##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527045_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1611423 Sequences flagged as poor quality 0 Sequence length 50 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.33659194389059 33.0 31.0 34.0 31.0 34.0 2 32.83734376386585 34.0 31.0 34.0 31.0 34.0 3 33.25306825085654 34.0 34.0 34.0 31.0 34.0 4 36.17614369411383 37.0 35.0 37.0 35.0 37.0 5 36.29545687259025 37.0 37.0 37.0 35.0 37.0 6 36.36324850768544 37.0 37.0 37.0 35.0 37.0 7 36.66720159759418 37.0 37.0 37.0 35.0 37.0 8 36.700938859629034 37.0 37.0 37.0 35.0 37.0 9 38.56667243796321 39.0 39.0 39.0 38.0 39.0 10 36.589245033737264 37.0 35.0 39.0 34.0 39.0 11 36.00339327414341 39.0 35.0 39.0 31.0 39.0 12 36.10088040198011 39.0 35.0 39.0 32.0 39.0 13 36.260700635401136 38.0 35.0 39.0 33.0 39.0 14 37.01120562384923 39.0 35.0 40.0 33.0 40.0 15 37.09439420934168 39.0 35.0 40.0 33.0 40.0 16 37.02514175359294 39.0 35.0 40.0 33.0 40.0 17 37.10896456113634 39.0 35.0 40.0 33.0 40.0 18 37.13486837410165 39.0 35.0 40.0 33.0 40.0 19 37.115003323149786 39.0 35.0 40.0 33.0 40.0 20 36.881805087801276 39.0 35.0 40.0 33.0 40.0 21 37.021316563062584 39.0 35.0 40.0 33.0 40.0 22 36.91402257507805 39.0 35.0 40.0 33.0 40.0 23 37.020511684393234 39.0 35.0 40.0 33.0 40.0 24 37.05591579616277 39.0 35.0 40.0 33.0 40.0 25 37.018903168193575 39.0 35.0 40.0 33.0 40.0 26 36.95906661379414 39.0 35.0 40.0 33.0 40.0 27 36.85573310049565 38.0 35.0 40.0 33.0 40.0 28 36.746910029210206 38.0 35.0 40.0 33.0 40.0 29 36.84055583170899 39.0 35.0 40.0 33.0 40.0 30 36.83748463314723 39.0 35.0 40.0 33.0 40.0 31 36.81501939590039 39.0 35.0 40.0 33.0 40.0 32 36.06006120056621 38.0 35.0 40.0 32.0 40.0 33 36.320046319309085 38.0 35.0 40.0 32.0 40.0 34 36.36845074198395 38.0 35.0 40.0 33.0 40.0 35 36.41770472433371 38.0 35.0 40.0 33.0 40.0 36 36.28196320891535 38.0 35.0 40.0 33.0 40.0 37 36.27659962654126 38.0 35.0 40.0 33.0 40.0 38 36.12406053531568 37.0 35.0 40.0 32.0 40.0 39 36.1213300294212 37.0 35.0 40.0 32.0 40.0 40 36.140586922242015 37.0 35.0 40.0 33.0 40.0 41 36.02547996398214 37.0 35.0 40.0 32.0 40.0 42 35.971446355178 37.0 35.0 40.0 32.0 40.0 43 35.94589068171424 37.0 35.0 40.0 32.0 40.0 44 35.80806467327325 36.0 35.0 40.0 32.0 40.0 45 35.75108211810307 36.0 35.0 40.0 32.0 40.0 46 35.52115242242416 36.0 35.0 40.0 31.0 40.0 47 35.47370677965996 36.0 35.0 40.0 31.0 40.0 48 35.45014251379061 36.0 35.0 40.0 31.0 40.0 49 35.232498232928286 35.0 35.0 40.0 30.0 40.0 50 34.887864328608934 35.0 34.0 40.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 1.0 14 17.0 15 39.0 16 106.0 17 225.0 18 436.0 19 752.0 20 1133.0 21 1832.0 22 2628.0 23 3746.0 24 5151.0 25 7197.0 26 9544.0 27 12760.0 28 16297.0 29 20464.0 30 25343.0 31 33275.0 32 45499.0 33 75693.0 34 210672.0 35 192194.0 36 122343.0 37 159738.0 38 382417.0 39 281920.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 100.0 0.0 4 0.0 100.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 99.26003290259602 0.5876793368345866 0.1354703265374765 0.016817434031908444 8 98.8185597450204 0.9160226706457584 0.17742082618902671 0.08799675814481982 9 91.69789682783478 4.125856463510822 2.80398132582196 1.3722653828324407 10 33.2841842272327 53.42526450224428 5.9770153460636966 7.313535924459313 11 27.541806217237806 23.05341303928267 35.164199592534054 14.24058115094547 12 28.082508441296916 18.187589478367876 29.859633379938106 23.8702687003971 13 23.916004674129635 20.349405463369955 31.87654638167632 23.858043480824094 14 23.02989345441886 23.73951470222282 29.953711719393354 23.27688012396497 15 22.068445094801305 27.648171833218214 29.850573064924603 20.432810007055878 16 26.186978837958748 30.06994439076518 26.410632093497487 17.332444677778586 17 25.692633157153644 29.198540668713306 25.672278476849343 19.436547697283704 18 23.153014447479027 29.020002817385627 26.63850522178224 21.188477513353103 19 22.172514603552266 29.84356062933196 27.44865873206476 20.53526603505101 20 22.82212677862982 30.286212868998398 26.883257841051044 20.00840251132074 21 21.56187419442319 29.537557798293808 31.145639599285847 17.754928407997156 22 21.553372391979014 28.35500051817555 30.557401749881937 19.5342253399635 23 19.379331187403928 32.46025407357348 30.630939238176445 17.529475500846146 24 21.125799991684367 32.859962902354006 27.556389600992414 18.45784750496921 25 20.522854644621553 35.66400628512811 25.68028382367634 18.13285524657399 26 20.81433614885725 36.03336926430863 24.783064409531203 18.369230177302917 27 19.552656254751234 32.707488970928175 27.067877273689156 20.67197750063143 28 20.219644376430026 33.60979705514939 25.606311936716804 20.56424663170378 29 21.16135862526475 33.02230388917125 25.590301243062807 20.226036242501195 30 20.582615489539368 31.829569268900844 27.59033475381697 19.997480487742823 31 21.12642056120584 33.33246453600327 25.812589245654305 19.72852565713658 32 22.050200350870007 33.341711021873216 25.96090536128627 18.64718326597051 33 21.877930251709206 33.540045040935865 26.234204178542814 18.34782052881211 34 20.631268140022822 32.76582250594661 28.0546448697828 18.548264484247774 35 19.871939273548907 35.594316327866736 26.15613653274156 18.377607865842798 36 20.31316420331595 35.05348998990333 25.781002257011348 18.852343549769365 37 20.858520698786105 35.26113255178808 24.95527245173986 18.92507429768596 38 22.051317376008658 35.05051125620027 24.147787390399667 18.75038397739141 39 20.295664142810423 34.819659394212444 25.039794020564432 19.8448824424127 40 20.30546914124969 36.08040843403625 24.354809382762937 19.25931304195112 41 18.79078305323928 36.77135053924388 25.238438324387825 19.19942808312901 42 19.876779715816394 35.19529012555983 25.26189585229949 19.66603430632429 43 19.27178648933272 35.5667009841612 25.83859110860401 19.322921417902066 44 20.432375608390846 35.2686414429979 25.084412969158315 19.214569979452943 45 20.255947693436173 35.63297780905448 23.969125425167693 20.14194907234165 46 19.358542108434595 37.156972439886985 24.295420879558005 19.18906457212042 47 18.78302593422087 36.06805910055895 26.560437575980984 18.5884773892392 48 19.474898893710716 36.730703235587434 25.060893384294502 18.733504486407355 49 19.88813613805934 35.81449439408523 24.509020908848886 19.788348559006543 50 19.070908135232028 36.59666021894934 24.543586631194913 19.78884501462372 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 1.0 4 2.0 5 135.0 6 268.0 7 854.0 8 1440.0 9 3946.0 10 6452.0 11 15655.0 12 24858.0 13 31492.0 14 38126.0 15 33127.0 16 28128.0 17 27754.0 18 27380.0 19 26036.5 20 24693.0 21 24183.5 22 23674.0 23 24579.0 24 25484.0 25 27634.5 26 29785.0 27 30159.0 28 30533.0 29 35380.0 30 40227.0 31 50648.5 32 61070.0 33 63635.0 34 66200.0 35 65055.0 36 63910.0 37 68248.5 38 72587.0 39 77232.0 40 81877.0 41 78216.0 42 74555.0 43 79567.0 44 84579.0 45 86772.5 46 88966.0 47 89387.5 48 89809.0 49 90008.5 50 90208.0 51 85237.5 52 80267.0 53 86085.0 54 91903.0 55 88441.5 56 84980.0 57 82045.5 58 79111.0 59 71113.5 60 63116.0 61 57351.5 62 51587.0 63 43222.0 64 34857.0 65 28253.0 66 21649.0 67 17547.0 68 13445.0 69 9855.0 70 6265.0 71 4922.0 72 3579.0 73 3390.5 74 3202.0 75 2118.0 76 1034.0 77 1029.5 78 1025.0 79 675.0 80 325.0 81 231.0 82 137.0 83 116.5 84 96.0 85 63.0 86 30.0 87 17.0 88 4.0 89 2.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1611423.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.038419877502085 #Duplication Level Percentage of deduplicated Percentage of total 1 69.7136306663072 5.603874344808826 2 9.972918692943232 1.6033301571613399 3 4.119444931982146 0.9934148407656153 4 2.1150534718302514 0.6800675147976035 5 1.2146364949725903 0.4881879072563566 6 0.7249365622471101 0.3496406683137118 7 0.49062919456526777 0.27607184290534004 8 0.36553712012687345 0.23506726819141813 9 0.28216275001574925 0.20413283925755252 >10 4.165874591938243 9.40768841810535 >50 3.138232927503731 18.353052245283685 >100 3.5558623924410093 51.83732551320016 >500 0.10741333647139209 5.6492391908856066 >1k 0.0328652745919931 3.945117866403136 >5k 8.015920632193439E-4 0.3737893826643026 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TTTAGGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 5801 0.3599923794062763 No Hit TTTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 3484 0.21620642128106649 No Hit TTTAGGGGGAGCATTGCTTCTGTGTAAATTATGTACTGCAAAAATTTTTT 2572 0.15961048092276206 No Hit TTTAGGGGGCAGACTACCCAGATGCTTACACCACATGAAACACTGTCTCT 2115 0.13125045379146258 No Hit TTTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 2067 0.12827172008839394 No Hit TTTAGGGGATGGGCCAGGCCACGGAACACAGGAGACCTTCGAGTCAGCCC 2005 0.12442418905526359 No Hit TTTAGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 1957 0.12144545535219492 No Hit TTTAGGGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTAT 1938 0.12026637326139691 No Hit TTTAGGGGCAGTGAGCAGACTTTTCATTCCTCTGGTTCTGTGGTTGTCTC 1933 0.11995608850066058 No Hit TTTAGGGGGGTTGATTTCAGAAGAGACTAGCTTTGTGGAATATAGATGCT 1875 0.11635678527611931 No Hit TTTAGGGGGGTGTTTGTGTATTTATGCTTTGATTCATAGTAACTTCTCAT 1840 0.11418479195096508 No Hit TTTAGGGGGATCATTTCCATTGTATTTATTACAGAATGTTTTAGCCTTGA 1828 0.11344010852519792 No Hit TTTAGGGGGGTCGCCTGCCTCTGAAGTGGCATGGTCAGACGCGCCAGCAT 1798 0.11157839996078002 No Hit TTTAGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1759 0.10915817882703673 No Hit TTTAGGGGAGTGGCATGATGGTGACCTGTGCAGTCACTGAGCTGTAGGAG 1682 0.10437979351169743 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0011170251386507454 0.0 0.0 0.0 0.0 8 0.002482278085890545 0.0 0.0 0.0 0.0 9 0.004406043602455717 0.0 0.0 0.0 0.0 10 0.012969902998778099 0.0 0.0 0.0 0.0 11 0.017500060505528343 0.0 0.0 0.0 0.0 12 0.022774901438045753 0.0 0.0 0.0 0.0 13 0.028670311892035796 0.0 0.0 0.0 0.0 14 0.037358285192652704 0.0 0.0 0.0 0.0 15 0.04437072078529349 0.0 0.0 0.0 0.0 16 0.053431035798793984 0.0 0.0 0.0 0.0 17 0.059264389300636766 0.0 0.0 6.205695214726362E-5 0.0 18 0.06497362889818502 0.0 0.0 6.205695214726362E-5 0.0 19 0.07105521020861685 0.0 0.0 6.205695214726362E-5 0.0 20 0.077447076279785 0.0 0.0 6.205695214726362E-5 0.0 21 0.08272191721230242 0.0 0.0 6.205695214726362E-5 0.0 22 0.08855527071414519 0.0 0.0 6.205695214726362E-5 0.0 23 0.09445068116813525 0.0 0.0 3.723417128835818E-4 0.0 24 0.09991169295709444 0.0 0.0 3.723417128835818E-4 0.0 25 0.10711029940617703 0.0 0.0 3.723417128835818E-4 0.0 26 0.11468124756814319 0.0 0.0 3.723417128835818E-4 0.0 27 0.1220039679215203 0.0 0.0 3.723417128835818E-4 0.0 28 0.1322433650258188 0.0 0.0 3.723417128835818E-4 0.0 29 0.14223453432152824 0.0 0.0 3.723417128835818E-4 0.0 30 0.15433563999024466 0.0 0.0 3.723417128835818E-4 0.0 31 0.16575411918534116 0.0 0.0 3.723417128835818E-4 0.0 32 0.1764279149546705 0.0 0.0 3.723417128835818E-4 0.0 33 0.18927370404915408 0.0 0.0 3.723417128835818E-4 0.0 34 0.20143686667001776 0.0 0.0 3.723417128835818E-4 0.0 35 0.21726138946756995 0.0 0.0 3.723417128835818E-4 0.0 36 0.22824546999763562 0.0 0.0 3.723417128835818E-4 0.0 37 0.2397260061448794 0.0 0.0 3.723417128835818E-4 0.0 38 0.2499654032491779 0.0 0.0 3.723417128835818E-4 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTCG 20 7.857425E-4 44.000004 14 GTCGCAT 55 1.8189894E-12 44.000004 36 GTCGCAA 20 7.857425E-4 44.000004 40 CGAACGT 20 7.857425E-4 44.000004 38 CGAACCG 20 7.857425E-4 44.000004 31 GCGACTA 20 7.857425E-4 44.000004 21 GAATGCG 20 7.857425E-4 44.000004 14 TAGACGC 20 7.857425E-4 44.000004 24 TAGCGTA 20 7.857425E-4 44.000004 18 GACCGTA 20 7.857425E-4 44.000004 40 TAGCGGC 55 1.8189894E-12 44.000004 39 GTCTCCG 20 7.857425E-4 44.000004 19 GCACGTA 20 7.857425E-4 44.000004 27 GCACGAC 20 7.857425E-4 44.000004 30 CCGCTAG 20 7.857425E-4 44.000004 19 TACGCAC 20 7.857425E-4 44.000004 9 TGCGCGA 20 7.857425E-4 44.000004 12 GGACGTA 40 8.3164196E-9 44.000004 8 AATTCGC 20 7.857425E-4 44.000004 11 GCGATAG 20 7.857425E-4 44.000004 15 >>END_MODULE