SRR1527062_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1527062_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2581562
Sequences flagged as poor quality	0
Sequence length	52
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGTTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC	6297	0.24392209057926945	No Hit
GGGTTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT	5218	0.20212568979555787	No Hit
GGGTTTGGGAGCTGAACCCACCTCACCCACCCTCTCCTTCGCAGGCAGGGAC	4816	0.18655372212637156	No Hit
GGGTTTGGGGACTGGAGTTCAGATTTCTTCCAACGAAAGTTTTCTGTCTCTA	4430	0.17160153426491404	No Hit
GGGTTTGGGAGCTTCTTTGGGTCTGTGGATTGTACCATAGTTATCCTGCACT	3806	0.1474301217634905	No Hit
GGGTTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3513	0.13608040403445668	No Hit
GGGTTTGGGATCTTGACTTGCAAAGTACGGTGTAGAGACCTACTGTGTGCTT	3021	0.11702217494679577	No Hit
GGGTTTGGGGGGGGCTGGTGAAATGGCTCAGTGGGTAAGAGCACCCGACTGC	2782	0.10776421406884669	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGAACC	25	3.418348E-5	46.0	14
ATCGTTC	20	6.312923E-4	46.0	41
CGAATAT	25	3.418348E-5	46.0	32
CGCGTAC	25	3.418348E-5	46.0	38
TCGCGTA	25	3.418348E-5	46.0	37
ACGACCG	30	1.8623123E-6	46.0	31
TTGGGAT	47045	0.0	44.15198	5
GTTTGGG	261700	0.0	44.056824	3
TTTGGGA	125640	0.0	44.04489	4
GGTTTGG	267955	0.0	43.99403	2
TTGGGAC	21075	0.0	43.91554	5
GGGTTTG	270300	0.0	43.80381	1
TTTGGGG	104470	0.0	43.404327	4
TGGGATC	13480	0.0	43.372406	6
TTTGGGC	23430	0.0	43.349552	4
CGATTTA	85	0.0	43.294117	29
TTGGGAG	37110	0.0	42.96308	5
TTGGGGT	28470	0.0	42.905865	5
CGCGAAA	145	0.0	42.827583	12
TTGGGGC	19690	0.0	42.729305	5