##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527043_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1663982 Sequences flagged as poor quality 0 Sequence length 52 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.27480405437078 33.0 31.0 34.0 31.0 34.0 2 32.821145901818646 34.0 31.0 34.0 31.0 34.0 3 33.18780551712699 34.0 34.0 34.0 31.0 34.0 4 36.08950817977598 37.0 35.0 37.0 35.0 37.0 5 36.287548182612554 37.0 37.0 37.0 35.0 37.0 6 36.36893127449696 37.0 37.0 37.0 35.0 37.0 7 36.66300777292062 37.0 37.0 37.0 35.0 37.0 8 36.680452072197895 37.0 37.0 37.0 35.0 37.0 9 38.449530103090055 39.0 39.0 39.0 37.0 39.0 10 36.438319044316586 37.0 35.0 39.0 33.0 39.0 11 35.75758932488452 39.0 35.0 39.0 31.0 39.0 12 35.93960271204857 38.0 35.0 39.0 31.0 39.0 13 36.100041947569146 38.0 35.0 39.0 32.0 39.0 14 36.8601553382188 39.0 35.0 40.0 33.0 40.0 15 37.04702695101269 39.0 35.0 40.0 33.0 40.0 16 37.15782021680523 39.0 35.0 40.0 33.0 40.0 17 37.154610446507235 39.0 35.0 40.0 33.0 40.0 18 37.17522124638367 39.0 35.0 40.0 33.0 40.0 19 37.14898598662726 39.0 35.0 40.0 33.0 40.0 20 37.106085883140565 39.0 35.0 40.0 33.0 40.0 21 32.836090174052366 37.0 33.0 40.0 10.0 40.0 22 33.529624719498166 37.0 34.0 40.0 16.0 40.0 23 35.61433056367196 37.0 34.0 40.0 29.0 40.0 24 36.45893585387342 38.0 35.0 40.0 32.0 40.0 25 36.75700278007815 38.0 35.0 40.0 33.0 40.0 26 36.8670838987441 38.0 35.0 40.0 33.0 40.0 27 36.834626215908585 38.0 35.0 40.0 33.0 40.0 28 36.773936256522006 38.0 35.0 40.0 33.0 40.0 29 36.72647901239316 38.0 35.0 40.0 33.0 40.0 30 36.631127019402854 38.0 35.0 40.0 33.0 40.0 31 36.501240398033154 38.0 35.0 40.0 33.0 40.0 32 36.48600285339625 38.0 35.0 40.0 33.0 40.0 33 36.21002030070037 38.0 35.0 40.0 32.0 40.0 34 36.146823102653755 37.0 35.0 40.0 32.0 40.0 35 36.14876422942075 37.0 35.0 40.0 32.0 40.0 36 36.08082960032019 37.0 35.0 40.0 32.0 40.0 37 36.06602595460768 37.0 35.0 40.0 32.0 40.0 38 36.00962570508575 37.0 35.0 40.0 32.0 40.0 39 35.89773507165342 36.0 35.0 40.0 32.0 40.0 40 31.159717472905356 35.0 32.0 40.0 8.0 40.0 41 32.010043377873075 35.0 31.0 40.0 13.0 40.0 42 33.934222846160594 35.0 32.0 40.0 23.0 40.0 43 34.90881511939432 35.0 34.0 40.0 29.0 40.0 44 35.47250871704141 36.0 34.0 40.0 31.0 40.0 45 35.70710199990144 36.0 35.0 40.0 31.0 40.0 46 35.76551008364273 36.0 35.0 40.0 32.0 40.0 47 35.711209616450176 36.0 35.0 40.0 32.0 40.0 48 35.63523343401551 36.0 35.0 40.0 31.0 40.0 49 35.54252089265389 35.0 35.0 40.0 31.0 40.0 50 35.43972170372035 35.0 35.0 40.0 31.0 40.0 51 35.25952263906701 35.0 35.0 40.0 31.0 40.0 52 34.95406260404259 35.0 34.0 39.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 3.0 13 1.0 14 10.0 15 28.0 16 108.0 17 232.0 18 459.0 19 787.0 20 1216.0 21 2003.0 22 2954.0 23 4459.0 24 6256.0 25 8742.0 26 11714.0 27 15094.0 28 19689.0 29 26288.0 30 35808.0 31 55276.0 32 85565.0 33 81340.0 34 221680.0 35 204548.0 36 187748.0 37 139931.0 38 328097.0 39 223945.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 100.0 0.0 4 0.0 100.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 99.2528765335202 0.588227516884197 0.144472716651983 0.014423232943625592 8 98.83099696991916 0.9017525429962583 0.17325908573530244 0.09399140134929344 9 91.68212156141112 4.069455078240029 2.8440812460711715 1.4043421142776786 10 33.41304172761484 53.21415736468303 6.025185368591727 7.347615539110398 11 27.649517843342053 23.010405160632747 35.09238681668432 14.247690179340882 12 28.152407898643133 18.13391010239293 29.867510586052013 23.846171412911918 13 24.05795254996749 20.29463059095591 31.872159674804173 23.775257184272427 14 23.124048216867727 23.735352906461728 29.845575252616914 23.295023624053627 15 22.02031031585678 27.613940535414443 29.856392677324635 20.50935647140414 16 26.06001747615058 30.103871315915676 26.419276170054722 17.416835037879018 17 25.69222503608813 29.141661388164053 25.714340659935026 19.45177291581279 18 23.3025357245451 29.025734653379665 26.433819596606213 21.237910025469027 19 22.154927156663952 29.99581726244635 27.345848693074803 20.503406887814894 20 22.810703481167465 30.33842914166139 26.91687770660981 19.93398967056134 21 27.365620541568358 27.334430300327767 28.850492373114612 16.449456784989263 22 21.284004274084694 28.38065555997601 30.631581351240577 19.703758814698716 23 19.3666758414454 32.4734882949455 30.610246985844796 17.549588877764304 24 21.390676101063594 32.60035264804547 27.52301407106567 18.485957179825263 25 20.72943096740229 35.558918305606674 25.525636695589256 18.186014031401783 26 20.82149927102577 35.87454671985634 24.82809309235316 18.475860916764724 27 19.566257327302818 32.693682984551515 27.02192691988255 20.718132768263118 28 20.252562828203672 33.55685337942357 25.559711583418572 20.630872208954184 29 21.31134831987365 33.021090372371816 25.387954917781563 20.27960638997297 30 20.687483398257914 31.73027112072126 27.585394553546855 19.996850927473975 31 21.218919435426585 33.13785846241125 25.88705887443494 19.75616322772722 32 21.925838140076035 33.31682674452007 26.156292556049284 18.601042559354607 33 22.27770492709657 33.258653038314115 26.228468817571343 18.235173217017973 34 20.588203478162626 32.66675961639008 28.14375395887696 18.601282946570336 35 20.03807733497117 35.45537151243223 26.101724658079235 18.40482649451737 36 20.386578700971526 34.96690469007477 25.78910108402615 18.857415524927553 37 20.973544184973157 35.11432215011941 24.974849487554554 18.937284177352883 38 21.957569252552013 35.06323986677741 24.1512227896696 18.827968091000987 39 20.429968593410265 34.746950387684485 24.95844306008118 19.864637958824076 40 22.121813817697547 38.104258339333 22.268149535271416 17.505778307698037 41 18.80753517766418 36.77491703636217 25.04967000844961 19.367877777524036 42 19.890900262142257 35.03541504655699 25.192700401807233 19.880984289493515 43 19.39894782515676 35.4691336805326 25.732009120290968 19.39990937401967 44 20.39324944620795 35.15542836400874 25.154899512134143 19.296422677649158 45 20.322455411176325 35.616851624596904 23.87946504229012 20.181227921936657 46 18.974664389398445 37.36747152312946 24.409158272144772 19.24870581532733 47 18.811681857135472 35.96348998967537 26.60371326132134 18.621114891867823 48 19.512290397372087 36.665841337226 25.070884180237528 18.750984085164383 49 19.900395557163478 35.87400584862096 24.342270529368708 19.883328064846857 50 19.00272959683458 36.64138193802577 24.450324582838036 19.90556388230161 51 18.63193231657554 36.74522921521988 25.04822768515525 19.574610783049337 52 19.030674610662857 37.937669998834124 24.625867347122746 18.405788043380277 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 4.0 4 8.0 5 123.0 6 238.0 7 801.5 8 1365.0 9 3599.0 10 5833.0 11 14543.5 12 23254.0 13 29668.5 14 32591.0 15 29099.0 16 28568.0 17 28037.0 18 26437.5 19 24838.0 20 24302.0 21 23766.0 22 24417.0 23 25068.0 24 26695.0 25 28322.0 26 27932.0 27 27542.0 28 32610.5 29 37679.0 30 41761.0 31 45843.0 32 51755.5 33 57668.0 34 59845.5 35 62023.0 36 64748.0 37 67473.0 38 71228.0 39 76743.0 40 78503.0 41 78768.5 42 79034.0 43 80837.5 44 82641.0 45 85269.5 46 87898.0 47 88313.0 48 88728.0 49 87831.0 50 86934.0 51 87250.5 52 87567.0 53 89828.0 54 92089.0 55 91130.5 56 90172.0 57 81550.0 58 72928.0 59 71173.0 60 69418.0 61 62277.5 62 55137.0 63 44684.0 64 29512.0 65 24793.0 66 19672.0 67 14551.0 68 11476.0 69 8401.0 70 7004.5 71 5608.0 72 4345.0 73 3082.0 74 2332.0 75 1582.0 76 1008.5 77 435.0 78 586.0 79 737.0 80 525.5 81 314.0 82 185.5 83 57.0 84 36.5 85 16.0 86 8.5 87 1.0 88 0.5 89 0.0 90 0.0 91 1.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1663982.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.791363891137175 #Duplication Level Percentage of deduplicated Percentage of total 1 74.8415680082872 7.328010265524304 2 8.29831444788968 1.625036328847379 3 3.176153693481918 0.9329662976118248 4 1.564209115954189 0.612629626245658 5 0.9482125523799073 0.46421470732478204 6 0.5556166613560886 0.32641469491897185 7 0.3892240421827606 0.2667723962533514 8 0.28606413434398453 0.2240766428452083 9 0.23064563824738535 0.2032501836585363 >10 3.9964032615871745 11.047182100038093 >50 2.814219047448196 20.019787687659672 >100 2.802156081284147 48.60025878175464 >500 0.07521614196407181 4.851452271829156 >1k 0.021287587348322208 3.0623893592079523 >5k 7.095862449440736E-4 0.4355586562804785 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TTTAGGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 6269 0.3767468638482868 No Hit TTTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 3029 0.18203321910934134 No Hit TTTAGGGGGAGCATTGCTTCTGTGTAAATTATGTACTGCAAAAATTTTTTTA 2180 0.13101103257126578 No Hit TTTAGGGGGCAGACTACCCAGATGCTTACACCACATGAAACACTGTCTCTTC 2119 0.12734512753142763 No Hit TTTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 1978 0.11887147817704759 No Hit TTTAGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 1941 0.11664789643157199 No Hit TTTAGGGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 1831 0.11003724799907692 No Hit TTTAGGGGGGTCGCCTGCCTCTGAAGTGGCATGGTCAGACGCGCCAGCATTG 1720 0.10336650276265007 No Hit TTTAGGGGGGTGTTTGTGTATTTATGCTTTGATTCATAGTAACTTCTCATGT 1717 0.10318621235085475 No Hit TTTAGGGGATGGGCCAGGCCACGGAACACAGGAGACCTTCGAGTCAGCCCTG 1703 0.10234485709580993 No Hit TTTAGGGGGGTTGATTTCAGAAGAGACTAGCTTTGTGGAATATAGATGCTTG 1667 0.10018137215426609 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 4.206776275224131E-4 0.0 0.0 0.0 0.0 8 0.002343775353339159 0.0 0.0 0.0 0.0 9 0.004447163490951225 0.0 0.0 0.0 0.0 10 0.014122748923966725 0.0 0.0 0.0 0.0 11 0.019050686846372136 0.0 0.0 0.0 0.0 12 0.023197366317664492 0.0 0.0 0.0 0.0 13 0.029086853102978278 0.0 0.0 0.0 0.0 14 0.03948360018317506 0.0 0.0 0.0 0.0 15 0.04699570067464672 0.0 0.0 0.0 0.0 16 0.05498857559757257 0.0 0.0 0.0 0.0 17 0.06069777197109103 0.0 0.0 0.0 0.0 18 0.06544541948170113 0.0 0.0 0.0 0.0 19 0.07121471265915136 0.0 0.0 0.0 0.0 20 0.07800565150344174 0.0 0.0 0.0 0.0 21 0.08389513828875553 0.0 0.0 0.0 0.0 22 0.08948414105441044 0.0 0.0 0.0 0.0 23 0.09561401505545132 0.0 0.0 0.0 0.0 24 0.10018137215426609 0.0 0.0 0.0 0.0 25 0.10637134295923874 0.0 0.0 0.0 0.0 26 0.113462765823188 0.0 0.0 0.0 0.0 27 0.12061428549106902 0.0 0.0 0.0 0.0 28 0.1320927750420377 0.0 0.0 0.0 0.0 29 0.13990535955316824 0.0 0.0 0.0 0.0 30 0.14976123539797906 0.0 0.0 0.0 0.0 31 0.15949691763492635 0.0 0.0 0.0 0.0 32 0.1703744391465773 0.0 0.0 0.0 0.0 33 0.18041060540318346 0.0 0.0 0.0 0.0 34 0.18984580362047185 0.0 0.0 0.0 0.0 35 0.20084351873998638 0.0 0.0 0.0 0.0 36 0.210218620153343 0.0 0.0 0.0 0.0 37 0.22007449599815382 0.0 0.0 0.0 0.0 38 0.22975008143116932 0.0 0.0 0.0 0.0 39 0.2366011170793915 0.0 0.0 0.0 0.0 40 0.2453151536494986 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGT 30 1.8619085E-6 46.0 38 TCCGCTA 40 5.6134013E-9 46.0 28 CGAGTAC 25 3.4178207E-5 46.0 18 CAACGGG 40 5.6134013E-9 46.0 29 CGACGGT 25 3.4178207E-5 46.0 41 CCGATAT 20 6.3122745E-4 46.0 38 AACCCGC 20 6.3122745E-4 46.0 25 ACGCAAT 40 5.6134013E-9 46.0 16 ACCGCTA 20 6.3122745E-4 46.0 19 TTTCGTC 20 6.3122745E-4 46.0 45 CGGCACG 20 6.3122745E-4 46.0 46 GAATCGT 20 6.3122745E-4 46.0 11 CGTCTAA 20 6.3122745E-4 46.0 21 CGTTCGC 55 1.8189894E-12 46.0 46 TCTAGCG 25 3.4178207E-5 46.0 45 TCGGCGA 25 3.4178207E-5 46.0 23 AGTATCG 55 1.8189894E-12 46.0 40 TACGCAC 20 6.3122745E-4 46.0 9 GTTAACG 20 6.3122745E-4 46.0 15 TATTCGC 30 1.8619085E-6 46.0 17 >>END_MODULE