SRR1527061_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1527061_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2507342
Sequences flagged as poor quality	0
Sequence length	52
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGTTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC	5924	0.23626613361878834	No Hit
GGGTTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT	5152	0.20547655644902052	No Hit
GGGTTTGGGAGCTGAACCCACCTCACCCACCCTCTCCTTCGCAGGCAGGGAC	4286	0.17093798931298562	No Hit
GGGTTTGGGAGCTTCTTTGGGTCTGTGGATTGTACCATAGTTATCCTGCACT	3837	0.15303057979326315	No Hit
GGGTTTGGGGACTGGAGTTCAGATTTCTTCCAACGAAAGTTTTCTGTCTCTA	3817	0.15223292235363187	No Hit
GGGTTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3238	0.12914073947630597	No Hit
GGGTTTGGGGGGGGCTGGTGAAATGGCTCAGTGGGTAAGAGCACCCGACTGC	2748	0.10959813220533934	No Hit
GGGTTTGGGATCTTGACTTGCAAAGTACGGTGTAGAGACCTACTGTGTGCTT	2619	0.10445324171971754	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCGTA	35	1.0202166E-7	46.000004	13
CGCGAAA	155	0.0	46.0	12
ACCCGAT	20	6.312888E-4	46.0	10
ATACGGC	20	6.312888E-4	46.0	37
GCGTATC	20	6.312888E-4	46.0	34
ATCGCGA	20	6.312888E-4	46.0	16
TTGGGAT	45495	0.0	44.038464	5
GTTTGGG	254195	0.0	44.031116	3
GGTTTGG	260325	0.0	43.983826	2
TTTGGGA	121385	0.0	43.94983	4
GGGTTTG	262355	0.0	43.831104	1
TTGGGAC	20420	0.0	43.75857	5
TTTGGGG	101825	0.0	43.52664	4
TGGGATC	13100	0.0	43.36641	6
TTTGGGC	22770	0.0	43.303032	4
TTGGGGT	28215	0.0	42.910507	5
TTGGGAG	36565	0.0	42.703953	5
CTTCGCA	550	0.0	42.65455	37
TTGGGGC	19590	0.0	42.595203	5
TGGGATT	17410	0.0	42.55198	6