##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527062_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2581562 Sequences flagged as poor quality 0 Sequence length 52 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.780428670704016 31.0 31.0 33.0 31.0 33.0 2 32.57855282964345 34.0 31.0 34.0 31.0 34.0 3 33.09211438656131 34.0 31.0 34.0 31.0 34.0 4 33.17755529404291 35.0 33.0 35.0 30.0 35.0 5 34.87846389124104 35.0 35.0 35.0 33.0 37.0 6 35.916277432035336 37.0 35.0 37.0 35.0 37.0 7 36.132372183972336 37.0 35.0 37.0 35.0 37.0 8 36.56077173432209 37.0 37.0 37.0 35.0 37.0 9 38.709699011683625 39.0 39.0 39.0 39.0 39.0 10 38.06355105939737 39.0 38.0 39.0 37.0 39.0 11 37.8537280917522 39.0 38.0 39.0 35.0 39.0 12 37.630723182321404 39.0 37.0 39.0 35.0 39.0 13 37.55818337890006 39.0 37.0 39.0 35.0 39.0 14 38.401305101330124 40.0 38.0 40.0 35.0 40.0 15 38.26755080838655 40.0 38.0 40.0 35.0 40.0 16 33.14256020192426 40.0 35.0 40.0 3.0 40.0 17 34.937960428608726 40.0 35.0 40.0 17.0 40.0 18 37.034405139214165 40.0 35.0 40.0 32.0 40.0 19 37.88983258972669 40.0 37.0 40.0 34.0 40.0 20 38.1223170313167 40.0 38.0 40.0 34.0 40.0 21 38.32871765233607 40.0 38.0 40.0 35.0 40.0 22 38.372563200109084 40.0 38.0 40.0 35.0 40.0 23 38.33010053603206 40.0 38.0 40.0 35.0 40.0 24 38.324485330974035 40.0 38.0 40.0 35.0 40.0 25 38.2536278423683 40.0 38.0 40.0 35.0 40.0 26 38.16192057366819 40.0 38.0 40.0 35.0 40.0 27 38.036029349672795 40.0 38.0 40.0 34.0 40.0 28 38.00825004396563 40.0 38.0 40.0 34.0 40.0 29 37.82876181164737 40.0 38.0 40.0 34.0 40.0 30 37.81461495017358 40.0 37.0 40.0 34.0 40.0 31 37.77546927015504 40.0 37.0 40.0 34.0 40.0 32 37.73294966380819 40.0 37.0 40.0 34.0 40.0 33 37.3916260775453 40.0 37.0 40.0 33.0 40.0 34 37.365220358837014 40.0 37.0 40.0 33.0 40.0 35 37.369140466120896 40.0 36.0 40.0 33.0 40.0 36 37.34345446671434 40.0 36.0 40.0 33.0 40.0 37 37.09944676904912 39.0 36.0 40.0 33.0 40.0 38 37.11952492328288 39.0 35.0 40.0 33.0 40.0 39 36.80801119632223 39.0 35.0 40.0 32.0 40.0 40 36.83320059715785 39.0 35.0 40.0 32.0 40.0 41 36.824187836666326 39.0 35.0 40.0 32.0 40.0 42 36.779201506684714 39.0 35.0 40.0 32.0 40.0 43 36.73491514052345 39.0 35.0 40.0 32.0 40.0 44 36.97401340738669 39.0 35.0 40.0 33.0 40.0 45 37.01976981377941 40.0 35.0 40.0 33.0 40.0 46 36.97135803827295 40.0 35.0 40.0 33.0 40.0 47 36.7226074756291 39.0 35.0 40.0 32.0 40.0 48 36.71701241341482 39.0 35.0 40.0 32.0 40.0 49 36.69541696073927 39.0 35.0 40.0 32.0 40.0 50 36.19789801678209 39.0 35.0 40.0 31.0 40.0 51 36.29697369267134 39.0 35.0 40.0 31.0 40.0 52 35.992541337376366 38.0 35.0 40.0 31.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 6.0 15 11.0 16 31.0 17 52.0 18 135.0 19 318.0 20 553.0 21 976.0 22 1647.0 23 2696.0 24 4364.0 25 6466.0 26 9507.0 27 13795.0 28 19379.0 29 26014.0 30 34201.0 31 45151.0 32 61604.0 33 88913.0 34 141118.0 35 177622.0 36 294286.0 37 504843.0 38 894213.0 39 253659.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 100.0 0.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 100.0 0.0 7 99.71191859812005 0.11361338600428732 0.14603561719610064 0.028432398679559122 8 99.50832093128113 0.24934516389689654 0.12535046611315165 0.11698343870881273 9 97.65843315016257 1.0783006567341789 0.48544253440358975 0.7778236586996554 10 39.20823904287404 47.59908923357254 4.238906522485224 8.95376520106819 11 28.1314568466688 22.45710155324567 32.38895676338589 17.022484836699643 12 27.152902002740976 18.275214773071497 28.746123470983846 25.82575975320368 13 23.948407979355135 18.587816213594717 32.52747755041327 24.936298256636874 14 25.732599100854443 21.822369557655406 30.053703920339704 22.39132742115045 15 26.211611419752845 23.22888235881997 29.51364329038001 21.04586293104717 16 27.472359757387192 32.71023512121731 22.939174034944735 16.87823108645076 17 27.501450672112465 23.16880245370826 25.749410628139085 23.580336246040186 18 25.29642906116529 23.246739764530155 28.167713965420937 23.289117208883614 19 25.707846644783274 24.05400296409693 28.130023605863425 22.108126785256367 20 25.859770170152803 25.41941661676148 26.897204095814857 21.823609117270863 21 25.58195387133836 24.06721202124915 29.260734392588674 21.090099714823815 22 25.143304712418296 23.190804636882632 29.61269185090267 22.0531987997964 23 23.45413358269141 25.754407602838903 29.08374852124411 21.707710293225574 24 24.16269684787737 24.64562152681206 28.489379685632187 22.70230193967838 25 24.256361071320388 26.837511553082976 26.992766394919045 21.91336098067759 26 24.524803200542927 26.577668868692676 27.032199885185793 21.865328045578607 27 22.160188289105587 25.188393693430566 27.698346969780314 24.953071047683533 28 23.72613944580839 25.981905528513355 27.17606627305484 23.115888752623412 29 25.561423665207343 25.69180984225829 26.991759252731484 21.75500723980288 30 24.46445214176533 24.918634532116602 27.652328319056448 22.964585007061615 31 25.250642827869328 25.812589432289446 26.518712314482475 22.418055425358755 32 26.24046991705022 25.161355799318397 27.36808180473682 21.230092478894562 33 25.680576333243206 25.99356513614626 27.26353269842057 21.06232583218997 34 23.573944766772982 26.99621392009954 28.684261698924914 20.745579614202565 35 23.6952666641359 28.913425282832645 27.476620743565327 19.914687309466128 36 23.241161746260598 27.44233917295033 27.37451202024201 21.941987060547063 37 24.537005115507586 28.12913267238982 25.81049767543836 21.523364536664236 38 23.46505720180263 28.035933283802596 26.744273428257774 21.754736086136997 39 25.1771214481775 26.54966256863093 26.024786543960595 22.248429439230975 40 23.337033935268646 27.759472753317567 26.012119794140137 22.89137351727365 41 22.445209528184872 28.52052362097056 26.53680213762056 22.49746471322401 42 22.139464401784657 27.695635433121495 26.82949315182049 23.33540701327336 43 22.937585849187432 27.68974752494807 26.42295633418837 22.949710291676126 44 22.997936907965023 27.50997264446874 26.630776250967436 22.861314196598805 45 23.203277705513173 27.362116424087436 25.731204596287053 23.70340127411234 46 22.33535355726494 28.569873588160966 25.788572964739952 23.30619988983414 47 22.700984907586957 28.352020985744293 27.099523466800335 21.847470639868423 48 22.31184066080923 28.089234347267272 26.95348784960423 22.645437142319263 49 23.571814273683916 28.01412478181814 25.976676136385645 22.4373848081123 50 22.448618317127384 28.76037840656161 26.036601096545425 22.754402179765584 51 21.232222971983628 29.089055385847796 26.45987196898622 23.21884967318236 52 21.487533516529915 28.147493649193784 27.499087761595497 22.865885072680804 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 40.0 6 80.0 7 82.0 8 84.0 9 111.5 10 139.0 11 1904.5 12 3670.0 13 9523.5 14 18874.0 15 22371.0 16 19252.5 17 16134.0 18 15793.0 19 15452.0 20 14505.5 21 13559.0 22 14468.0 23 15377.0 24 16572.5 25 17768.0 26 22530.0 27 27292.0 28 29967.0 29 32642.0 30 36727.0 31 40812.0 32 46393.5 33 51975.0 34 57215.0 35 62455.0 36 64974.0 37 67493.0 38 74449.0 39 94734.5 40 108064.0 41 106441.5 42 104819.0 43 111864.0 44 118909.0 45 118743.0 46 118577.0 47 129823.0 48 141069.0 49 145278.5 50 149488.0 51 150668.0 52 151848.0 53 161034.5 54 170221.0 55 171670.5 56 173120.0 57 175454.0 58 177788.0 59 172984.5 60 168181.0 61 156371.5 62 144562.0 63 135530.0 64 109462.5 65 92427.0 66 75392.5 67 58358.0 68 48078.0 69 37798.0 70 29113.0 71 20428.0 72 18428.0 73 16428.0 74 13787.5 75 11147.0 76 7121.5 77 3096.0 78 2454.0 79 1812.0 80 1889.5 81 1967.0 82 1393.0 83 819.0 84 422.5 85 26.0 86 19.0 87 12.0 88 9.5 89 5.0 90 3.0 91 2.0 92 1.0 93 2.5 94 4.0 95 2.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2581562.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.805861502104464 #Duplication Level Percentage of deduplicated Percentage of total 1 69.20509920551768 5.4020541963767075 2 10.098579106551501 1.5765621974757373 3 4.168057197908767 0.9760583165917636 4 2.203431300999314 0.6879871826001 5 1.239123733965577 0.4836214125652915 6 0.7759584570693083 0.3634214548361816 7 0.49294619882271007 0.26935088291992476 8 0.3374472119646109 0.21072529606936327 9 0.2691021070694446 0.18905163999377142 >10 4.065829025739944 8.722180876648935 >50 3.3820246188311254 19.30194945024116 >100 3.613583558924369 51.21646558787748 >500 0.11779052783900393 6.163902133595713 >1k 0.029878572915259534 3.9202039022680784 >5k 0.0011491758813561358 0.5164654699397845 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGGTTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 6297 0.24392209057926945 No Hit GGGTTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 5218 0.20212568979555787 No Hit GGGTTTGGGAGCTGAACCCACCTCACCCACCCTCTCCTTCGCAGGCAGGGAC 4816 0.18655372212637156 No Hit GGGTTTGGGGACTGGAGTTCAGATTTCTTCCAACGAAAGTTTTCTGTCTCTA 4430 0.17160153426491404 No Hit GGGTTTGGGAGCTTCTTTGGGTCTGTGGATTGTACCATAGTTATCCTGCACT 3806 0.1474301217634905 No Hit GGGTTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3513 0.13608040403445668 No Hit GGGTTTGGGATCTTGACTTGCAAAGTACGGTGTAGAGACCTACTGTGTGCTT 3021 0.11702217494679577 No Hit GGGTTTGGGGGGGGCTGGTGAAATGGCTCAGTGGGTAAGAGCACCCGACTGC 2782 0.10776421406884669 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 7.747247596610115E-5 0.0 0.0 0.0 0.0 9 4.260986178135563E-4 0.0 0.0 0.0 0.0 10 0.009335433353915188 0.0 0.0 0.0 0.0 11 0.015920593811033786 0.0 0.0 0.0 0.0 12 0.021188722176728663 0.0 0.0 0.0 0.0 13 0.025410972116881175 0.0 0.0 0.0 0.0 14 0.03652827241801669 0.0 0.0 0.0 0.0 15 0.04745189152923695 0.0 0.0 0.0 0.0 16 0.0637985839580843 0.0 0.0 0.0 0.0 17 0.0713134141267961 0.0 0.0 0.0 0.0 18 0.0778211021079486 0.0 0.0 0.0 0.0 19 0.0880087326974909 0.0 0.0 0.0 0.0 20 0.09509746424838915 0.0 0.0 0.0 0.0 21 0.10121778984971114 0.0 0.0 0.0 0.0 22 0.10873262001842296 0.0 0.0 0.0 0.0 23 0.11586008780730427 0.0 0.0 0.0 0.0 24 0.1250793124472703 0.0 0.0 0.0 0.0 25 0.13193562657027025 0.0 0.0 0.0 0.0 26 0.1389468856452024 0.0 0.0 0.0 0.0 27 0.14739138552550743 0.0 0.0 0.0 0.0 28 0.1596320367281514 0.0 0.0 0.0 0.0 29 0.16761170175265983 0.0 0.0 0.0 0.0 30 0.1758625204430496 0.0 0.0 0.0 0.0 31 0.1831449331838631 0.0 0.0 0.0 0.0 32 0.19131827939828677 0.0 0.0 0.0 0.0 33 0.1974773412375918 0.0 0.0 0.0 0.0 34 0.20534079754815107 0.0 0.0 0.0 0.0 35 0.22238474226069332 0.0 0.0 0.0 0.0 36 0.2320300655184729 0.0 0.0 0.0 0.0 37 0.23954489568718473 0.0 0.0 0.0 0.0 38 0.2501586248945406 0.0 0.0 0.0 0.0 39 0.2585256522988795 0.0 0.0 0.0 0.0 40 0.26611795494355744 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAACC 25 3.418348E-5 46.0 14 ATCGTTC 20 6.312923E-4 46.0 41 CGAATAT 25 3.418348E-5 46.0 32 CGCGTAC 25 3.418348E-5 46.0 38 TCGCGTA 25 3.418348E-5 46.0 37 ACGACCG 30 1.8623123E-6 46.0 31 TTGGGAT 47045 0.0 44.15198 5 GTTTGGG 261700 0.0 44.056824 3 TTTGGGA 125640 0.0 44.04489 4 GGTTTGG 267955 0.0 43.99403 2 TTGGGAC 21075 0.0 43.91554 5 GGGTTTG 270300 0.0 43.80381 1 TTTGGGG 104470 0.0 43.404327 4 TGGGATC 13480 0.0 43.372406 6 TTTGGGC 23430 0.0 43.349552 4 CGATTTA 85 0.0 43.294117 29 TTGGGAG 37110 0.0 42.96308 5 TTGGGGT 28470 0.0 42.905865 5 CGCGAAA 145 0.0 42.827583 12 TTGGGGC 19690 0.0 42.729305 5 >>END_MODULE