##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527048_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 694812 Sequences flagged as poor quality 0 Sequence length 50 %GC 60 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.36855293230399 33.0 31.0 34.0 31.0 34.0 2 32.95906950369309 34.0 31.0 34.0 31.0 34.0 3 32.959004737972286 34.0 31.0 34.0 31.0 34.0 4 36.27808673425329 37.0 37.0 37.0 35.0 37.0 5 36.28791817067063 37.0 37.0 37.0 35.0 37.0 6 36.32174026931026 37.0 37.0 37.0 35.0 37.0 7 36.61165466341974 37.0 37.0 37.0 35.0 37.0 8 36.655056331784714 37.0 37.0 37.0 35.0 37.0 9 38.60204199121489 39.0 39.0 39.0 38.0 39.0 10 35.76833301670092 35.0 35.0 39.0 33.0 39.0 11 35.03378611768363 35.0 35.0 39.0 31.0 39.0 12 34.78680276103464 35.0 34.0 39.0 28.0 39.0 13 34.98269172092595 35.0 34.0 39.0 30.0 39.0 14 35.644444828241305 35.0 35.0 40.0 31.0 40.0 15 35.776290564929795 35.0 35.0 40.0 32.0 40.0 16 35.71518050926006 35.0 35.0 40.0 32.0 40.0 17 35.756262125582175 35.0 35.0 40.0 32.0 40.0 18 35.73587531591279 35.0 35.0 40.0 32.0 40.0 19 35.627161016217336 35.0 35.0 40.0 32.0 40.0 20 35.29031882005492 35.0 34.0 40.0 31.0 40.0 21 35.422163117505164 35.0 35.0 40.0 31.0 40.0 22 35.156047966932064 35.0 34.0 39.0 31.0 40.0 23 35.00613547261705 35.0 34.0 39.0 31.0 40.0 24 35.029101397212486 35.0 34.0 39.0 31.0 40.0 25 34.906672596328214 35.0 34.0 39.0 31.0 40.0 26 34.69254129174511 35.0 34.0 38.0 30.0 40.0 27 34.50732716187976 35.0 34.0 38.0 30.0 40.0 28 34.238641531810046 35.0 34.0 37.0 29.0 40.0 29 34.398519311698706 35.0 34.0 37.0 30.0 40.0 30 34.42790855655918 35.0 34.0 37.0 30.0 39.0 31 34.293938504228485 35.0 34.0 36.0 30.0 39.0 32 33.62217405571579 35.0 34.0 36.0 28.0 39.0 33 33.68230830785882 35.0 33.0 36.0 28.0 39.0 34 33.66753020961066 35.0 33.0 35.0 29.0 39.0 35 33.63298849185103 35.0 34.0 35.0 29.0 37.0 36 33.485629206173755 35.0 33.0 35.0 29.0 37.0 37 33.432362998911934 35.0 33.0 35.0 29.0 37.0 38 33.236312844337746 35.0 33.0 35.0 27.0 37.0 39 33.22722837256697 35.0 33.0 35.0 27.0 37.0 40 33.07835356902299 35.0 33.0 35.0 27.0 37.0 41 32.95638964209024 35.0 33.0 35.0 27.0 36.0 42 32.897634180181115 35.0 33.0 35.0 27.0 36.0 43 32.9005673477142 35.0 33.0 35.0 27.0 36.0 44 32.788010281917984 35.0 33.0 35.0 27.0 36.0 45 32.7938492714576 35.0 33.0 35.0 27.0 36.0 46 32.573378122427364 35.0 33.0 35.0 25.0 36.0 47 32.53564561348969 35.0 33.0 35.0 24.0 35.0 48 32.458149830457735 35.0 33.0 35.0 24.0 35.0 49 32.29246184579426 35.0 33.0 35.0 24.0 35.0 50 31.859501563012728 35.0 32.0 35.0 23.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 3.0 14 11.0 15 32.0 16 113.0 17 218.0 18 430.0 19 731.0 20 1040.0 21 1765.0 22 2484.0 23 3478.0 24 4539.0 25 5916.0 26 7330.0 27 9134.0 28 11689.0 29 14721.0 30 19716.0 31 25425.0 32 35291.0 33 59031.0 34 153515.0 35 126516.0 36 95387.0 37 84392.0 38 26848.0 39 5056.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 100.0 0.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 98.64567681617473 1.1582989355393976 0.09139162823900567 0.10463262004686158 8 98.66424298947052 1.0136554924209715 0.22005952689360575 0.1020419912148898 9 93.16405013154638 4.67651681318112 1.3104264175057425 0.8490066377667628 10 55.799410488016896 30.14599632706401 5.487815409060293 8.566777775858792 11 34.271716665803126 22.16657167694283 21.578355008261227 21.98335664899282 12 26.361807222673185 16.252022129727177 29.296413994001252 28.089756653598386 13 24.80498321848212 15.279097079497763 30.58539576173123 29.330523940288884 14 24.16812029728905 17.09383257629402 32.42215160359925 26.315895522817684 15 25.799065070839305 17.936506565804848 28.605435714984772 27.658992648371072 16 27.993615539167426 17.383695157826864 24.655158517699753 29.96753078530595 17 28.58658169404098 19.2555684127505 22.933397811206486 29.22445208200204 18 28.738853099831317 17.719613363039212 24.10911152944969 29.432422007679776 19 29.616788426221767 17.598861274704525 21.714363021939747 31.069987277133958 20 29.654064696637363 18.502127194118696 24.777781615746417 27.066026493497517 21 32.93509611232967 16.138178384944414 24.267139888199974 26.659585614525945 22 32.60766941273323 16.777056239673467 22.51314024513106 28.10213410246225 23 28.117246103982087 19.567595263179104 25.055554596063395 27.259604036775414 24 28.832979280726295 20.14818396918879 23.598181954255253 27.420654795829662 25 27.098697201545168 19.827521689320278 23.989079060235 29.08470204889956 26 28.96682843704484 20.05794373154177 23.826589062940766 27.148638768472622 27 31.633592971911828 17.316914503491592 22.785444120136095 28.264048404460485 28 29.968250404425945 19.843929005256097 21.71637795547573 28.47144263484223 29 29.8345451719314 18.480106849046937 21.912977899057587 29.772370079964077 30 28.70718985855167 18.854164867618866 22.759681755640372 29.678963518189093 31 31.494706481753337 19.530750764235506 22.286460222333524 26.688082531677633 32 33.409756883876504 19.19857457844712 21.498621209766096 25.893047327910285 33 30.906633736895735 20.245332550387733 22.422612159836042 26.42542155288049 34 29.803745473595733 21.40550249563911 24.663937870963657 24.126814159801498 35 32.23274785121731 21.96608579011301 21.63318998520463 24.167976373465052 36 33.22510261768651 21.383338226743348 19.34206663097356 26.04949252459658 37 30.501344248516144 21.844182311186337 20.82534556110142 26.829127879196097 38 31.871642976805237 20.76115553559812 22.259402543421817 25.107798944174824 39 30.682976114402173 20.847653753821177 21.721271365491674 26.748098766284983 40 29.512587577646904 21.898297669009747 22.61201591221798 25.97709884112537 41 28.165460585021563 20.614209311295717 22.64238383908165 28.577946264601074 42 28.766198626391027 19.979217399814626 24.91983443003287 26.334749543761475 43 30.817688813664702 18.469456486071053 24.619897180820136 26.09295751944411 44 26.825098012124144 18.563870514614024 25.703499651704348 28.907531821557487 45 28.060108345854708 18.729095064564227 25.91809007328601 27.292706516295056 46 30.79509277329695 20.21395715675607 22.67390315653731 26.31704691340967 47 28.252678422364614 20.196542374052264 25.359665636172085 26.19111356741104 48 28.41847866761081 20.895868234860654 24.518574808725237 26.167078288803303 49 27.387408392486023 21.32188275389602 25.021588573599768 26.269120280018193 50 27.784494222897706 21.79783883985884 22.552575372906627 27.86509156433683 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 1.0 12 2.0 13 30.0 14 58.0 15 160.5 16 263.0 17 607.5 18 952.0 19 698.0 20 444.0 21 671.5 22 899.0 23 1100.5 24 1302.0 25 1119.5 26 937.0 27 1287.0 28 1637.0 29 2533.0 30 3429.0 31 3155.0 32 2881.0 33 3170.5 34 3460.0 35 3790.0 36 4120.0 37 5344.5 38 6569.0 39 11135.0 40 15701.0 41 13168.0 42 10635.0 43 10243.0 44 9851.0 45 13248.5 46 16646.0 47 16604.0 48 16562.0 49 18614.0 50 20666.0 51 21994.5 52 23323.0 53 26548.0 54 29773.0 55 34454.0 56 39135.0 57 41356.5 58 43578.0 59 50590.0 60 57602.0 61 63305.5 62 69009.0 63 70694.0 64 72379.0 65 64701.0 66 57023.0 67 55288.0 68 53553.0 69 47545.5 70 41538.0 71 34544.5 72 27551.0 73 24894.5 74 22238.0 75 18246.0 76 14254.0 77 16296.0 78 18338.0 79 12139.5 80 5941.0 81 3731.5 82 1522.0 83 1126.5 84 731.0 85 466.5 86 202.0 87 141.5 88 81.0 89 51.5 90 22.0 91 13.0 92 4.0 93 2.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 694812.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.712825915499446 #Duplication Level Percentage of deduplicated Percentage of total 1 71.2805975763764 7.636166329884919 2 11.205900529327996 2.4009372319418776 3 4.180885079399199 1.3436728208493809 4 2.1522422548835207 0.9222638641819658 5 1.150012091248623 0.615993966713298 6 0.7308488056533305 0.46976736153088894 7 0.5252975790633313 0.39391950628371414 8 0.3251202407501948 0.27863652326096844 9 0.22435983555901873 0.21631750746964645 >10 3.154472418518419 9.196300582027945 >50 2.5794663728941076 20.175961267220487 >100 2.3671977859580298 44.18763636782324 >500 0.10210387726039176 7.316511516784397 >1k 0.020152081038235216 3.9308474810452325 >5k 0.001343472069215681 0.9150676729820441 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAGCGGGGGAGTGTGCATCTTAATTTTATTTTCTCCATTTCAGTTGCTTG 6358 0.9150676729820441 No Hit AAGCGGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 3582 0.5155351375623909 No Hit AAGCGGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 2972 0.4277416049233462 No Hit AAGCGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 2934 0.42227249961140567 No Hit AAGCGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGA 2326 0.33476681462035773 No Hit AAGCGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 2107 0.3032474971647007 No Hit AAGCGGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 1804 0.2596385784931751 No Hit AAGCGGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAA 1774 0.2553208637732221 No Hit AAGCGGGGGGACGCAGAGCCCTTGTACCCTTTATCTGGCTTTCCCCAGTG 1438 0.20696245890974826 No Hit AAGCGGGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 1424 0.20494752537377017 No Hit AAGCGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 1333 0.19185045738991266 No Hit AAGCGGGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 1214 0.174723522334099 No Hit AAGCGGGGGACCCGGTTCCTTCTTTGCTTACAAAGGCTTGCTCCTTCCTC 1129 0.1624899972942321 No Hit AAGCGGGGGGTCTGTCGAGTCGCGTCCACCCGCGAGCACAGCTTCTTTGC 1110 0.15975544463826186 No Hit AAGCGGGGGGAGGGTCTGTGGCTAGGTGCAGACTGGGTGCAGAACATCAC 1098 0.15802835875028065 No Hit AAGCGGGGGGGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTCCTG 1067 0.1535667202063292 No Hit AAGCGGGGGGCTTTTCAGCCAAGATGGCGCCGAAAGCGAAGAAGGAAGCT 986 0.14190889046245603 No Hit AAGCGGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 970 0.1396061092784811 No Hit AAGCGGGGGGAGTTATTAAACAAACAAACAGAAAAAAATTGTTTTGAAAA 959 0.13802294721449831 No Hit AAGCGGGGGAGTGATTTCACAGACACTGCCATGCAGAAACATAAGAAACA 937 0.13485662308653276 No Hit AAGCGGGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCG 933 0.13428092779053902 No Hit AAGCGGGGAGAGGAGCCCGAGGTCCGGGCCTTTGACCCAGACACAGCAGC 930 0.13384915631854372 No Hit AAGCGGGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCT 908 0.13068283219057816 No Hit AAGCGGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCC 897 0.1290996701265954 No Hit AAGCGGGGGATCGTGTTGAGTGTAAGCTGTTGTAGTGATGTTAGCTATGT 888 0.1278043557106095 No Hit AAGCGGGGGGAGCTCTCTTGAGTCACCCCCGCGCAGCCTAGGCTTGCCGT 876 0.1260772698226283 No Hit AAGCGGGGGAGACTCCTCTCTCGCTCTCTCCGCGGCTACAGCTGGACCCT 859 0.12363056481465491 No Hit AAGCGGGGGATCTGCCGCCGTAACCTAGATATTGAGCGTCCAACCTATAC 852 0.12262309804666587 No Hit AAGCGGGGGCAGTATTTTTTCCTGAAAGACTCTAGAGTCTGTGGGGAAAG 842 0.12118385980668153 No Hit AAGCGGGGGGAGTTGCTTCAGTGTCCTGGTGCGGAGCGTCACGTCTCGTG 805 0.11585867831873946 No Hit AAGCGGGGGAGATGAGTATCTTGTGCGTGTTTAGGGGGTCCTGCCGTTAC 800 0.11513905919874728 No Hit AAGCGGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTT 798 0.11485121155075041 No Hit AAGCGGGGGATCGCTTTCTTCCTTCTCTGAAGTGTTAACACTTATGGAAG 798 0.11485121155075041 No Hit AAGCGGGGGAGTTGCTTCAGTGTCCTGGTGCGGAGCGTCACGTCTCGTGC 790 0.11369982095876295 No Hit AAGCGGGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAAC 788 0.11341197331076608 No Hit AAGCGGGGGGAGACTCCTCTCTCGCTCTCTCCGCGGCTACAGCTGGACCC 763 0.10981387771080522 No Hit AAGCGGGGGGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTCCTGG 720 0.10362515327887256 No Hit AAGCGGGGGGCTCTTCCTGTCTGTATCAGGGCGGCGCGTGGTCCACGCCG 714 0.10276161033488196 No Hit AAGCGGGGGATAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGAGGCT 703 0.10117844827089918 No Hit AAGCGGGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCT 695 0.10002705767891171 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 5.756952959937364E-4 0.0 0.0 0.0 0.0 8 8.635429439906047E-4 0.0 0.0 0.0 0.0 9 0.001295314415985907 0.0 0.0 0.0 0.0 10 0.005037333839945194 0.0 0.0 0.0 0.0 11 0.011226058271877861 0.0 0.0 0.0 0.0 12 0.01367276327985124 0.0 0.0 0.0 0.0 13 0.019573640063787038 0.0 0.0 0.0 0.0 14 0.02547451684772284 0.0 0.0 0.0 0.0 15 0.03223893657564924 0.0 0.0 0.0 0.0 16 0.03885943247957721 0.0 0.0 0.0 0.0 17 0.043033223375531796 0.0 0.0 0.0 0.0 18 0.047350938095484824 0.0 0.0 0.0 0.0 19 0.05138080516744098 0.0 0.0 0.0 0.0 20 0.054403205471408096 0.0 0.0 0.0 0.0 21 0.058289148719365816 0.0 0.0 0.0 0.0 22 0.0628947110873157 0.0 0.0 0.0 0.0 23 0.06548533991928752 0.0 0.0 0.0 0.0 24 0.07037874993523428 0.0 0.0 0.0 0.0 25 0.07354507406319984 0.0 0.0 0.0 0.0 26 0.07685532201516382 0.0 0.0 0.0 0.0 27 0.0810291129111184 0.0 0.0 0.0 0.0 28 0.08534682763107143 0.0 0.0 0.0 0.0 29 0.09124770441500722 0.0 0.0 0.0 0.0 30 0.09657288590294928 0.0 0.0 0.0 0.0 31 0.10204199121488979 0.0 0.0 0.0 0.0 32 0.10664755358283967 0.0 0.0 0.0 0.0 33 0.11110919212679113 0.0 0.0 0.0 0.0 34 0.11816145950271441 0.0 0.0 0.0 0.0 35 0.1273725842386142 0.0 0.0 0.0 0.0 36 0.13068283219057816 0.0 0.0 0.0 0.0 37 0.13572016603052336 0.0 0.0 0.0 0.0 38 0.14147711899046073 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTTT 20 7.8543293E-4 44.0 16 GTCATAT 20 7.8543293E-4 44.0 24 AACGTCC 20 7.8543293E-4 44.0 14 AACCGTT 30 2.5262652E-6 44.0 43 CGGGTAT 20 7.8543293E-4 44.0 37 TAATAAC 25 4.4410175E-5 44.0 20 TGATACG 30 2.5262652E-6 44.0 37 GATACCC 20 7.8543293E-4 44.0 14 CTCACGA 45 4.783942E-10 44.0 15 TCGTTAT 20 7.8543293E-4 44.0 39 AAATCGC 20 7.8543293E-4 44.0 36 CAAACGT 20 7.8543293E-4 44.0 25 GCCCAAT 20 7.8543293E-4 44.0 16 CTCGTTA 20 7.8543293E-4 44.0 16 CGTATTG 55 1.8189894E-12 44.0 12 CATATGC 20 7.8543293E-4 44.0 23 ATCTATT 20 7.8543293E-4 44.0 10 GATGTAG 20 7.8543293E-4 44.0 14 CGTATGA 25 4.4410175E-5 44.0 20 AGTTTCG 20 7.8543293E-4 44.0 13 >>END_MODULE