##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527044_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1712940 Sequences flagged as poor quality 0 Sequence length 52 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.320359148598314 33.0 31.0 34.0 31.0 34.0 2 32.861616869242354 34.0 31.0 34.0 31.0 34.0 3 33.223310215185585 34.0 34.0 34.0 31.0 34.0 4 36.08195908788399 37.0 35.0 37.0 35.0 37.0 5 36.265980711525216 37.0 37.0 37.0 35.0 37.0 6 36.379173818113884 37.0 37.0 37.0 35.0 37.0 7 36.65659976414819 37.0 37.0 37.0 35.0 37.0 8 36.65351442549068 37.0 37.0 37.0 35.0 37.0 9 38.50910539773722 39.0 39.0 39.0 37.0 39.0 10 36.4810851518442 37.0 35.0 39.0 33.0 39.0 11 35.88559260686306 39.0 35.0 39.0 31.0 39.0 12 36.0095292304459 38.0 35.0 39.0 32.0 39.0 13 36.212955503403506 38.0 35.0 39.0 33.0 39.0 14 36.94411771574019 39.0 35.0 40.0 33.0 40.0 15 36.957678611043 39.0 35.0 40.0 33.0 40.0 16 32.023532639788904 37.0 33.0 40.0 3.0 40.0 17 33.52488703632351 37.0 33.0 40.0 17.0 40.0 18 35.54969934732098 37.0 34.0 40.0 29.0 40.0 19 36.55045185470595 38.0 35.0 40.0 31.0 40.0 20 36.8489818674326 39.0 35.0 40.0 33.0 40.0 21 37.03400878022581 39.0 35.0 40.0 33.0 40.0 22 37.12462783284879 39.0 35.0 40.0 33.0 40.0 23 37.119602554672085 39.0 35.0 40.0 33.0 40.0 24 37.089565308767384 39.0 35.0 40.0 33.0 40.0 25 37.03456571742151 39.0 35.0 40.0 33.0 40.0 26 36.97574988032272 39.0 35.0 40.0 33.0 40.0 27 36.8671056779572 38.0 35.0 40.0 33.0 40.0 28 36.79485387696008 38.0 35.0 40.0 33.0 40.0 29 36.57335166438988 38.0 35.0 40.0 33.0 40.0 30 36.535876913377 38.0 35.0 40.0 33.0 40.0 31 36.50474856095368 38.0 35.0 40.0 33.0 40.0 32 36.47016299461744 38.0 35.0 40.0 33.0 40.0 33 36.17475276425327 38.0 35.0 40.0 32.0 40.0 34 36.13058951276752 37.0 35.0 40.0 32.0 40.0 35 36.13659380947377 37.0 35.0 40.0 32.0 40.0 36 36.13509171366189 37.0 35.0 40.0 32.0 40.0 37 35.920796408514015 37.0 35.0 40.0 31.0 40.0 38 35.92755029364718 37.0 35.0 40.0 31.0 40.0 39 35.57805585718122 36.0 35.0 40.0 31.0 40.0 40 35.68015575560148 36.0 35.0 40.0 31.0 40.0 41 35.639623687928356 36.0 35.0 40.0 31.0 40.0 42 35.65600021016498 36.0 35.0 40.0 31.0 40.0 43 35.62221035179282 36.0 35.0 40.0 31.0 40.0 44 35.74305463121884 36.0 35.0 40.0 31.0 40.0 45 35.81361343654769 36.0 35.0 40.0 32.0 40.0 46 35.79081929314512 36.0 35.0 40.0 32.0 40.0 47 35.492553738017676 36.0 35.0 40.0 31.0 40.0 48 35.518702931801464 36.0 35.0 40.0 31.0 40.0 49 35.48768316461756 35.0 35.0 40.0 31.0 40.0 50 35.005367380060015 35.0 35.0 40.0 29.0 40.0 51 35.07249932863965 35.0 35.0 40.0 30.0 40.0 52 34.83334792812358 35.0 34.0 39.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 0.0 13 4.0 14 10.0 15 31.0 16 97.0 17 213.0 18 406.0 19 713.0 20 1201.0 21 1918.0 22 2727.0 23 4174.0 24 5978.0 25 8295.0 26 11253.0 27 14668.0 28 18736.0 29 24267.0 30 32325.0 31 44119.0 32 66110.0 33 119526.0 34 211242.0 35 190438.0 36 158811.0 37 230380.0 38 343829.0 39 221467.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 100.0 0.0 4 0.0 100.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 99.25461487267505 0.5828575431713895 0.1455392483099233 0.016988335843637254 8 98.80141744602847 0.915210106600348 0.1913668896750616 0.09200555769612478 9 91.7021028173783 4.082162831155791 2.7934428526393216 1.422291498826579 10 33.3357268789333 53.30846381075811 5.9893516410382155 7.366457669270378 11 27.543346527023715 23.035249337396525 35.12259623804687 14.298807897532898 12 28.030287108713676 18.18516702277955 29.91926162037199 23.865284248134785 13 23.89762630331477 20.32884981377048 31.896271906780154 23.877251976134602 14 23.091760365220033 23.733288965170992 29.80740714794447 23.36754352166451 15 22.135042675166673 27.728992258923256 29.66601282006375 20.469952245846322 16 25.200123763821264 36.460179574299154 23.21628311557906 15.123413546300512 17 25.670192767989537 29.146204770745033 25.721449671325324 19.462152789940106 18 23.260826415402757 28.913972468387684 26.5237544806006 21.301446635608954 19 22.125526871927796 29.897719709972325 27.442175441054562 20.534577977045316 20 22.775637208542037 30.255408829264308 26.933809707286887 20.03514425490677 21 21.68091118194449 29.398402746155732 31.056254159515216 17.864431912384553 22 21.224911555571126 28.33566849977232 30.7265870374911 19.71283290716546 23 19.384041472555957 32.42238490548414 30.612514156946535 17.581059465013368 24 21.248088082478077 32.58070919004752 27.626711968895584 18.544490758578817 25 20.715845271871753 35.4644646047147 25.601305358039394 18.21838476537415 26 20.763832942192955 35.8564806706598 24.84803904398286 18.531647343164384 27 19.59730054759653 32.6324331266711 27.055413499597186 20.714852826135182 28 20.30368839539038 33.3929384566885 25.633005242448654 20.67036790547246 29 21.48329772204514 32.84785223066774 25.373685009399043 20.295165037888076 30 20.705337022896305 31.715705161885417 27.583277873130406 19.99567994208787 31 21.180601772391327 33.12503648697561 25.92133991850269 19.77302182213037 32 21.915069996614008 33.25971721134424 26.168167011103716 18.657045780938038 33 22.38151949280185 33.132100365453546 26.220299601854123 18.26608053989048 34 20.675330134155313 32.55572290915035 28.156561233901943 18.612385722792393 35 20.047520637033404 35.42517542937873 26.131855172977453 18.39544876061041 36 20.303104603780632 34.88797039008955 25.83493876026014 18.973986245869675 37 21.11031326257779 34.97769916050766 24.90606792999171 19.005919646922834 38 21.922367391735843 34.99783997104394 24.262029026118835 18.81776361110138 39 20.810944925099538 34.47604703025208 24.964038436839587 19.748969607808796 40 20.40007239015961 35.77089682067089 24.429518838955246 19.39951195021425 41 18.738776606302615 36.636192744637874 25.15038471867082 19.474645930388686 42 19.90606792999171 34.877520520275084 25.301703503917246 19.914708045815964 43 19.44598176235011 35.3384823753313 25.814622812240945 19.400913050077644 44 20.399138323584012 35.05738671523813 25.159375109460925 19.384099851716933 45 20.280103214356604 35.513503099933445 23.962952584445457 20.24344110126449 46 19.073989748619333 37.24105923149673 24.448492066272024 19.23645895361192 47 19.099851716931123 35.68945789111119 26.65738438007169 18.553306011885997 48 19.608801242308544 36.58832183263862 25.105899798008103 18.696977127044732 49 19.8640933132509 35.76990437493433 24.480075192359337 19.88592711945544 50 19.1871285625883 36.28504209137506 24.456606769647507 20.071222576389133 51 18.545191308510514 36.626676941399 25.137366165773468 19.69076558431702 52 19.034642194122387 37.893096080423135 24.679498406248907 18.392763319205578 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 2.5 4 5.0 5 145.0 6 285.0 7 870.0 8 1455.0 9 3900.5 10 6346.0 11 15947.5 12 25549.0 13 32346.5 14 34436.0 15 29728.0 16 28895.5 17 28063.0 18 26499.0 19 24935.0 20 24249.5 21 23564.0 22 24741.0 23 25918.0 24 27346.0 25 28774.0 26 28835.5 27 28897.0 28 34342.5 29 39788.0 30 43906.0 31 48024.0 32 54081.5 33 60139.0 34 62406.0 35 64673.0 36 66670.5 37 68668.0 38 72622.0 39 78528.5 40 80481.0 41 80823.5 42 81166.0 43 83135.5 44 85105.0 45 87889.0 46 90673.0 47 91504.0 48 92335.0 49 90834.5 50 89334.0 51 89565.0 52 89796.0 53 92775.0 54 95754.0 55 94195.5 56 92637.0 57 83527.5 58 74418.0 59 72518.0 60 70618.0 61 62765.5 62 54913.0 63 44540.5 64 29977.5 65 25787.0 66 20340.0 67 14893.0 68 11740.5 69 8588.0 70 7044.0 71 5500.0 72 4362.0 73 3224.0 74 2331.5 75 1439.0 76 938.5 77 438.0 78 596.0 79 754.0 80 528.5 81 303.0 82 177.0 83 51.0 84 37.0 85 23.0 86 14.5 87 6.0 88 5.0 89 2.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1712940.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.08880362714995 #Duplication Level Percentage of deduplicated Percentage of total 1 74.49410976676882 7.515564448162837 2 9.075199258156315 1.8311580638559195 3 3.4206835668698874 1.0353181433030745 4 1.67451931895382 0.6757558631517585 5 0.9383217908065175 0.47332721432613145 6 0.5681468883726634 0.343915343290085 7 0.36851777952567005 0.26025324575234776 8 0.27133131964949664 0.2189926721471379 9 0.19030502901146398 0.1727955060260161 >10 3.5830493106307 10.191213356797455 >50 2.5779674821678817 18.905721323319334 >100 2.7355895465146802 49.376467726720676 >500 0.07685703964017435 4.957340506181733 >1k 0.024750572087513772 3.614986191415486 >5k 6.513308444082572E-4 0.4271903955499986 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TTTAGGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 6501 0.3795229254965148 No Hit TTTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 3190 0.18622952350928812 No Hit TTTAGGGGGCAGACTACCCAGATGCTTACACCACATGAAACACTGTCTCTTC 2249 0.13129473303209685 No Hit TTTAGGGGGAGCATTGCTTCTGTGTAAATTATGTACTGCAAAAATTTTTTTA 2203 0.12860929162726073 No Hit TTTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 2079 0.12137027566639812 No Hit TTTAGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 1947 0.11366422641773792 No Hit TTTAGGGGATGGGCCAGGCCACGGAACACAGGAGACCTTCGAGTCAGCCCTG 1946 0.11360584725676323 No Hit TTTAGGGGGGTCGCCTGCCTCTGAAGTGGCATGGTCAGACGCGCCAGCATTG 1803 0.10525762723738133 No Hit TTTAGGGGGGTGTTTGTGTATTTATGCTTTGATTCATAGTAACTTCTCATGT 1797 0.10490735227153315 No Hit TTTAGGGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 1791 0.10455707730568496 No Hit TTTAGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1720 0.10041215687648136 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 5.254124487722862E-4 0.0 0.0 0.0 0.0 8 0.0015178581853421602 0.0 0.0 0.0 0.0 9 0.003094095531659019 0.0 0.0 0.0 0.0 10 0.012434761287610775 0.0 0.0 0.0 0.0 11 0.016579681716814367 0.0 0.0 0.0 0.0 12 0.019440260604574593 0.0 0.0 0.0 0.0 13 0.02527817670204444 0.0 0.0 0.0 0.0 14 0.037946454633554005 0.0 0.0 0.0 0.0 15 0.0458276413651383 0.0 0.0 0.0 0.0 16 0.05452613635036837 0.0 0.0 0.0 0.0 17 0.061356498184408095 0.0 0.0 0.0 0.0 18 0.06748631008675143 0.0 0.0 0.0 0.0 19 0.07431667192079115 0.0 0.0 0.0 0.0 20 0.0802713463402104 0.0 0.0 0.0 0.0 21 0.08733522481814891 0.0 0.0 0.0 0.0 22 0.09270610762782118 0.0 0.0 0.0 0.0 23 0.09860240288626572 0.0 0.0 0.0 0.0 24 0.10368138989106448 0.0 0.0 0.0 0.0 25 0.11127068081777529 0.0 0.0 0.0 0.0 26 0.11705021775427044 0.0 0.0 0.0 0.0 27 0.12341354630051257 0.0 0.0 0.0 0.0 28 0.13333800366621132 0.0 0.0 0.0 0.0 29 0.1421532569733908 0.0 0.0 0.0 0.0 30 0.15131878524641842 0.0 0.0 0.0 0.0 31 0.16229406750966174 0.0 0.0 0.0 0.0 32 0.1718098707485376 0.0 0.0 0.0 0.0 33 0.18190946559716042 0.0 0.0 0.0 0.0 34 0.19189230212383387 0.0 0.0 0.0 0.0 35 0.20368489264072298 0.0 0.0 0.0 0.0 36 0.21244176678692775 0.0 0.0 0.0 0.0 37 0.22318353240627226 0.0 0.0 0.0 0.0 38 0.2338669188646421 0.0 0.0 0.0 0.0 39 0.24145620979135288 0.0 0.0 0.0 0.0 40 0.25032984225950705 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTATCG 35 1.0199619E-7 46.000004 41 GTCGCAA 35 1.0199619E-7 46.000004 40 CGTTCGC 70 0.0 46.000004 46 AACGAGC 35 1.0199619E-7 46.000004 17 CGTCGTT 35 1.0199619E-7 46.000004 19 CGCGTCA 70 0.0 46.000004 28 AATCGCG 70 0.0 46.000004 25 AACGTAT 60 0.0 46.0 40 CGGGTAC 25 3.4178625E-5 46.0 36 TACCCCG 25 3.4178625E-5 46.0 30 CGAACGG 20 6.3123263E-4 46.0 12 GCGAACC 25 3.4178625E-5 46.0 29 TTTCGCA 30 1.8619412E-6 46.0 43 CGTGACG 45 3.110472E-10 46.0 19 CGTCTCG 20 6.3123263E-4 46.0 42 CCGTCTA 30 1.8619412E-6 46.0 31 ATCGTTA 20 6.3123263E-4 46.0 10 ATCCGCG 50 1.6370905E-11 46.0 10 ATCCGAC 20 6.3123263E-4 46.0 41 CCCGTAG 20 6.3123263E-4 46.0 37 >>END_MODULE