##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527061_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2507342 Sequences flagged as poor quality 0 Sequence length 52 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.76709359951694 31.0 31.0 33.0 31.0 33.0 2 32.57991450707562 34.0 31.0 34.0 31.0 34.0 3 33.05124550220911 34.0 31.0 34.0 31.0 34.0 4 33.200929909043126 35.0 33.0 35.0 30.0 35.0 5 34.897374191474476 35.0 35.0 35.0 33.0 37.0 6 35.91746598589263 37.0 35.0 37.0 35.0 37.0 7 36.12802840617674 37.0 35.0 37.0 35.0 37.0 8 36.577791940628764 37.0 37.0 37.0 35.0 37.0 9 38.65125100604545 39.0 39.0 39.0 39.0 39.0 10 38.05652320265843 39.0 38.0 39.0 37.0 39.0 11 37.77727848853487 39.0 38.0 39.0 35.0 39.0 12 37.59123087317167 39.0 37.0 39.0 35.0 39.0 13 37.461370247856095 39.0 37.0 39.0 35.0 39.0 14 38.328035425562206 40.0 38.0 40.0 35.0 40.0 15 38.36991363762901 40.0 38.0 40.0 35.0 40.0 16 38.396661085723444 40.0 38.0 40.0 35.0 40.0 17 38.4147140677259 40.0 38.0 40.0 35.0 40.0 18 38.419316551152576 40.0 38.0 40.0 35.0 40.0 19 38.39353745918985 40.0 38.0 40.0 35.0 40.0 20 38.35083127870071 40.0 38.0 40.0 35.0 40.0 21 34.09439039429005 40.0 35.0 40.0 10.0 40.0 22 34.886498132285105 40.0 35.0 40.0 17.0 40.0 23 36.963369975057255 40.0 35.0 40.0 31.0 40.0 24 37.73508400529325 40.0 37.0 40.0 34.0 40.0 25 37.97320549011663 40.0 38.0 40.0 34.0 40.0 26 38.04558771798981 40.0 38.0 40.0 34.0 40.0 27 37.99689751138855 40.0 38.0 40.0 34.0 40.0 28 37.975765172840404 40.0 38.0 40.0 34.0 40.0 29 37.96922278652055 40.0 38.0 40.0 34.0 40.0 30 37.874410431444936 40.0 37.0 40.0 34.0 40.0 31 37.74331782421385 40.0 37.0 40.0 34.0 40.0 32 37.73310382069937 40.0 37.0 40.0 34.0 40.0 33 37.41156730912656 40.0 37.0 40.0 33.0 40.0 34 37.363552718376674 40.0 36.0 40.0 33.0 40.0 35 37.36125187549205 40.0 36.0 40.0 33.0 40.0 36 37.267788359146856 40.0 36.0 40.0 33.0 40.0 37 37.236469137437176 39.0 36.0 40.0 33.0 40.0 38 37.186193586674655 39.0 36.0 40.0 33.0 40.0 39 37.10783849989351 39.0 35.0 40.0 33.0 40.0 40 32.16508836847945 38.0 33.0 40.0 9.0 40.0 41 33.168324464712036 38.0 32.0 40.0 15.0 40.0 42 35.06896227160076 38.0 33.0 40.0 26.0 40.0 43 36.001715761152646 38.0 35.0 40.0 30.0 40.0 44 36.67164152317474 39.0 35.0 40.0 32.0 40.0 45 36.88875909229774 39.0 35.0 40.0 33.0 40.0 46 36.93043549703231 39.0 35.0 40.0 33.0 40.0 47 36.930826349177735 39.0 35.0 40.0 33.0 40.0 48 36.82570347403745 39.0 35.0 40.0 32.0 40.0 49 36.73893389892564 39.0 35.0 40.0 32.0 40.0 50 36.629381632023076 39.0 35.0 40.0 32.0 40.0 51 36.46255317383907 39.0 35.0 40.0 32.0 40.0 52 36.09897891871153 38.0 35.0 40.0 31.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 0.0 14 1.0 15 10.0 16 33.0 17 87.0 18 164.0 19 315.0 20 542.0 21 1091.0 22 1716.0 23 2999.0 24 4540.0 25 6943.0 26 9900.0 27 14635.0 28 20684.0 29 27800.0 30 37494.0 31 51037.0 32 69982.0 33 89443.0 34 163880.0 35 227143.0 36 336333.0 37 314092.0 38 862440.0 39 264036.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 100.0 0.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 100.0 0.0 7 99.71511664543569 0.11227028462810419 0.14361822200561392 0.02899484793059742 8 99.52515452618749 0.2510227962519672 0.10923918635750526 0.11458349120303493 9 97.61001889650474 1.0704164011132107 0.5383788888791398 0.7811858135029046 10 39.29320371931711 47.52231646101728 4.250836144411093 8.933643675254514 11 28.19419927556751 22.418561169557243 32.38732490422128 16.99991465065396 12 27.136545393488404 18.29459244091951 28.766997082966743 25.801865082625348 13 24.186369470140093 18.511276084395348 32.44324069073944 24.859113754725122 14 25.761344084692077 21.83375861769156 30.072443248667312 22.332454048949046 15 26.219518518016287 23.103031018504854 29.58012907692688 21.09732138655197 16 28.766358957015036 25.639262613556507 26.161369290667167 19.433009138761285 17 27.544985885451606 23.15061128477886 25.76190244489982 23.54250038486971 18 25.33116742749892 23.24712783497425 28.149929287667973 23.271775449858858 19 25.72748352637973 24.105287591401574 28.034627904769273 22.132600977449428 20 25.78607146532065 25.48100737753366 26.929752702263993 21.803168454881703 21 30.73234524847428 22.779979755454182 27.29994551999687 19.187729476074665 22 25.289769006382055 23.197314127869273 29.505308809089463 22.007608056659205 23 23.48877815631055 25.774385783830052 29.010242719182305 21.7265933406771 24 24.364566142153723 24.6326588076138 28.367211174223538 22.635563876008938 25 24.25357210942903 26.85684681228169 26.931667080119105 21.957913998170174 26 24.522382666584775 26.58073768955332 27.019728461454402 21.877151182407506 27 22.21424121639569 25.202505282486392 27.6397475892798 24.943505911838113 28 23.75703035325855 25.960239967264137 27.112017427219744 23.17071225225757 29 25.45273042129873 25.78662982552839 27.000026322695508 21.760613430477374 30 24.46028503490948 24.927632528789452 27.64138278703105 22.970699649270024 31 25.318684088568695 25.833930911698523 26.416141076885403 22.431243922847383 32 26.24552215054827 25.20880677625948 27.311511552871526 21.234159520320723 33 25.636949406981575 26.146054267826248 27.18404589401845 21.03295043117373 34 23.613212716893027 27.06431751232979 28.603078479122512 20.719391291654667 35 23.742114159137444 28.931832992866553 27.399572934206823 19.926479913789183 36 23.309265349521525 27.461550917266177 27.32255910841042 21.906624624801882 37 24.394956890603677 28.186541764147055 25.817140222594286 21.601361122654986 38 23.413718591241242 28.043960496812957 26.716498985778564 21.825821926167233 39 24.975093146447513 26.58420749941572 26.08371733891906 22.356982015217707 40 24.599316726637213 31.405727659011017 23.530495640403267 20.464459973948507 41 22.47495555053918 28.59741511130113 26.473333115306968 22.454296222852726 42 22.110386217755696 27.742725164736203 26.804480601369896 23.342408016138204 43 22.949840907223663 27.72784885348708 26.332347162852138 22.98996307643712 44 22.99965461432864 27.586543838056393 26.63250565738539 22.781295890229575 45 23.176973863158675 27.40515653628424 25.73366537153687 23.684204229020214 46 22.32595314081605 28.606229226009056 25.756318842822402 23.31149879035249 47 22.45593142060397 28.45359747493561 27.123344162862505 21.967126941597915 48 22.290377619008495 28.15714808749664 26.827572784247224 22.72490150924764 49 23.5421015561499 28.04858690996282 25.93224219113308 22.4770693427542 50 22.354668808642778 28.870971730222685 26.09815493857639 22.67620452255815 51 21.242973635028648 29.156373562122756 26.38244005006098 23.21821275278761 52 21.53208457402301 28.13046644614097 27.500436717448196 22.83701226238782 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 38.0 6 76.0 7 70.5 8 65.0 9 118.5 10 172.0 11 1796.5 12 3421.0 13 8814.5 14 17408.5 15 20609.0 16 18260.0 17 15911.0 18 15706.0 19 15501.0 20 14601.5 21 13702.0 22 14441.0 23 15180.0 24 16121.5 25 17063.0 26 21318.0 27 25573.0 28 28216.5 29 30860.0 30 34996.5 31 39133.0 32 44500.0 33 49867.0 34 54871.0 35 59875.0 36 61852.0 37 63829.0 38 71065.0 39 90894.0 40 103487.0 41 102823.5 42 102160.0 43 108970.5 44 115781.0 45 115289.5 46 114798.0 47 125491.5 48 136185.0 49 140390.0 50 144595.0 51 146277.5 52 147960.0 53 156520.5 54 165081.0 55 166440.0 56 167799.0 57 170788.5 58 173778.0 59 168703.5 60 163629.0 61 152108.5 62 140588.0 63 132759.0 64 108205.0 65 91480.0 66 74680.0 67 57880.0 68 48020.5 69 38161.0 70 29243.5 71 20326.0 72 18347.5 73 16369.0 74 13852.0 75 11335.0 76 7226.0 77 3117.0 78 2390.0 79 1663.0 80 1825.0 81 1987.0 82 1416.5 83 846.0 84 441.5 85 37.0 86 23.5 87 10.0 88 7.5 89 4.0 90 3.0 91 3.0 92 3.0 93 3.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2507342.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.159980414539238 #Duplication Level Percentage of deduplicated Percentage of total 1 70.05009500545825 5.716074032811521 2 9.72245468108251 1.5867007955775725 3 4.097260630368034 1.0030069949119753 4 2.119102105606602 0.6916732671263494 5 1.1757976202756613 0.47972427764556197 6 0.6963089208366499 0.34091202938976095 7 0.5017179903328036 0.28658062823163655 8 0.33292593852794655 0.2173335310304111 9 0.2715649951879018 0.1994368537806949 >10 4.104423534720918 9.37030230942823 >50 3.3873971214477017 20.14069030431632 >100 3.406375747085681 50.000486763685394 >500 0.10697043541413756 5.853998928038725 >1k 0.026455053919625417 3.59329531289379 >5k 0.0011502197356358878 0.519783971132072 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGGTTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 5924 0.23626613361878834 No Hit GGGTTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 5152 0.20547655644902052 No Hit GGGTTTGGGAGCTGAACCCACCTCACCCACCCTCTCCTTCGCAGGCAGGGAC 4286 0.17093798931298562 No Hit GGGTTTGGGAGCTTCTTTGGGTCTGTGGATTGTACCATAGTTATCCTGCACT 3837 0.15303057979326315 No Hit GGGTTTGGGGACTGGAGTTCAGATTTCTTCCAACGAAAGTTTTCTGTCTCTA 3817 0.15223292235363187 No Hit GGGTTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3238 0.12914073947630597 No Hit GGGTTTGGGGGGGGCTGGTGAAATGGCTCAGTGGGTAAGAGCACCCGACTGC 2748 0.10959813220533934 No Hit GGGTTTGGGATCTTGACTTGCAAAGTACGGTGTAGAGACCTACTGTGTGCTT 2619 0.10445324171971754 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 3.988287198156454E-5 0.0 0.0 0.0 0.0 8 7.976574396312908E-5 0.0 0.0 0.0 0.0 9 5.982430797234681E-4 0.0 0.0 0.0 0.0 10 0.012323807442303443 0.0 0.0 0.0 0.0 11 0.019462841527003494 0.0 0.0 0.0 0.0 12 0.02520597509234879 0.0 0.0 0.0 0.0 13 0.029632973882302453 0.0 0.0 0.0 0.0 14 0.03900544879797012 0.0 0.0 0.0 0.0 15 0.05037206731271601 0.0 0.0 0.0 0.0 16 0.062376811779166944 0.0 0.0 0.0 0.0 17 0.06915690001603292 0.0 0.0 0.0 0.0 18 0.07545839378912012 0.0 0.0 0.0 0.0 19 0.08507016593667717 0.0 0.0 0.0 0.0 20 0.0931265060769532 0.0 0.0 0.0 0.0 21 0.0998667114418376 0.0 0.0 0.0 0.0 22 0.1083218803019293 0.0 0.0 0.0 0.0 23 0.11621868895427907 0.0 0.0 0.0 0.0 24 0.12535186663805736 0.0 0.0 0.0 0.0 25 0.13253078359473897 0.0 0.0 0.0 0.0 26 0.1392311060876418 0.0 0.0 0.0 0.0 27 0.14692850038008376 0.0 0.0 0.0 0.0 28 0.15789629017501403 0.0 0.0 0.0 0.0 29 0.16451684692395374 0.0 0.0 0.0 0.0 30 0.17201482685648786 0.0 0.0 0.0 0.0 31 0.17967233827694826 0.0 0.0 0.0 0.0 32 0.18764891267326117 0.0 0.0 0.0 0.0 33 0.1941099379342746 0.0 0.0 0.0 0.0 34 0.20240557530644004 0.0 0.0 0.0 0.0 35 0.21815930973915804 0.0 0.0 0.0 0.0 36 0.2270930730630285 0.0 0.0 0.0 0.0 37 0.23415234140376542 0.0 0.0 0.0 0.0 38 0.2428468074957465 0.0 0.0 0.0 0.0 39 0.25022513881233593 0.0 0.0 0.0 0.0 40 0.25939819936809577 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGTA 35 1.0202166E-7 46.000004 13 CGCGAAA 155 0.0 46.0 12 ACCCGAT 20 6.312888E-4 46.0 10 ATACGGC 20 6.312888E-4 46.0 37 GCGTATC 20 6.312888E-4 46.0 34 ATCGCGA 20 6.312888E-4 46.0 16 TTGGGAT 45495 0.0 44.038464 5 GTTTGGG 254195 0.0 44.031116 3 GGTTTGG 260325 0.0 43.983826 2 TTTGGGA 121385 0.0 43.94983 4 GGGTTTG 262355 0.0 43.831104 1 TTGGGAC 20420 0.0 43.75857 5 TTTGGGG 101825 0.0 43.52664 4 TGGGATC 13100 0.0 43.36641 6 TTTGGGC 22770 0.0 43.303032 4 TTGGGGT 28215 0.0 42.910507 5 TTGGGAG 36565 0.0 42.703953 5 CTTCGCA 550 0.0 42.65455 37 TTGGGGC 19590 0.0 42.595203 5 TGGGATT 17410 0.0 42.55198 6 >>END_MODULE