##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527051_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1143552 Sequences flagged as poor quality 0 Sequence length 50 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.27710502014775 33.0 31.0 34.0 31.0 34.0 2 32.37364719750392 34.0 31.0 34.0 31.0 34.0 3 32.85191840860757 34.0 31.0 34.0 31.0 34.0 4 36.48846051600627 37.0 37.0 37.0 35.0 37.0 5 36.07652996977838 37.0 35.0 37.0 35.0 37.0 6 36.3033827932617 37.0 37.0 37.0 35.0 37.0 7 36.38467861540184 37.0 37.0 37.0 35.0 37.0 8 36.57178510465637 37.0 37.0 37.0 35.0 37.0 9 38.69369998041191 39.0 39.0 39.0 39.0 39.0 10 38.11228435611149 39.0 39.0 39.0 37.0 39.0 11 37.66271232090889 39.0 37.0 39.0 35.0 39.0 12 37.03645483546004 39.0 37.0 39.0 34.0 39.0 13 36.79561664008283 39.0 37.0 39.0 33.0 39.0 14 37.57698032096485 40.0 37.0 40.0 33.0 40.0 15 37.611932819845535 40.0 37.0 40.0 33.0 40.0 16 37.48551530669353 40.0 37.0 40.0 33.0 40.0 17 37.549599843295276 40.0 37.0 40.0 33.0 40.0 18 37.54205055826058 40.0 37.0 40.0 33.0 40.0 19 37.379643426796505 39.0 36.0 40.0 33.0 40.0 20 37.12628721737184 39.0 36.0 40.0 32.0 40.0 21 37.23007523925453 39.0 36.0 40.0 32.0 40.0 22 37.10056123376987 39.0 36.0 40.0 32.0 40.0 23 37.08022547291247 39.0 36.0 40.0 32.0 40.0 24 37.08709442159167 39.0 36.0 40.0 32.0 40.0 25 36.99218924893665 39.0 35.0 40.0 32.0 40.0 26 36.73906215021267 39.0 35.0 40.0 31.0 40.0 27 36.63854813773226 38.0 35.0 40.0 31.0 40.0 28 36.333031641761806 38.0 35.0 40.0 30.0 40.0 29 36.788086593351245 39.0 35.0 40.0 31.0 40.0 30 36.84350427440116 39.0 35.0 40.0 32.0 40.0 31 36.76091161573763 39.0 35.0 40.0 31.0 40.0 32 36.021773386780836 39.0 35.0 40.0 30.0 40.0 33 36.17094106783076 39.0 35.0 40.0 30.0 40.0 34 36.08255418205731 38.0 35.0 40.0 30.0 40.0 35 36.07389956906201 38.0 35.0 40.0 30.0 40.0 36 35.80643643664652 38.0 35.0 40.0 30.0 40.0 37 35.63632436478621 38.0 35.0 40.0 29.0 40.0 38 35.39741524653011 38.0 34.0 40.0 28.0 40.0 39 35.29991115401835 37.0 34.0 40.0 28.0 40.0 40 35.14221041107007 37.0 34.0 40.0 28.0 40.0 41 34.99891303587419 37.0 34.0 40.0 27.0 40.0 42 34.89044485952541 37.0 34.0 40.0 27.0 40.0 43 34.73295398897471 36.0 34.0 40.0 27.0 40.0 44 34.591249895063804 36.0 34.0 40.0 27.0 40.0 45 34.42755816963286 35.0 33.0 40.0 26.0 40.0 46 34.117642223528094 35.0 33.0 39.0 25.0 40.0 47 34.00818327456906 35.0 33.0 39.0 25.0 40.0 48 33.83436258254981 35.0 33.0 39.0 25.0 40.0 49 33.52572860700694 35.0 33.0 39.0 24.0 40.0 50 33.08407051012984 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 6.0 15 30.0 16 69.0 17 128.0 18 217.0 19 458.0 20 757.0 21 1376.0 22 2247.0 23 3244.0 24 4798.0 25 6639.0 26 8901.0 27 12176.0 28 16598.0 29 20561.0 30 25541.0 31 30897.0 32 38695.0 33 53426.0 34 88285.0 35 100168.0 36 141262.0 37 207597.0 38 289832.0 39 89642.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 0.0 0.0 100.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 0.0 100.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 0.0 100.0 7 98.71846667226326 0.5205709928363554 0.24336453436310723 0.5175978005372733 8 98.63915239534363 0.6670444369823147 0.359931161853593 0.33387200582046117 9 97.4253903626595 1.2758492836355495 0.38327946608462055 0.9154808876203269 10 62.71949154913813 25.599448035594357 4.128802188269532 7.552258226997985 11 34.142828660174615 25.714702960599954 20.106387816207747 20.036080563017684 12 31.798641426012985 14.643496753973583 27.763407348332215 25.794454471681217 13 22.83053153682561 16.12694481755093 31.438185583165435 29.604338062458023 14 24.016048242668457 17.408915379449294 31.324067466980075 27.250968910902174 15 24.598444145959256 17.469341140586522 29.47806483657936 28.45414987687486 16 27.968120382807253 18.883618759794047 25.754578716140585 27.393682141258115 17 30.816088817998654 18.34407180434296 22.89629155473472 27.943547822923666 18 29.56402507275576 18.739943614282517 23.545496837922546 28.150534475039173 19 29.240122005820464 18.15492430602194 23.665386445041413 28.939567243116187 20 30.59222492724424 19.44039274121334 22.75462768636669 27.212754645175735 21 30.38917338258339 18.26204667562122 25.54120844526528 25.80757149653011 22 31.366828967987466 17.461383478844862 23.952037161405865 27.21975039176181 23 28.59030459480636 19.971719694425786 24.21052999776136 27.227445713006492 24 28.997544492948286 19.907796059995523 23.263743144168345 27.830916302887843 25 28.43753497873293 20.16576421535706 21.945919381016342 29.450781424893663 26 28.96772512312514 20.30751553055742 22.205636473024402 28.51912287329304 27 30.906421395791362 18.022442355048128 22.382978648981418 28.688157600179093 28 29.657505736512203 20.544846233490038 21.090514467203942 28.707133562793825 29 30.459218295276475 18.681704023953436 21.854624888068056 29.004452792702036 30 28.573689696664427 19.57138809603761 22.311622033803445 29.543300173494515 31 30.65448707186031 19.046269867920305 21.99217875531677 28.307064304902617 32 32.14458109469442 19.911031592791584 22.754452792702036 25.189934519811953 33 32.93964769420192 19.796651136109244 21.306770483546003 25.956930686142826 34 31.12853634989926 20.963366773002015 22.538459116856952 25.369637760241776 35 30.269546115961493 22.34310289344079 23.38678083725095 24.000570153346764 36 31.26731447280054 21.86957829639579 22.49228718938885 24.37082004141482 37 30.15280459480636 22.02724493507947 21.447909670920083 26.372040799194092 38 33.44788868368032 21.370781564808595 20.965552943810163 24.215776807700916 39 31.052545052608018 21.28718239310499 21.618605887620326 26.041666666666668 40 30.95836481419297 21.038658495634653 21.476067550929034 26.526909139243337 41 28.274184295948064 20.783401192075218 24.067466980076112 26.874947531900606 42 27.76952862659503 20.43238960711887 22.8894707018133 28.9086110644728 43 27.076162693082605 18.650485504813076 25.753879141481978 28.51947266062234 44 27.39726746138348 19.60820321244683 24.909492528542646 28.085036797627044 45 28.27811940340273 17.95344680434296 26.221369907096488 27.547063885157826 46 29.20147050593239 19.241626091336467 24.353855355943583 27.203048046787554 47 27.305972968435192 20.535926656592792 25.33544604880233 26.822654326169687 48 29.574081458473252 19.68279536042086 24.57535818222521 26.16776499888068 49 28.21603215245131 21.75598486120439 24.241748516901723 25.786234469442583 50 25.674477417730017 22.006694929482876 23.794982650548466 28.52384500223864 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 1.0 10 2.0 11 41.5 12 81.0 13 47.5 14 14.0 15 148.5 16 283.0 17 415.0 18 547.0 19 741.0 20 935.0 21 1218.5 22 1502.0 23 1487.0 24 1472.0 25 1749.5 26 2027.0 27 2084.0 28 2141.0 29 2434.0 30 2727.0 31 3629.0 32 4531.0 33 5215.5 34 5900.0 35 6523.5 36 7147.0 37 7740.5 38 8334.0 39 8946.0 40 9558.0 41 11418.0 42 13278.0 43 14687.0 44 16096.0 45 19807.5 46 23519.0 47 23103.5 48 22688.0 49 25683.5 50 28679.0 51 30653.5 52 32628.0 53 37041.0 54 41454.0 55 45105.5 56 48757.0 57 55825.0 58 62893.0 59 67756.0 60 72619.0 61 85813.5 62 99008.0 63 106909.5 64 114811.0 65 113437.0 66 112063.0 67 110747.0 68 109431.0 69 102562.0 70 95693.0 71 79107.0 72 62521.0 73 54546.0 74 46571.0 75 40062.5 76 33554.0 77 28106.5 78 22659.0 79 22567.0 80 22475.0 81 15339.5 82 8204.0 83 5922.5 84 3641.0 85 3072.5 86 2504.0 87 1422.5 88 341.0 89 232.0 90 123.0 91 110.5 92 98.0 93 63.0 94 28.0 95 18.5 96 9.0 97 7.5 98 6.0 99 3.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1143552.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.041223165790765 #Duplication Level Percentage of deduplicated Percentage of total 1 70.64099992073238 7.093220448586816 2 11.34341282644941 2.278034793041438 3 4.537089881167763 1.3667379606016983 4 2.2422615297754582 0.9006019366617108 5 1.31846189570815 0.6619485065198542 6 0.7707194199453804 0.4643379416328225 7 0.5678896843094766 0.3991614937591345 8 0.35360743290672525 0.28405209175190504 9 0.2821803788049616 0.2550092540929195 >10 2.9893481516282274 7.743426219355171 >50 2.300651716659746 16.906315288229102 >100 2.490241643482991 44.443682184418705 >500 0.11375395609394681 7.440868385818904 >1k 0.048499748722225386 9.27799740669081 >5k 8.818136131313706E-4 0.48460608883901785 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCCCTCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 5473 0.4785965133199015 No Hit GCCCTCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 4617 0.4037420248488919 No Hit GCCCTCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 3986 0.3485630736512201 No Hit GCCCTCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 3660 0.32005540631296175 No Hit GCCCTCGGGATCAGTGGTAGCTTAACAACCTCTGGATTGATTGTGTATAA 3633 0.31769434184016115 No Hit GCCCTCGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 3443 0.3010794436982315 No Hit GCCCTCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 3422 0.2992430602193866 No Hit GCCCTCCACCATATCACACATTCGAGGAACCAACCTATGTAAAAGTAAAA 3160 0.27633199014998877 No Hit GCCCTCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 3078 0.26916134989926127 No Hit GCCCTCGGGGCTCTTTCGAGTCTTGGCTCCAAGATGACCAAAAAAAGAAG 2965 0.2592798578464294 No Hit GCCCTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 2797 0.24458879001567047 No Hit GCCCTCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 2779 0.24301474703380344 No Hit GCCCTCGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGT 2669 0.2333955954779494 No Hit GCCCTCGGGCTCTTTCCCACAACTGTGCTGTGTCCTTGTTGCTCTGCTTC 2591 0.22657474255652565 No Hit GCCCTCGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 2282 0.19955367136780836 No Hit GCCCTCGGGGACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCATCCTTG 2176 0.1902843071412581 No Hit GCCCTCGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 2150 0.18801068950078353 No Hit GCCCTCGGAGCTGCCCTCGGGGGAGTGTGTGTGACTAACCCTTACTATTT 2095 0.1832011137228565 No Hit GCCCTCGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTT 2090 0.18276387956122678 No Hit GCCCTCGGGGCTCTTTCTTGACTCCATCTTCGCGGTAGCAGCAGCGGCGT 2041 0.17847898477725543 No Hit GCCCTCGGGGTTGCACTGCGCTATTTCCCGCGCGGGCTAACCTCGTTCCC 1913 0.16728579023953435 No Hit GCCCTCGGGGAGACCGCACTCGGACCTGCTCCGCTCCTGCACCGCGGCCA 1858 0.16247621446160734 No Hit GCCCTCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 1822 0.15932812849787328 No Hit GCCCTCGGGGTCCTAAATATCCAAAGACTGTACTGGCCAGTGTCCTTTAC 1785 0.1560925957018133 No Hit GCCCTCGGGGCTCTTTTTCGTGACGCCTCCCAGGCGCTCGGCTGTGTCAA 1769 0.15469344638459817 No Hit GCCCTCGGGGAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCGAT 1746 0.15268216924110142 No Hit GCCCTCGGGCTCGCTACGTCCAACGCGCCATCAGCTGGAGGCGAGTAGAT 1721 0.15049599843295275 No Hit GCCCTCGGGATGTTGATAATGCTCGGGATATTTTTCAATGTCCATTCTGC 1632 0.14271323035594358 No Hit GCCCTCGGGATCTGTCGTAGAAACCTCGACATTGAGCGCCCAACCTACAC 1620 0.14166386836803224 No Hit GCCCTCGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCG 1606 0.140439612715469 No Hit GCCCTCGGGAGCCTCGCTTGTCAAGGAAAGTATACCCCAAGTGGCCAGTC 1603 0.14017727221849116 No Hit GCCCTCGGGGAGCGCCCAACCTACACTAACCTAAACAGGTTGATAGGTCA 1579 0.13807854824266846 No Hit GCCCTCGGGGGATATTTATGGCCTGAATACTGCTCTCCTACAGAGAATTC 1415 0.12373726774121334 No Hit GCCCTCGGGGCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 1384 0.12102641593910901 No Hit GCCCTCGGGGGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 1354 0.11840301096933065 No Hit GCCCTCGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 1350 0.11805322364002686 No Hit GCCCTCGGGGAGTCCATAGCTTGCAGCAGCCAGGTTCCATCCTTGCAAAC 1343 0.11744109581374525 No Hit GCCCTCGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCC 1274 0.11140726438325498 No Hit GCCCTCGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCG 1265 0.11062024289232146 No Hit GCCCTCCCCTTTCCTTTGATCTTGACCACTCATGGAAGCAGGACCAGTAA 1244 0.10878385941347661 No Hit GCCCTCGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTT 1240 0.10843407208417281 No Hit GCCCTCGGGGATCGTGGTGTGCCCAGCTCTTCCAAGGACTGCTGCGCTTC 1237 0.108171731587195 No Hit GCCCTCGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 1232 0.10773449742556525 No Hit GCCCTCGGGGCTTTTCCTCAGCTGCCGCCAAGGTGCTCGGTCCTTCCGAG 1211 0.10589811394672038 No Hit GCCCTCGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAA 1161 0.1015257723304231 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 1.7489366465189165E-4 0.0 0.0 0.0 0.0 8 3.497873293037833E-4 0.0 0.0 0.0 0.0 9 5.24680993955675E-4 0.0 0.0 0.0 0.0 10 0.0034104264607118873 0.0 0.0 0.0 0.0 11 0.008482342735616745 0.0 0.0 0.0 0.0 12 0.011630428699350794 0.0 0.0 0.0 0.0 13 0.01591532348332214 0.0 0.0 0.0 0.0 14 0.02929468882919185 0.0 0.0 0.0 0.0 15 0.040138096037609136 0.0 0.0 0.0 0.0 16 0.05001958809044101 0.0 0.0 0.0 0.0 17 0.058064696664428025 0.0 0.0 0.0 0.0 18 0.06331150660398478 0.0 0.0 0.0 0.0 19 0.07135661517797179 0.0 0.0 0.0 0.0 20 0.0765159782852026 0.0 0.0 0.0 0.0 21 0.08062597940452206 0.0 0.0 0.0 0.0 22 0.08543555518244907 0.0 0.0 0.0 0.0 23 0.09269364226550257 0.0 0.0 0.0 0.0 24 0.10126343183344527 0.0 0.0 0.0 0.0 25 0.10563577344974255 0.0 0.0 0.0 0.0 26 0.11271896686814417 0.0 0.0 0.0 0.0 27 0.12190088426236848 0.0 0.0 0.0 0.0 28 0.172707493843743 0.0 0.0 0.0 0.0 29 0.17891621893888515 0.0 0.0 0.0 0.0 30 0.19212069062010298 0.0 0.0 0.0 0.0 31 0.20016579919409 0.0 0.0 0.0 0.0 32 0.20908537609133646 0.0 0.0 0.0 0.0 33 0.21398239870158944 0.0 0.0 0.0 0.0 34 0.21957899597044997 0.0 0.0 0.0 0.0 35 0.25315857958361315 0.0 0.0 0.0 0.0 36 0.26216560331318556 0.0 0.0 0.0 0.0 37 0.2707353928811283 0.0 0.0 0.0 0.0 38 0.2780809267965077 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTTG 20 7.8564644E-4 44.000004 11 CTAGACG 20 7.8564644E-4 44.000004 42 CGGGTAT 40 8.312782E-9 44.000004 6 CTATGCG 20 7.8564644E-4 44.000004 30 TGATACG 40 8.312782E-9 44.000004 14 GATACGG 40 8.312782E-9 44.000004 15 ATCTACG 40 8.312782E-9 44.000004 26 ACGCATT 20 7.8564644E-4 44.000004 13 GCGAATA 20 7.8564644E-4 44.000004 38 CTATACA 20 7.8564644E-4 44.000004 38 ATTACCT 20 7.8564644E-4 44.000004 20 ATTCGAT 20 7.8564644E-4 44.000004 28 TACGGTG 40 8.312782E-9 44.000004 29 CAATTAA 20 7.8564644E-4 44.000004 36 TTATAGC 40 8.312782E-9 44.000004 36 CGTTAAC 65 0.0 44.000004 12 GTTACGA 20 7.8564644E-4 44.000004 44 CCGTAAA 20 7.8564644E-4 44.000004 30 GCCGAAT 20 7.8564644E-4 44.000004 43 TCTACGA 20 7.8564644E-4 44.000004 25 >>END_MODULE