069.0 31 48900.0 32 67371.0 33 95688.0 34 152318.0 35 190980.0 36 236982.0 37 269731.0 38 355018.0 39 60963.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 100.0 0.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 0.0 100.0 7 99.3374057221218 0.5346880259303123 0.1116374742878514 0.016268777660038647 8 99.50595275197905 0.299569905877953 0.08664214922396062 0.1078351929190301 9 96.53381537118992 1.6410895717758525 0.7765380539799289 1.0485570030542917 10 53.27220594651874 33.92538801969706 4.755906002617964 8.046500031166241 11 32.6231378171165 22.04949199027613 25.05161129464564 20.275758897961726 12 26.896652745745808 17.78844355793804 28.715763884560246 26.599139811755908 13 23.583743688836254 17.8422988219161 31.682291342018328 26.89166614722932 14 26.053730599015147 17.153150906937604 31.191485383033097 25.60163311101415 15 25.24141370067942 18.469488250327245 28.98217291030356 27.30692513868977 16 29.456211431777103 18.86442685283301 25.429720127158262 26.249641588231626 17 30.24465498971514 19.402605497724863 23.949947017390762 26.40279249516923 18 29.345321947266722 19.128342579318083 24.025369319952627 27.50096615346257 19 29.168422364894347 19.03403353487502 24.511874337717384 27.285669762513248 20 29.29664027924952 19.31683600324129 24.946144736021942 26.44037898148725 21 35.469862245215985 18.212242099357976 24.04282241476033 22.275073240665712 22 30.845103783581624 18.216231378171166 24.821043445739573 26.117621392507633 23 28.37854515988282 20.74468615595587 24.883001932306925 25.99376675185439 24 28.300193230692518 19.673003802281368 24.636913295518294 27.389889671507824 25 28.27046063703796 20.178956554260424 24.451598828149347 27.098983980552266 26 27.991335785077602 21.149971950383346 24.314654366390325 26.544037898148726 27 28.478713457582742 18.630742379854144 23.28878638658605 29.60175777597706 28 28.890294832637288 19.936233871470424 24.31664900579692 26.856822290095366 29 29.82708969644082 19.93486255687839 23.0614598267157 27.176587919965094 30 28.320451287165742 19.320575952128653 24.643146543663903 27.715826217041702 31 29.421928566976252 20.774543414573333 22.628311413077355 27.17521660537306 32 30.30393317957988 20.80327868852459 23.9073116000748 24.985476531820733 33 30.71807018637412 20.08365019011407 23.111575141806394 26.086704481705418 34 29.53618400548526 22.475347503584118 24.239917721124478 23.748550769806144 35 28.39200897587733 23.422489559309355 24.516798603752417 23.6687028610609 36 29.831764632550023 22.64401919840429 22.69943277441875 24.82478339462694 37 30.596459515053294 23.06738141245403 21.497974194352675 24.838184878139998 38 30.522096864676186 23.290781025992644 22.74400049865985 23.443121610671323 39 29.551891790812192 22.896216418375616 22.070685033971202 25.48120675684099 40 28.378919154771552 27.91921710403291 21.490992956429594 22.21087078476594 41 26.82603004425606 22.724365767001185 23.555382409773735 26.89422177896902 42 27.580190737393256 20.56036900829022 23.811007916225144 28.048432338091377 43 27.01358848095743 20.151218600012466 25.61272829271333 27.22246462631677 44 26.90313532381724 20.402106837873216 25.846537430655115 26.848220407654427 45 27.52166053730599 20.70853331671134 25.279062519478902 26.49074362650377 46 27.339151031602565 21.376799850402044 24.091317085333166 27.19273203266222 47 27.061148164308417 21.797855762637912 24.60144611356978 26.53954995948389 48 28.661409960730538 20.081842548151844 25.749735086953812 25.50701240416381 49 26.62120551019136 22.31889297512934 24.961353861497226 26.098547653182074 50 24.728230380851464 23.016144112697127 25.862681543352238 26.39294396309917 51 27.407654428722804 22.400486193355356 23.789440877641336 26.402418500280493 52 27.848906064950445 22.49635354983482 23.38359409088076 26.27114629433398 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 2.0 8 4.0 9 2.0 10 0.0 11 1.0 12 2.0 13 88.0 14 756.0 15 1338.0 16 1734.5 17 2131.0 18 2296.0 19 2461.0 20 3009.5 21 3558.0 22 3658.5 23 3759.0 24 3888.0 25 4017.0 26 3932.5 27 3848.0 28 5620.5 29 7393.0 30 8654.0 31 9915.0 32 9685.5 33 9456.0 34 10961.5 35 12467.0 36 14826.5 37 17186.0 38 19789.0 39 23800.5 40 25209.0 41 28837.5 42 32466.0 43 35885.5 44 39305.0 45 40072.5 46 40840.0 47 45108.0 48 49376.0 49 51112.5 50 52849.0 51 59224.0 52 65599.0 53 69678.0 54 73757.0 55 78729.5 56 83702.0 57 92850.5 58 101999.0 59 113988.5 60 125978.0 61 139734.0 62 153490.0 63 144952.5 64 135367.0 65 134319.0 66 125246.0 67 116173.0 68 103213.5 69 90254.0 70 78381.5 71 66509.0 72 54749.5 73 42990.0 74 36448.5 75 29907.0 76 26920.5 77 23934.0 78 18485.5 79 13037.0 80 8475.0 81 3913.0 82 2772.5 83 1632.0 84 998.0 85 364.0 86 248.0 87 132.0 88 81.0 89 20.5 90 11.0 91 6.5 92 2.0 93 3.0 94 4.0 95 3.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1604300.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.609015089973168 #Duplication Level Percentage of deduplicated Percentage of total 1 72.72437407839364 6.988096079281379 2 8.786311909524407 1.6885560744766197 3 3.640209343302244 1.0493647953135776 4 1.9517285421409774 0.7501675605185594 5 1.1074786561404295 0.5320889559338295 6 0.7086418536377558 0.40856101589950505 7 0.47399929427470855 0.3188266459925615 8 0.32587128150724526 0.25050416491136107 9 0.2526001145892779 0.218451448153559 >10 4.220761045110338 11.31533672607247 >50 3.142400980596853 21.80479726477186 >100 2.531108708984909 42.265846332701685 >500 0.10013834278239675 6.552289409354224 >1k 0.033628547949312346 5.4916812296205135 >5k 7.473010655402743E-4 0.3654322969982974 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AGGGTCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 5089 0.3172099981300256 No Hit AGGGTCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 4301 0.2680920027426292 No Hit AGGGTCGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 3546 0.2210309792432837 No Hit AGGGTCGGGATGACTCTGTATTTCGTTTTTGAGACTGTATTCCCCAGCATAT 3362 0.2095618026553637 No Hit AGGGTCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 3251 0.20264289721373807 No Hit AGGGTCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 3153 0.19653431403104157 No Hit AGGGTCGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 3086 0.19235803777348376 No Hit AGGGTCGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 2501 0.155893536121673 No Hit AGGGTCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 2345 0.14616966901452347 No Hit AGGGTCGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 2341 0.1459203390886991 No Hit AGGGTCGGGACATAGTATAAAAATTCGCCATTTTAAAAAGTGTAAAATTTGT 2225 0.13868977123979306 No Hit AGGGTCGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTGC 2186 0.13625880446300567 No Hit AGGGTCGGGATACAAAAACTACTCCAGTGTCTTGTACTGACTGCTGCCAATC 1888 0.11768372498909181 No Hit AGGGTCGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 1865 0.11625007791560182 No Hit AGGGTCGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 1853 0.11550208813812878 No Hit AGGGTCGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 1746 0.10883251262232749 No Hit AGGGTCGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCA 1701 0.10602755095680358 No Hit AGGGTCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 1678 0.1045939038833136 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 4.986598516486941E-4 0.0 0.0 0.0 0.0 8 6.856572960169544E-4 0.0 0.0 0.0 0.0 9 9.349872218413015E-4 0.0 0.0 0.0 0.0 10 0.006420245589976937 0.0 0.0 0.0 0.0 11 0.009287539736956929 0.0 0.0 0.0 0.0 12 0.01234183132830518 0.0 0.0 0.0 0.0 13 0.014772798105092563 0.0 0.0 0.0 0.0 14 0.018824409399738205 0.0 0.0 0.0 0.0 15 0.026615969581749048 0.0 0.0 0.0 0.0 16 0.03384653743065511 0.0 0.0 0.0 0.0 17 0.03640216917035467 0.0 0.0 0.0 0.0 18 0.04039144798354422 0.0 0.0 0.0 0.0 19 0.04512871657420682 0.0 0.0 0.0 0.0 20 0.04855700305429159 0.0 0.0 0.0 0.0 21 0.052172286978744625 0.0 0.0 0.0 0.0 22 0.056971888050863305 0.0 0.0 0.0 0.0 23 0.06127282927133329 0.0 0.0 0.0 0.0 24 0.06613476282490806 0.0 0.0 0.0 0.0 25 0.07049803652683413 0.0 0.0 0.0 0.0 26 0.07498597519167238 0.0 0.0 0.0 0.0 27 0.07841426167175715 0.0 0.0 0.0 0.0 28 0.08377485507698061 0.0 0.0 0.0 0.0 29 0.08726547403852147 0.0 0.0 0.0 0.0 30 0.09256373496228885 0.0 0.0 0.0 0.0 31 0.09854765318207317 0.0 0.0 0.0 0.0 32 0.10571588854952316 0.0 0.0 0.0 0.0 33 0.11051548962164184 0.0 0.0 0.0 0.0 34 0.11519042573084834 0.0 0.0 0.0 0.0 35 0.12316898335722745 0.0 0.0 0.0 0.0 36 0.13039955120613353 0.0 0.0 0.0 0.0 37 0.1361341395000935 0.0 0.0 0.0 0.0 38 0.14105840553512436 0.0 0.0 0.0 0.0 39 0.14722932119927695 0.0 0.0 0.0 0.0 40 0.154459889048183 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACCATA 35 1.01990736E-7 46.000004 40 TAGCGTA 35 1.01990736E-7 46.000004 40 ACGATTG 35 1.01990736E-7 46.000004 41 CTATGCG 25 3.4177654E-5 46.0 20 CGTATTG 20 6.3122064E-4 46.0 21 ACGCATA 20 6.3122064E-4 46.0 32 CACGCAT 25 3.4177654E-5 46.0 25 ATCGTAC 25 3.4177654E-5 46.0 25 GTAATCG 20 6.3122064E-4 46.0 13 AACGATT 30 1.8618666E-6 46.0 40 GTATACC 20 6.3122064E-4 46.0 36 CGTAACG 25 3.4177654E-5 46.0 46 CGCGTTA 50 1.6370905E-11 46.0 26 ATACGCT 25 3.4177654E-5 46.0 37 CGTCATA 45 3.110472E-10 46.0 27 TATCGCA 20 6.3122064E-4 46.0 19 TCGAATT 25 3.4177654E-5 46.0 11 ATACACG 25 3.4177654E-5 46.0 27 TGCGTAA 45 3.110472E-10 46.0 17 AGGGTCG 163400 0.0 44.850002 1 >>END_MODULE